Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139410689
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Entry
139410689 CDS
T10872
Name
(RefSeq) ARF GTPase-activating protein GIT2a isoform X1
KO
K12487
G protein-coupled receptor kinase interactor 2
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
139410689
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139410689
Membrane trafficking [BR:
ocla04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
139410689
Endosome - Golgi transport
Arf GTPase associated proteins
139410689
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIT1_C
GIT_CC
ArfGap
GIT_SHD
Ank_2
Ank
Ank_5
Ank_4
Shugoshin_N
TTRAP
Ank_3
Motif
Other DBs
NCBI-GeneID:
139410689
NCBI-ProteinID:
XP_071012190
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Position
6:complement(18204758..18230557)
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AA seq
808 aa
AA seq
DB search
MSKRSRNSELCADCSVPEPRWASVNRGVLICDECCSVHRSLGRHSSQVRHLTHTPWAPTQ
LQMVQMLYNNSANSIWEHSLLDPASVMSGKRKANPQDKVHPNKTEFIKAKYQMLAFVHRM
PCRDDDSFTAKDLSKQLHSSVRTGNLETCLRLLSLGAQANFFHPEKGNTPLHVAAKAGQV
FQAELLTVYGADPGAPDTSAKTPIDYARQAGYHDLADRLVEIQYELTDRLAFYLCGRKPD
HKNGQHFIVPQMADSSLDLSELAKAAKKKLQSLSNHLFEELAMDVYDEVDRRETDAVWLA
TQNHSTLVTDTTVVPFLPVNPEYSSTRNQGRQKLARFNAHEFATLVIDILSDAKRRQLGN
STTSPKENVELILKSVSIRRGSEGLDNDQPDYDSVASDEDTDQEPPSGKDRTKSLDSDLS
DGPVTVQEFLEVKHALSASEAKIKQLMKVNSNLSGELRLMQKKLHSLQSENTSLRRQGPT
THIYQVPISSGSEYTDPPSSSPSAMKRRQSARASRPMSMSIYETGSGLKPYLPKGETPYP
EEGIPTLQPFLPPHMGRGAFVTSSSLPSFPSTLSWSRDESAQRASKMEKQSSMSDGDYDN
TTNDSELEDSGVGRRGRLRSSGWLGEGSSIPELDDLEAEPDSALPSTEDVIRKTEQITKN
IQDLLRAAQENKHDRPCEGVRRLRHSLGCFSSLVPWAEKAPSPLQPLNLRSLDPAACFIP
CSERIHVAVTEMAALFPKRPRSETVRGPLRLLTSSAFRLQGECQKAVPPEGSPGPDMQLV
TQQVIQCAYDIAKAAKQLVTITTKENSN
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaacgatcaaggaatagtgagctatgcgcggattgcagtgtgccagagcctcgt
tgggcttctgtgaacaggggcgtgttgatctgcgacgagtgctgtagtgttcatcggagt
ctgggcagacacagctcccaagtgcgtcacctgactcacacaccatgggctcctacacag
ctacagatggttcagatgttatacaacaacagtgcaaattcgatatgggaacactctcta
ctggacccagcgtctgtgatgagtgggaaacgcaaggccaaccctcaggacaaagtacac
ccaaataagacagagttcataaaggccaaataccaaatgctggcttttgtccaccggatg
ccttgtcgagatgacgacagcttcactgccaaggacttaagcaagcaacttcactccagt
gtccgaactggtaacctggagacatgtttgaggttactctctctgggagcccaggccaac
ttctttcacccagaaaaagggaatacgccgctgcatgtggctgccaaggcaggccaggtg
tttcaggccgagctgctgacagtctacggggccgaccccggcgcccccgacaccagcgcc
aagactcccattgactatgcaaggcaagctggctaccatgacctggctgataggctggtg
gagattcagtatgaacttaccgacagactggctttctatctctgtggaagaaagcctgat
cataaaaatggccaacacttcatcgtcccacagatggccgacagcagtttagatttatca
gaactggcaaaggcagccaagaagaaactccagtctctcagtaatcatttgtttgaggag
ctggcgatggacgtgtatgacgaggtggacagacgggagacggatgcagtatggctggcg
acacagaaccacagcacgctggtgacagacaccaccgtggtgcctttccttcctgtgaac
ccagagtactcatcaacacgaaaccagggacggcaaaaacttgcgagattcaatgcacat
gaatttgcaacacttgtcatcgacatattaagtgacgcgaagcgtcgacagctgggaaac
tctacgacgagtcccaaagaaaacgttgaacttatcctaaaaagcgtgagcatccggcgc
ggcagtgagggtctggacaatgaccagccggactacgacagtgtggcctctgacgaggac
acggatcaggagccaccctcgggcaaggaccggaccaagagtctggactcggacctgtca
gacggacctgtcacggtgcaggagttcctggaggtgaagcacgccctgtctgcctcggag
gccaagatcaagcagctgatgaaggtcaacagcaacttaagcggcgaactgcgactgatg
cagaaaaagctgcattctctgcaaagcgagaacacgtctctcaggcgacagggcccaacc
acccatatctatcaggtccccatcagcagtgggtcagagtacactgaccctccttcctcc
agcccctcggccatgaagcgccggcagtcagcgcgggccagccggcccatgtccatgtct
atttatgagactggctcgggcctgaagccctacctccccaagggggagaccccctaccca
gaggagggtatccccaccctgcaacccttcctcccacctcatatgggaaggggtgctttt
gtgacctcttcatccctcccctccttcccatccaccctgtcctggtcacgggacgaaagt
gctcaaagggcctctaagatggagaaacagagcagcatgtcagacggtgactatgacaac
acaaccaatgactctgagttggaggactcaggtgtgggcaggagggggaggcttaggagc
agtggctggcttggggagggcagctccatccctgaactggatgatcttgaagccgagcca
gactctgcgctccccagcaccgaggatgttattcgcaagacagagcagatcaccaagaac
atccaggatctgctccgcgctgcacaggagaacaagcacgacagaccttgtgagggtgtc
cgccggctcaggcacagtctaggctgtttcagcagcctggtgccctgggccgagaaggcc
ccctctcccctgcagcccctcaacctgcgctccctcgatcctgccgcctgctttataccc
tgctccgaaagaatacatgtggctgtgacggaaatggctgccctctttcccaagagacca
cgttcggagacagtgcgaggtcccctgcgcctgttgacgtccagcgccttccggctccag
ggagagtgtcagaaggcagtgcccccagagggaagtccagggcctgacatgcagctggtc
acccagcaggttatccagtgtgcctatgacatcgccaaggcggccaagcagcttgtcacc
attaccaccaaggagaacagcaactga
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