Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139410785
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Entry
139410785 CDS
T10872
Name
(RefSeq) tubulin beta-1 chain
KO
K07375
tubulin beta
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04145
Phagosome
ocla04517
IgSF CAM signaling
ocla04540
Gap junction
ocla04814
Motor proteins
ocla05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
139410785
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
139410785
09144 Cellular community - eukaryotes
04540 Gap junction
139410785
09142 Cell motility
04814 Motor proteins
139410785
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
139410785
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ocla03036
]
139410785
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ocla04812
]
139410785
04147 Exosome [BR:
ocla04147
]
139410785
Chromosome and associated proteins [BR:
ocla03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
139410785
Cytoskeleton proteins [BR:
ocla04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
139410785
Exosome [BR:
ocla04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
139410785
Exosomal proteins of colorectal cancer cells
139410785
Exosomal proteins of bladder cancer cells
139410785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Misat_Tub_SegII
Tubulin_3
Tubulin_2
Motif
Other DBs
NCBI-GeneID:
139410785
NCBI-ProteinID:
XP_071012389
LinkDB
All DBs
Position
6:complement(22028935..22031663)
Genome browser
AA seq
445 aa
AA seq
DB search
MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRINVYYNEASGGKYV
PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV
EPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPSYGDLNHLVSATMSGVTTCL
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRSLTVPELTQQMFDAKNMM
AACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
LKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
EYQQYQDATAEEEGEFEEEGEEELA
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgagggaaatcgtgcatcttcaggctggacagtgtggaaaccagatcggcgctaagttc
tgggaggtgatcagtgacgaacatggcattgacccaacgggtacataccatggggacagt
gaccttcagctcgacaggatcaacgtctactacaatgaagcctcaggtggtaaatacgtg
cctcgtgccgtgcttgtcgacttggagccagggaccatggactctgtgagatctggaccc
ttcggccagatcttcagacctgacaactttgtgttcggccagagtggtgctggaaacaac
tgggccaagggccattacacagagggagctgagctggtggactcagtcctggatgttgtg
aggaaggaagctgagagctgtgactgtctgcaaggtttccagctcacccactcactagga
ggtggaaccggctctggcatgggcaccctgctcatcagcaagatccgtgaagagtacccc
gatcgcatcatgaacaccttcagcgtggtgccctcacccaaagtatcagacactgtggtg
gagccctacaatgccaccctgtcagtccaccagctagtggagaacactgacgagaccttc
tgcattgacaacgaggctctctacgacatctgcttccgtaccctcaaactcactactccc
tcctacggagacctcaaccacctggtgtcggcaactatgagcggtgtcacaacctgcctg
cggttcccaggacagctcaacgctgacctccgtaagcttgctgtcaacatggtgcccttc
ccccgtctccacttcttcatgcctggcttcgcccccctcaccagcaggggaagccagcag
taccgctccctcactgtgcctgagctcacccagcagatgttcgatgccaagaacatgatg
gccgcctgcgacccccgccacggacgctaccttacagtggctgccatcttccgtggacgc
atgtccatgaaggaggtggatgagcagatgctgaacgtgcagaacaagaacagcagctac
ttcgttgaatggatccccaacaacgtcaagactgctgtctgtgacattcctccccgtggc
ctcaagatggctgctaccttcatcggcaacagcacagccatccaggagctgttcaagcgt
atctcagagcagtttacagccatgttcaggcgtaaggctttcctccattggtacaccgga
gaaggtatggatgagatggagttcactgaggctgagagcaacatgaatgacctggtgtct
gagtaccagcagtaccaagatgccactgctgaggaggagggagagtttgaagaggaggga
gaagaggagctggcctaa
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