Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139410787
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Entry
139410787 CDS
T10872
Name
(RefSeq) protein crumbs homolog 1-like
KO
K16681
protein crumbs
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF
hEGF
EGF_TEN
Laminin_G_2
Laminin_G_1
EGF_CA
EGF_DL_JAG
Laminin_G_3
EGF_3
EGF_MSP1_1
EGF_Teneurin
EGF_2
cEGF
TMEM154
Insulin_TMD
Motif
Other DBs
NCBI-GeneID:
139410787
NCBI-ProteinID:
XP_071012393
LinkDB
All DBs
Position
6:22055600..22080835
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AA seq
1481 aa
AA seq
DB search
MEFGRFLFKSQRTLLLGMIMFKLGILCTAADQCLSSPCQNGGTCLDYMGNYTCLCPRWPV
HYTGKDCKELYDPCVYDAPCTNCTSTLGTGVYTCHCLVGFAGTNCTLNIGRCLSNPCKGG
VRSHCVDRVDGYTCHCPPGYGGEECQERIRDCSEEPCHNDATCVGTPDGYVCQCGPGLQG
RDCEENIDDCKSLPCQNGAICKDGVNGYQCFCVPGFQGYHCDLDINECASRPCENNGTCA
NEVDHYECNCLLGFKGVNCEVEIDDCEEQPCQNGASCHDHVGLYTCECVSGYEGHECELD
IDECASGPCLNEGNCTDLVNSYECDCTGTGFTGEKCEVDIPECASDPCQNGATCVEGINQ
YGCFCWPGYEGKNCQVDIDECELEPCENGGECFQRSELLYYGVLSGLEDREFNYEDAAGF
LCHCQPGFAGESCEVNVDECESAPCQNKGSCEDLVNSYMCVCLPGFTGVHCEVDIDECES
EPCQNGGSCHDGSNSYTCHCVEAEPGEEPWGGHNCDVRLIGCREHLCENGAPCVPILSQE
DGNEDSDGDEDEQEHGHTCLCPPGFTGKHCGIPTTFSFNTEGYILIQLPPTANRSRAEVE
PHHHHVQLRFRTTLPDMLLFYGGAEHYFVSLEIVGSLLKARAGSGKKLQATYHLPVNDGD
WHEAKVTMDEKLVLMVKGPVCDNDEGCTVENEGHNQLVFFQHGSFPEVYVGGAPQKYLAN
TDSRKGFIGCVEDLQVDHQRVLPQDFSREHVQDMELGCNKTDWCHPDPCHHRGQCIDLWT
SFSCECHRPYHGSLCEEEHPSWTFSNEETVSYAAFNINTTDGENFNISFFLRSLNPSGLL
LQLRRGRRAYLILYLREGTLVFNSPPTTLFSNNIYFTSGQRELVTITIRQGQVGFNQAGT
QLSLGRVRMERGDVVYIGGLPPGESTAPWGGHFKGCLQDITLDHMQLYPNHTKEECHTYE
AYQCYLPNKAENVLDGCVSDEACKTGPCQNGGTCMVTWNDFECTCHMNFSGRRCDTRVWC
VSDPCAMGSQCVDLVDGYECLTNATFESNALQFTANGSLVASVTSVSVDIRTRKENGVLL
RATNGAEVFCLGLLNSSLLVKLLSGNSLELQAFTSDLPISDGAWHHLHLAMTDPLQPVSR
WRLTVDGRRVGSTMGTAGNLNFLNDTTVWMAENYTGCLGELRVGGVYLPLVDDQDAPQAA
RFIRQGGQKPKMGCVGADVCQSQPCLNQGFCQDLWNLLNCSCTPGWEGQFCQRNTDECAS
GPCAHGTCTDLLADYRCECHKGWGGRDCDEEVDDCLEHSCLNGGSCLDGTGNYHCVCLPG
YSGRRCQQRFPPQQCDEDTQCDNGGVCMDGIWGANCTCKPGYTGDWCEAEIDECESSSCL
NGATCLDRLNSFQCMCLPGFSGTQCESNRQEQRERVPWLVVAIPLASLCVLLAVVALVFM
VLTARKKRQSEGTYSPSAQEVAGARLEMGSVLKVPPEERLI
NT seq
4446 nt
NT seq
+upstream
nt +downstream
nt
atggagtttggaaggtttcttttcaagtcccaaagaactttgctgctcggcatgataatg
ttcaaactgggtatactgtgcacagcagcagaccagtgtctgtcatccccctgtcagaat
ggaggtacttgtttggactatatgggtaactacacatgtctctgccccagatggccagtc
cactacacgggcaaggactgtaaggagctgtacgacccctgtgtctacgatgccccttgc
accaactgtaccagcacactgggcacaggggtctacacctgccactgccttgtcggcttc
gcagggaccaactgcacactcaacatcggcaggtgtttgagcaacccatgtaaagggggt
gtcaggtctcactgtgtggacagggtggacggctacacctgccactgtccccctggctat
ggaggagaagagtgccaggagaggatcagggactgctctgaggagccgtgccataacgat
gccacctgtgttggcacaccggatgggtacgtgtgccagtgtggcccgggtctccagggg
agggactgtgaggagaacatagatgactgtaagtcactcccctgtcagaacggagccatc
tgtaaagacggcgtcaacggataccagtgcttctgtgtgcctggtttccaaggctaccac
tgcgacctggacattaacgagtgtgcgtcgcggccgtgtgagaacaacgggacctgtgcc
aatgaggtggaccactatgagtgcaactgtcttcttggattcaaaggggtgaactgtgaa
gtggagatagatgactgtgaggagcagccctgccagaatggagccagctgccatgaccat
gtgggtctgtacacatgtgagtgtgtgtccgggtacgagggccatgaatgtgagctggac
attgacgagtgtgccagtggaccctgtctcaacgagggcaactgcacagacctggtgaac
agctatgagtgtgactgcactgggacaggctttacaggagagaaatgtgaagtggacatc
ccagagtgtgcttctgacccctgccagaatggagctacctgcgtagagggaatcaaccaa
tatggctgtttctgctggccaggttatgaagggaagaactgccaggtggatatagacgag
tgtgagctggagccctgtgagaatggaggagagtgtttccagcgctcagagttgctgtac
tatggggtgctgtctgggctggaagacagggagttcaactatgaggatgcagctgggttc
ctttgccactgtcaacctgggtttgctggagagagctgtgaagtgaatgtggacgagtgt
gagtccgccccgtgtcagaacaaagggagctgtgaggacctggtcaactcatatatgtgt
gtctgtctaccggggttcacaggtgtgcactgcgaggtagacatcgacgagtgtgagagc
gagccttgtcagaatggagggtcctgccacgacggctccaactcctacacctgtcactgt
gtggaggcggagccaggggaggagccgtggggcggccataactgtgacgtccgcctgatt
ggctgcagggaacacctgtgtgagaacggagccccctgtgtgcctatcctaagccaagag
gatggtaatgaggacagtgatggggatgaggatgaacaagagcatggccacacctgcctt
tgtcccccgggcttcactgggaagcactgcggcatccccaccaccttctccttcaacaca
gagggctatatcctcattcagctccctcctacagctaacaggagcagggcagaagtagaa
ccccatcaccaccacgtccagctgcgattcaggaccactctgcctgacatgcttctgttc
tacggaggggctgagcactactttgtgtccctggagatcgtggggagtctcctcaaggct
agagctggatcagggaaaaagctacaggccacctaccatctcccagtcaacgacggagac
tggcatgaggccaaagtgaccatggatgagaagctggtactgatggtcaaaggaccagtc
tgtgacaatgacgagggatgcacggtggagaacgaaggacacaaccaactggtcttcttc
caacatggatcattcccagaagtctatgtggggggagccccccagaagtatctggccaac
acagacagtaggaagggtttcattggctgcgtggaggatctacaagttgaccaccagcgt
gttctgccacaggatttctctcgagagcacgtccaagacatggagctgggctgcaacaag
actgactggtgtcatcctgacccctgccatcatcgtgggcagtgtattgacctgtggact
agcttcagttgtgagtgtcatcgaccctatcatggctccctgtgtgaagaagaacacccc
tcatggacattcagtaatgaagaaacagtgagctatgctgccttcaacatcaacacaact
gatggtgagaacttcaacatctccttcttcctccgctctctgaatcccagcggcttgcta
ctccagctgcggagagggaggagggcctacctcatcctgtacctgcgggagggaaccctg
gtcttcaacagcccccccaccactctgttctctaacaatatctacttcaccagcggacag
agggagctggttactataacaatacgccagggtcaggtagggttcaaccaggctggtaca
cagctctccctggggagggtgaggatggaacggggggatgtggtgtacatcgggggtctg
ccaccgggggagtccactgccccctggggaggtcacttcaaaggctgcctgcaggacatc
actctggaccacatgcagctgtatcccaaccacacaaaggaggagtgccacacctacgaa
gcgtaccagtgctacttaccaaacaaagctgagaatgtgttggatggctgtgtcagtgat
gaggcatgcaagactggcccctgtcagaatggaggaacgtgcatggtcacctggaatgac
tttgagtgcacctgtcacatgaacttctctggcaggcgatgtgatacacgcgtgtggtgt
gtcagtgacccctgtgccatgggcagccagtgtgtggatctagttgacggttatgagtgt
ctcactaatgccacctttgagagcaacgctctgcagttcactgctaacggctcgctagtc
gcctcggtgactagtgtctccgtggacatacgtacgcggaaggagaacggcgtgctactg
cgggccactaatggagcagaggtcttctgtctgggtctgctcaactcctccctactagtc
aaactactgagcggcaacagcctggagttgcaggcattcaccagtgacctgcccatctca
gatggggcctggcatcatctccacctggccatgacagaccccctgcagcctgtgtcccgc
tggcgcctcactgtggacgggcgcagggtgggcagcaccatgggcacagccgggaatctc
aacttcctcaacgacaccactgtgtggatggcagagaactacacaggctgtctgggggag
ttgagggtgggaggagtctacctacccctggtggacgaccaggatgccccccaggcagcc
cggtttatcaggcaggggggccagaagcccaagatggggtgtgttggtgccgatgtgtgc
cagtcccagccctgcctaaaccagggcttctgccaggacctctggaacctgttaaactgc
agctgtaccccaggctgggaaggacagttctgccagaggaacacagatgagtgtgcctca
ggcccctgtgcccatggcacctgcacagacctgctggcagactaccggtgtgagtgtcac
aaaggctgggggggcagagactgtgatgaggaggtggatgactgcctggaacacagctgt
ttgaacggaggctcctgtctggacggtacgggcaactaccactgcgtctgcctccctgga
tacagcggccgccgctgtcagcagagattccctccacagcagtgtgatgaggatacgcag
tgtgacaacggtggagtctgcatggatgggatctggggtgccaactgcacctgcaagcct
ggatacactggggactggtgtgaggcagagatagatgagtgtgagtccagttcctgtctc
aacggtgctacctgcctggaccgactcaacagcttccagtgtatgtgtttgccgggcttc
agcggcacacagtgtgaaagcaatagacaggagcagagggagcgtgtgccctggctagtg
gtggccatccctctggccagcctgtgtgtgctgttggctgtggtggccctggtcttcatg
gtgctgaccgcccgcaagaagcgccagtcagagggcacctatagtcccagtgcccaggag
gtggcaggggcacggctggagatgggcagcgtgctcaaagtaccccctgaggagaggctc
atatga
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