Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139410807
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Entry
139410807 CDS
T10872
Name
(RefSeq) sarcoplasmic/endoplasmic reticulum calcium ATPase 2-like isoform X1
KO
K05853
P-type Ca2+ transporter type 2A [EC:
7.2.2.10
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04020
Calcium signaling pathway
ocla04148
Efferocytosis
ocla04260
Cardiac muscle contraction
ocla04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
139410807
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
139410807
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
139410807
04261 Adrenergic signaling in cardiomyocytes
139410807
Enzymes [BR:
ocla01000
]
7. Translocases
7.2 Catalysing the translocation of inorganic cations
7.2.2 Linked to the hydrolysis of a nucleoside triphosphate
7.2.2.10 P-type Ca2+ transporter
139410807
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Gene cluster
GFIT
Motif
Pfam:
Cation_ATPase
Cation_ATPase_C
E1-E2_ATPase
Cation_ATPase_N
Hydrolase
Hydrolase_3
HAD
Motif
Other DBs
NCBI-GeneID:
139410807
NCBI-ProteinID:
XP_071012437
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Position
6:23086511..23115414
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AA seq
1042 aa
AA seq
DB search
MDNAHTKSVEEVYSDFSVNESTGLGLDQVKRQKEKWGSNELPAEEGKSLWELVVEQFEDL
LVRILLLAACISFVLALFEDGEETITAFVEPFVILLILIANAIVGVWQERNAEDAIEALK
EYEPEMGKVYRQDRKTVQRIKAKEIVPGDIVEVAVGDKVPADIRLTSIKSTTLRVDQSIL
TGESVSVIKHTDPVPDPRAVNQDKKNMLFSGTNISSGKAIGVVVATGVNTEIGKIRDEMA
ATEQEKTPLQQKLDEFGEQLSKVISLICIAVWMINIGHFNDPVHGGSWIRGAVYYFKIAV
ALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQ
MSVCRMFIIDQADGNSCSLNEFTITGSTYAPEGEVYQDGRLVKSSAYDGLVEIATICALC
NDSSLDFNEAKGVYEKVGEATETALTCLVEKMNAFDTDVKGLTKIDRANACNSVIMQLMK
KEFTLEFSRDRKSMSVYCTPNKARSSLGKMFVKGAPEGVIDRCTHVRVGTCKVAMTPGIK
ERIMSTIRGYGTGRDTLRCLALATRDTPPRKEDMVLVDCARFVDYESELTFVGCVGMLDP
PRTEVAASIKLCRLAGIRVIMITGDNKGTAVAICRRIGILGEEDDVDKMAFTGREFDDLS
LQAQRDAVINARCFARVEPSHKSKIVEFLQAMDEITAMTGDGVNDAPALKKAEIGIAMGS
GTAVAKSASEMVLADDNFSSIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALG
FPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMNKPPRSAKEPLISGWLFFRYLAIGC
YVGAATVGAATWWFVAAEDGPMISLYQLSHFLQCSPDNPDFSDLECHVFESPYPMTMALS
VLVTIEMCNALNSLSENQSLLRMPPWENIWLLGAICLSMSLHFLILYVEPLPVIFQITPL
DLTQWLVVLKISLPVILLDELLKFVARNYLEPGNQPESKSASKGWSLSACTEGISWPFVG
ITLPLVLWLYSIDTNVSALFWS
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atggataacgctcacacaaagagtgttgaagaagtttatagcgatttttctgtcaacgaa
agcacaggacttggtttggaccaggtgaaacgtcagaaggagaaatggggctcgaacgag
ctacctgctgaagaagggaagtctctatgggagcttgttgttgaacagtttgaagattta
cttgtaagaattcttctgctggcagcttgcatatcttttgtcttggccttattcgaggat
ggagaagaaacaatcacagcctttgtggagccttttgtaatcttactcattcttatagcc
aatgccatagtgggtgtttggcaggaacgcaacgctgaggatgccattgaagcccttaaa
gagtatgagcctgagatgggcaaggtctaccgccaggacaggaagaccgttcagaggatc
aaggccaaagaaatcgtgcctggagacatcgtggaggttgctgttggagacaaggttcct
gcagacatccgtcttacatccatcaaatctacaaccctgagagtagaccagtccatcctg
accggtgagtcggtctctgtcatcaagcacacggacccagtgcctgaccctcgagctgtc
aaccaggacaagaagaacatgctcttctccggcaccaacatctcgtctggcaaggctatt
ggtgtggtggtggccacgggcgtgaacactgagattggtaagatccgtgatgagatggca
gccactgagcaggagaagacccccctgcagcagaaactggatgagttcggggagcagctg
tccaaggtcatctccctgatctgcatcgctgtgtggatgatcaacatcggccacttcaac
gaccccgtccacggaggatcctggatccgcggcgccgtctactacttcaagatcgctgtg
gccctggccgtggccgccatccccgagggtctgcctgctgtcatcaccacctgcctggcc
ttgggcacccgccgcatggccaagaagaacgccatcgtccgcagcctgccctctgtggag
accctgggctgcacctctgtcatctgctccgacaagaccggcaccctcaccaccaaccag
atgtctgtctgtaggatgttcatcattgaccaggccgacgggaacagttgctctctgaat
gagttcaccatcactggctctacttacgcccctgaaggagaagtgtaccaggatggcaga
ctagtgaagtcctctgcgtatgatggtctagtggagattgccaccatctgtgccctgtgc
aatgactcctctctggacttcaatgaggccaaaggtgtgtatgagaaggttggcgaggct
acagagacggctctcacctgcctggtggagaagatgaatgcgtttgacaccgatgtcaaa
ggcctgaccaagatcgacagggccaacgcctgcaactctgtgatcatgcaactgatgaag
aaggaattcaccctggagttctccagagacaggaagtccatgtctgtgtactgcaccccc
aacaaggcccgctcctcacttggaaagatgtttgtcaagggtgcccccgagggagttatt
gacagatgtactcatgtcagagtgggcacctgcaaggttgccatgaccccgggaatcaaa
gagaggatcatgtctacgatccgtgggtacgggactgggcgtgacaccctgcgctgcctg
gctctggccacccgggacaccccacccaggaaggaggacatggtgctggttgattgtgcc
cgctttgttgattatgagtctgaactgaccttcgtgggctgcgttggcatgctggaccct
cccaggaccgaggtggctgcctccatcaagctgtgccgcctagccggcatccgcgtcatc
atgatcactggcgacaacaagggcactgccgtggccatctgccgccgtatcggcatcctg
ggtgaggaagacgacgtggacaaaatggcgttcactggccgcgagtttgacgacctgtcc
cttcaggcccaacgtgatgctgttatcaacgcccgctgcttcgcccgtgtcgagccctcc
cacaagtccaagatcgttgagttcctgcaggccatggacgagatcacagccatgactggt
gatggagtgaatgatgctcctgccttgaagaaggcagagattggcatcgccatgggctct
ggcactgccgtggccaagtcagcctctgagatggtcctggccgatgacaacttttcttcc
atcgtggcggctgtggaggagggcagggccatctacaacaacatgaagcagttcatccgc
tacctcatctcctccaacgtgggagaggtcgtctgtatcttcctgacggctgctctgggc
ttccctgaggctctgatccccgttcagctgctgtgggtcaacctggtgacagatggtctc
cctgccaccgcactgggcttcaaccccccagacctggacatcatgaacaagcccccccgc
agtgccaaggagcccctcatctccggatggctcttcttcagatacctggccatcggctgc
tatgtgggagctgccacagtgggagccgctacctggtggttcgtggctgctgaggatggc
cctatgatctctctgtaccagctgagccacttcctgcagtgttcccctgacaaccctgac
ttctcagacctagagtgtcatgtgtttgagtccccctaccccatgaccatggccctgtct
gtgcttgtcaccattgagatgtgcaatgcccttaacagcctgtcagagaaccagtccctg
ctgcgtatgcctccctgggagaacatctggctgctgggggccatctgcctctccatgtcc
ctccacttcctcatcctctatgtggagccactgcccgtcatcttccagatcacccctctg
gacctgacccagtggctggtggtgctgaagatctccctgcccgtcatcctgctggatgag
ctgctaaagttcgtggccaggaactacctggaacccggtaaccagccagagtctaagtca
gccagcaaaggctggtccctctctgcatgcacagagggcatctcctggccctttgtgggc
atcaccctccccctggtgctgtggctctacagcatcgacactaacgtgtctgccctgttc
tggtcctga
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