Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139410886
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Entry
139410886 CDS
T10872
Name
(RefSeq) charged multivesicular body protein 7-like
KO
K15053
charged multivesicular body protein 7
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03272
Virion - Hepatitis viruses
ocla04144
Endocytosis
ocla04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
139410886
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
139410886
09143 Cell growth and death
04217 Necroptosis
139410886
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139410886
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ocla04147
]
139410886
Membrane trafficking [BR:
ocla04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-III complex
139410886
Exosome [BR:
ocla04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
139410886
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Snf7
YqgQ-like
PspA_IM30
Motif
Other DBs
NCBI-GeneID:
139410886
NCBI-ProteinID:
XP_071012620
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Position
6:27296815..27302742
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AA seq
464 aa
AA seq
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MVPSNLGEEMSTKVTLPPEWEDDERMNFLFSDFKENRDVNTKDWDSKIDFWTSLILKICR
SRGTVCFNLQELNKIFQRKGFVPLGLGTVIRCMARCGKIQRESEFAANVDCGWVSWGFGL
LLVKPLKWTFSTLLGSSGVTLEESFVVIELVKEKAAELLGVYWSSPVANCSLLSFQELQT
LSSHVCIDESTLCMALLQLQREKQVTVSLHEGEKIVKFSQPGQDRVSSVSDVDLGIYQLQ
RSERLLEVRVEALGLEAEKCKEEARVLLREGKKSQALRYLRSRKRVERKADGLNAQLENV
KGILDRIANSETDKLVIQAYQAGVSALRLSLKDGTVEGAESLVDQIQELCDTQDEMNQTL
AGGALNSTDADTDELEDELRSLLENSTLDRPSTLPEVPSHPLSPVRESGSLCDDLLCALP
LVPQSLFNITDEELDKELSRLTLADTCLQEKDCTAPVKRAESAQ
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atggttccatcaaatcttggggaagaaatgtctactaaagtaacgttgccacctgagtgg
gaggacgatgaacggatgaatttcctattctctgacttcaaagaaaaccgagatgtcaac
acaaaagattgggacagtaaaattgatttctggacatcactcattcttaaaatctgccga
agtcgcggaaccgtctgttttaatttgcaagagttgaacaagatttttcagagaaaagga
tttgtacctttgggtttgggtactgtcattcggtgcatggctaggtgcggcaagatacaa
agagagtcagagtttgcagcaaatgtggactgtgggtgggtgtcttggggttttggcctg
ttgctggtgaagcctttaaaatggacattttcaactcttctgggtagcagtggggttact
ttggaggagtcgtttgttgtcattgaactggtaaaggaaaaggcagcagaattgcttggt
gtctactggagttccccagtggccaactgctctctcctgtccttccaggagctccagaca
ctgtcgtcccatgtgtgtattgatgagagtaccctgtgtatggctctgctacagctgcag
agggagaagcaggtcacagtatcactgcatgaaggcgagaagattgttaagttttctcag
ccaggacaggaccgtgtgtcttcagtcagtgatgtggacctaggcatctatcagctacag
cgcagtgagagactgcttgaagtgcgggtggaggcattgggtctagaggcagagaagtgt
aaagaagaagctagggtgttgctacgcgaagggaagaaatctcaggccctgaggtatttg
agaagccgaaagagagttgagaggaaagcagacggcttaaatgcccagctggagaatgtg
aagggaatcttggacaggatagcaaactcagagacagacaaactggtgatacaggcatat
caggctggagtgtcagccctgcgactctctctgaaggatgggactgtagagggagctgag
agccttgtggatcaaatccaagagttgtgtgacactcaggatgaaatgaaccaaactctg
gctggtggagcgctcaactcaacggatgccgacacagacgagctggaggatgagctgaga
tctttattggagaactctactctggataggccttccacacttcctgaagtaccgtcacac
cctctttcacctgtcagggaatctggttccctttgtgatgatctgctgtgtgctttgccc
ttagtccctcaaagcctcttcaatatcacagatgaggaactggacaaagagctgagccgt
ctaacacttgcagatacatgtcttcaagaaaaagattgtaccgcgccagtgaagagggct
gagtctgcacagtga
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