Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139410935
Help
Entry
139410935 CDS
T10872
Name
(RefSeq) zinc finger CCHC domain-containing protein 8-like isoform X1
KO
K13128
zinc finger CCHC domain-containing protein 8
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ocla03041
]
139410935
Spliceosome [BR:
ocla03041
]
Complex C
Other components
Complex C specific factors
139410935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PSP
zf-CCHC
Knl1_RWD_C
KASH_CCD
zf-CCHC_4
Motif
Other DBs
NCBI-GeneID:
139410935
NCBI-ProteinID:
XP_071012717
LinkDB
All DBs
Position
6:complement(29941530..29946983)
Genome browser
AA seq
724 aa
AA seq
DB search
MAEFDFGDCELFEQLEESMPVATHIRFTEEGGEEGSELSERLEECEETIRSLIEENQELK
RKLKVLTRPSGINVENIKIDGPLLQILFANNSISKQCRQEIEDSICSIVQKHQLHGEVEK
GNPSSNVNPQSSSFIMEEDQKTKTCGIKKIKEAFSMVGSVLYFTSFCVDKLGQPLLNDNP
QQTEGWEVPKYQQVFSQVIALDGQEVQMKEKRPKPCCFNCGLDGHQLRDCPQPKDMARIN
EKRKEFSQGNQGNLSNQRYHAEELEERFARYKPGIMSEELMSALGVEMNTLPPHIYRMRR
LGYPPGWLKEAEMENSGLTLYDGKVSKDGELTEVDHGQSISYDVSKLVDFPGFNISAPPS
VKDDYRLYGSIPIQHNHMKQNFADYLSNNFPMPGANCNKRLHESESTPQQAKKRRSDARS
SDMDVDSDQDTTPRRHRSSDSFQFQPPLPPDSPSFGSPPPLPHGTPPATPTPPPLPKGTP
PPTPTNGSPALRGRTVGVGEESVGGEEEELTLEELEEQQRLIWAALENADTTTNSDSETP
AVGTPLPSSPSVSTPAQVDTETEMEEGDAEDEEKEGSVEVSSHNSDEQISVDPSSSKCQD
DVEDKGKVVEDESSLLKTPVQEESPMSPEAAADRGNMLAQRPSLLQTPVQESRQPDPSDQ
DAVEGDLSDSVGKVTAVPHRSRFAHGIIPFEDTPEFTEVAEATGTYLRIRDLLKGSPRNM
AKKK
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atggcggagtttgattttggtgactgtgagctctttgaacaattggaagagagtatgcct
gttgctactcacattcggttcactgaggagggtggagaggaaggctctgagctcagtgaa
agattggaggagtgtgaggagacaatccggagtctaatagaagagaatcaagagttgaag
agaaaattgaaagttttgacaaggccaagtggcattaatgttgaaaacatcaagattgat
gggcctcttctacagatccttttcgcaaataatagcatctcaaagcaatgccgtcaagaa
attgaagactccatctgtagtattgttcagaaacatcagctgcatggagaagttgaaaaa
ggaaatccctccagcaatgtcaaccctcagtcttcaagtttcattatggaagaagatcag
aagaccaagacctgtggcatcaaaaagattaaggaggccttcagtatggtgggaagtgtc
ctgtatttcaccagtttctgtgtggacaaacttgggcagcccctgcttaatgataacccc
cagcagacagaaggatgggaggttccaaaatatcagcaggtcttcagccaggtcatcgcc
ttagatggacaggaagtacagatgaaagagaaaagacctaagccttgttgtttcaactgt
gggttggatggtcatcaactgcgagactgtcctcagccaaaggacatggccagaatcaat
gagaagcggaaggagttttctcagggtaaccagggcaacttgagcaatcagcgttaccat
gctgaggaactggaggagcgatttgccagatacaaacctggaatcatgagtgaggagctg
atgtctgcactgggagttgaaatgaacactctaccccctcacatctaccgcatgaggcgg
ttaggctacccacctggctggcttaaagaggcagagatggagaactcgggtctcacgcta
tatgatgggaaggtgtcaaaagatggagaactaacagaggtcgaccatggacaaagtatt
tcctatgatgtttccaagctagtagatttcccaggcttcaatatatctgcaccacctagt
gtgaaggatgactacaggctatatggctctattccaatacagcataaccatatgaagcag
aattttgctgactatctgtccaacaattttccaatgcctggtgccaactgcaataagaga
ctgcatgaatccgaatcaactccccagcaggcgaaaaaaaggagatctgatgccaggagt
tcagatatggatgttgattcagaccaggatactacaccccgccgccaccggagctcagac
agcttccagttccagcccccgctgccccctgactcgccatcctttggttcaccacctccc
ttacctcatggtacaccaccagccactcccactccaccccctcttcctaagggaacacct
ccccccacacccactaatggttcaccggctctacggggacgcactgtgggagtgggtgag
gagtctgtaggtggggaggaggaagagctgacactggaggagctggaggagcagcagagg
ctgatctgggctgcattggaaaatgctgataccaccaccaacagtgactctgagacacca
gctgttggaacacccctccccagctcgcccagcgtctccacacctgcccaagtcgacact
gaaactgaaatggaggaaggtgatgctgaagatgaagaaaaggagggatctgtggaggtt
tccagccacaacagtgatgagcagatcagtgttgatccatcttctagcaaatgtcaggat
gatgttgaagataaaggcaaggtggttgaagatgagagcagcttgctgaaaacaccagtc
caagaggagagccctatgagtcctgaagctgctgcagatagaggcaatatgcttgcacag
aggcccagcttgctgcaaacaccagtccaagagagccgtcagccagacccctcagatcag
gatgctgtcgagggagatctgtctgactctgtggggaaggtaacagccgtgcctcaccgg
agtaggttcgcacatggcattattccctttgaggacacgccagaattcacagaggttgct
gaggccaccgggacataccttcgaatccgagacttgctgaaaggttcccctcgaaatatg
gcgaaaaaaaagtga
DBGET
integrated database retrieval system
