Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139410944
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Entry
139410944 CDS
T10872
Name
(RefSeq) transcription factor COE2 isoform X1
KO
K09103
early B-cell factor
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139410944
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
139410944
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GFIT
Motif
Pfam:
COE1_DBD
COE1_HLH
TIG
Motif
Other DBs
NCBI-GeneID:
139410944
NCBI-ProteinID:
XP_071012730
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Position
6:30446162..30482335
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AA seq
583 aa
AA seq
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MYGIQEHLIRDVSGLKERTLGEEMDPVRSWVRNVGVVDANVAAQSGVALSRAHFEKQPPS
NLRKSNFFHFVLALYDRHGQPVEVERTSFVDFVEQDKEQTGEKTNNGTHYKIQLLYSNGV
RTEQDLYARLIDSVTKQPIAYEGQNKNPEMCRVLLTHEVMCSRCCEKKSCGNRNETPSDP
VIIDRFFLKFFLKCNQNCLKTAGNPRDMRRFQVVLSSTVSVDGHVLAVSDNMFVHNNSKH
GRRARRLEPGESVENGMEYATPCIKAISPSEGWTTGGAMVIVIGENFFDGLQVVFGSMLV
WSELITPHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGTPGRFIYTALNEPTIDYGFQRLQ
KVIPRHPGDPDKLAKEMLLKRAADLVEALYGNPHSNQDMLLKRAADIAEALYSVPRPHNQ
LQALPSSPAHGSVMGLGSYPSQLGVSIGEPGQTSQGYIRNSSSLSPRGYPSASIPQQSGY
GGGGGMSGGYGAVPMTSLGVPGSPGFSSASPTGSPYGIMPSSPTIPGSSSSSSLLPFSSF
PSSAKQKSAFAPVLRPQGSSSPACPTSGGNSFRAMTGLVVPPM
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgtacgggatccaggagcatctgataagagacgtcagcggattaaaagaaagaactcta
ggagaggagatggatccagtccggtcctgggtgcgtaatgtcggtgttgtggatgctaac
gtagcagcgcagagtggtgtagctctctccagggcccactttgagaagcagcccccctct
aacctgcgcaagtccaacttcttccacttcgtcctggcactctatgacagacacggacag
cctgtagaggtggagaggacttccttcgtggactttgtggaacaggacaaggagcagacg
ggagaaaagaccaacaacggcacgcactacaagatacagctcctctacagcaatggggtt
cgtacggaacaggatctttatgcacgacttattgactcagtcactaaacagcccatagca
tatgagggacagaacaagaatcctgaaatgtgtcgtgttctgctcactcacgaggttatg
tgcagtcgctgttgtgagaagaaaagctgtggaaaccgcaacgagacgccctctgaccca
gtcatcattgacagattcttcttgaagtttttcctgaagtgtaaccaaaattgcctgaag
acagcagggaacccaagggacatgaggagatttcaggtggtcctgtccagcactgttagt
gtagacggacatgtcttagctgtgtctgacaacatgtttgtccacaacaactccaaacac
ggccggagagcccgcaggctggagccgggagagtcagtggagaacggcatggaatacgcc
accccctgtatcaaagccatcagccccagtgagggctggaccacgggcggggccatggtc
attgtgatcggggagaacttctttgacgggctgcaggtggtgttcggcagcatgctggtg
tggagcgagttgatcacgccccacgccatccgtgtccagacgccccctcgccacatccca
ggggtcgtggaggtcacgctgtcctacaaatccaaacagttctgcaaggggacacctggg
cgcttcatctacacagcgctgaatgagcccaccatagactacggtttccagagacttcag
aaggtcatccccagacaccctggtgaccctgacaaactggccaaggagatgctactgaag
agagcagctgatctggtagaggccttgtatggaaacccacacagtaatcaggacatgttg
ctgaagcgtgcagcggacattgctgaggccctgtacagtgttccccgtccccacaaccag
ctgcaggctctgcctagttccccagcccacggcagtgtcatgggcctaggctcatacccc
tcccagctgggggtcagcatcggagagccaggacaaaccagccagggttatattcgtaac
tccagcagtttgtccccacggggatacccttctgcctccatccctcagcagtcgggctat
gggggaggtggaggcatgagtggcgggtatggggcagtgcccatgactagtctgggggtg
ccaggatcccctggtttcagcagtgcctcccccactggttctccctatggcataatgcca
tctagtcccaccatcccgggttccagctcctcctcctccctcctgccgttctcctccttc
ccgtcctcagccaaacagaagagtgcctttgctcccgttctccggccccagggatcctcc
tctcctgcctgccccacctcaggaggcaacagcttcagagcgatgaccggcctggtagtt
cccccgatgtag
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