Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139410967
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Entry
139410967 CDS
T10872
Name
(RefSeq) tRNA (32-2'-O)-methyltransferase regulator THADA
KO
K24169
thyroid adenoma-associated protein
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ocla04990
]
139410967
Domain-containing proteins not elsewhere classified [BR:
ocla04990
]
Other domain-containing proteins
Armadillo repeat domain-containing proteins
139410967
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF2428
TPR_Trm732_C
TPR_Trm732
Motif
Other DBs
NCBI-GeneID:
139410967
NCBI-ProteinID:
XP_071012809
LinkDB
All DBs
Position
6:31212630..31229228
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AA seq
1874 aa
AA seq
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MVPVQSVEDQMKAVLDCVVTEDKIPTDVSTTLKLFMNKLDECSRSNIKRCKERSLEEAGQ
LLRKIPVKQLQCLEERLLLPLIRLLVAMQMQMFNIASRKLDQMLQHLAEVNRLLVFREIQ
HCLCTIVGKDQALSIGDLQIACMFLEDSSIGRELWREACPSLIDKVAELFPVILEQEGLR
NGPLCYQAVKVCLQVFQLLPGEVAPLVWEKEQGSLAVQSILQSLMDIILGQCSNRDTRLL
AGTTVAMLINTVLEGGEGGAAAWSLLQVTHSEPWQLCVGGLQVQCIPRSQDGVDRLAVSR
GLLTCCRRGILVSQVDTTGTCLLLGGLFPLVSALCEEKLDCHYYVFEVLTLWLKSVKECL
AEIWEVTSAPLLPDDSSLRQQLIQVIWDNAESPVEGVSEVVRSAFCLLLEIYEMDCQRFG
DTQKNLHISLLHRITKLPWEAKAKYFPLCSLLPYVGTDMVLEQYSELPNHLLKCMSTNHL
SPCASELYKCLIQKQRCELCEELAQDAPPLELDLANQWARRWRTTLLEALTSDVTLLQNN
SSSHLLPWTLRVFPAAVEPLLAPLDPASPGHLHAWACVMSARRATYGGSPWALESGYALE
TLSLALGCVDDRVRLAALNLLCCSPKTKEAPTPEELSTMMTFIPQNLNSESSPFRQHLQA
GVKRFLVRIRDSCLAHLRGQKGKRDGGVSLTKETEMALDQGVGFVDWLSQLTLSYLAPGH
SYQRKKTVLLLLSAVLETCTDTWSPDKKKGQPPVNMASLINWARLRGWWDFFSRSKQLVL
IGCLEDSTNEIRELSAGLLVRFFPPSFLEDITPVLFGRAELLLCSPRVPEAQMGALIIKV
LLQKSGGQSHVPWLDSRINYVSSGDSKASTLVRYLLKELEQHYLIAKDDMMLAARTKPIH
GILTALERCILEVPNTLCDVVDHRMTIEILVLLERITLLLLGVLYGDQDACGDEKDIPPS
FCDMGNAITSLVGQVAGEDQGEGDECVLLSEEHSLVLTCCWVSLKEIGIFLGSLVERILA
QAKQTEPFLTLEDLKRASKVFKNILLKCRHWGAVEGCCVGFTRFCACLLSSSDPELRDIP
AHMLKQGLEVLQSRCTSVTRRAAGLPMLILCVVSAEEASKARPLLAHSIHTLLDTARSPL
PQDWDQTLDLPQVCAVHTLQALVRGSGLGVAVLQFAPAVAILSLTLLSSPCWAMRNAALQ
LYSSLCSRLLGQRSGGEEGSTQHGMSPPAFFTHYPALQPFLLGELRGAAEDLQGPSGEAR
LRLHPSLYPVLTLLAKLQRGVQDQTGTLSDFLIPLLQLAASPVYSVRVMTSKALVAMTPP
CQYVSTLLRLTGELPEPQDPSCHNRLHGQLLQIRAILDRGLCTQRPPPDALCDVVDRVES
RLWLVTGAQHCPLVRGAYLGVAGLLRGFCSQGFLCQMRDVLLSELHSPHQRLQVGSASFH
QNAIHFLCAEPRWACQVWGSFSTESSDLRLSLVSWAAERRRWSGTSMQQVLQTALQANLK
EALLDQSVEYSRTYLTTLIAVMTPGADHTLSQKPSPSPPLEGPVLLECVELLLGALEGHR
GGPEFLSQALCAASLLLSQSLQTSLFPRWCSLLEVHRVPEAPEALRRSCAGALCLAGAPL
LSMALRDHTPLPVFSTRLINTGLYLLQDESQQVRIKAAGFASTLCQARRGGGERSMYLMQ
VNQALPFLLELLLEECWDSPGALEVLLCHMPQSDLSSVLREARDTGCASLYEQDEANVFA
EPSVMSACLLPYLLQLAEKYPASSVVGERLGVWARENVTDLLENLRVCKDLQPGDTLDPA
WLTLLMDSSFHGTLCGLWARAAFLLRLLEMSDDLRPLCDPESLRKNIQEVHCVLRQNGVQ
MPAAFTAALTGDLP
NT seq
5625 nt
NT seq
+upstream
nt +downstream
nt
atggtgcctgttcaatcggtcgaagatcagatgaaagctgtactagactgtgtggtcact
gaggataaaatacccacagatgtcagcactacgttaaagcttttcatgaacaaacttgat
gagtgctcaaggagcaacataaagcgatgcaaagagcgtagtctggaggaggcaggccag
ctgctgaggaagatcccagtgaagcagcttcagtgtttagaggagaggctcctcttgcca
ctcatcaggctactcgtcgccatgcagatgcagatgtttaacatcgccagtcgcaaatta
gaccagatgttacaacatctggcagaagtcaatcgtttgttggtttttcgagaaatccag
cactgtttgtgcactattgtgggaaaggatcaggcattatccattggggacctccagata
gcttgcatgttcctggaggacagctctattggtcgtgagctgtggcgagaggcctgccct
tccttgatagataaagtggctgagttattccctgtaatactggagcaggagggtttgaga
aatggaccactgtgttaccaagctgtcaaggtgtgtttgcaggtttttcagctgttgcca
ggtgaggtggcccctctggtgtgggagaaggaacaggggagtttggcagtgcagagcatc
ctacagtctctaatggacatcatcctgggacagtgctccaacagggacacccgtctcctg
gctggcaccacagtggccatgctgattaacaccgtactcgagggaggggagggaggagca
gctgcctggagtctgctacaagtcactcactcagagccctggcagctgtgtgtgggtggt
ctccaggtgcagtgcatcccccgctcgcaggatggagtggacagactggctgtgagcagg
ggtctgctgacctgctgtagaaggggcatcctagtcagtcaggtggacaccacagggact
tgtctactcctgggtggtttgtttcctttggtctctgctttgtgtgaggagaagcttgac
tgtcactactatgtctttgaagtgttaacactgtggctgaagagtgttaaggagtgtcta
gctgagatctgggaggtgaccagcgctcccctgctgcccgatgactctagcctgagacaa
caactcatccaggtcatctgggacaatgctgagagtccagtcgagggtgtgtcagaggtt
gtgcgcagtgcgttctgcctgctgcttgagatctatgagatggactgccagcgttttgga
gacacacagaagaacctgcacatttccttactccaccgcataaccaaactgccctgggag
gccaaagccaaatacttccccctctgttcactgctcccttatgttggcactgacatggtg
ctggagcagtactccgagcttcccaaccatctcctgaagtgcatgtccaccaatcatctg
tccccatgtgcctcagagctttacaagtgtctgatccagaagcagcggtgcgagctgtgt
gaggaactggcccaggatgctcctcccttggagctggatctggccaatcagtgggccagg
cgttggcggaccactctgctggaggccttgacctctgatgtgacccttcttcagaacaac
agctccagccacttgctgccctggactctgcgtgtcttccccgctgctgtggagcccctg
cttgcccctctagaccctgcctctccagggcacctccatgcctgggcctgtgtgatgagt
gcccgccgagccacttatggaggctccccctgggccctggagagtggctatgccctggag
actctcagtcttgccctaggatgtgtggacgatcgagtccgcctggccgccctcaacctg
ctatgctgcagcccaaagaccaaagaggccccgacgccggaagagctgtctaccatgatg
accttcatcccccagaacctcaacagtgagtcgtcaccgttccgccagcaccttcaggcg
ggggtgaaaaggtttctggtccggatccgagacagctgcctggcccacctcagaggacag
aagggaaaaagggacggtggtgtcagcctcacaaaggagacagagatggcactggatcag
ggagtagggtttgtggactggctgtcccagctgacgttgtcctatctggcaccaggacac
agctaccagaggaagaagactgtcctgctgctgctgtctgctgtactagagacctgcaca
gacacctggagcccagacaagaagaagggccaacccccagttaacatggcctctttgatc
aactgggcaaggctgagaggatggtgggatttcttctctcgatcaaaacagctggtcctt
attggctgtttagaggattccaccaatgagattcgggagctctctgcagggttactggtg
agatttttcccacctagttttctggaggacattactcctgtgctgttcggccgagcagaa
ctgctcctctgcagtccccgtgtgccagaggctcagatgggagctctgatcatcaaggtc
ctcctccagaagtctggaggtcagtctcatgtgccctggctggacagccgtatcaactac
gtcagttctggggactcgaaggcctctactctggtcaggtatctactcaaggaactcgag
cagcattacctgattgctaaggatgatatgatgcttgctgcaaggaccaaacccatacac
ggtattttgactgccctagagaggtgtatactagaggtccctaacaccctgtgtgatgtg
gtcgatcacagaatgaccatagagatcctggttctcctggagaggatcactctgctccta
ctgggtgtgctgtatggagaccaggatgcctgcggtgatgagaaagatatacccccatct
ttctgtgacatggggaatgccatcacctctctggtaggccaggtggcaggagaggaccag
ggggagggggatgagtgtgtgctgctgtctgaggaacacagtctggtcctcacctgctgc
tgggtctccctcaaggaaataggaatctttctaggttctctggtggagagaatccttgct
caggccaaacagacagaaccctttctaactttagaagacctgaagagggcctctaaagtg
ttcaagaacattcttctcaaatgccgccactggggggcagtagagggctgctgtgtgggc
tttaccaggttctgtgcctgtctcctgagcagcagtgacccagagctcagggatatccca
gcacacatgctgaagcagggcctagaggtgctgcagtctcgctgtacgtcagtgacccgg
cgggcggcagggcttcccatgctcatcctgtgtgtggtgtcagcagaggaggccagtaag
gcccggcccctcctggcccacagcatacacaccctgctggacacagccaggtcccctctg
ccccaggactgggaccagacactggacctgccacaggtgtgtgcggtccacaccctgcag
gccctggtacgaggctctgggctgggggtggctgtgctgcagtttgccccggctgtggcc
atcctgtccctgaccctcctcagttccccctgctgggccatgaggaatgctgcactgcag
ctctacagctctctgtgctcaaggttgctgggtcagcgctctggaggtgaggagggctcc
acccagcatggcatgtctccccccgccttcttcacccactaccctgccctgcagcccttc
ctcctgggggagttgaggggggcggcagaggacttgcagggtccctctggggaggcccgg
ctccgcctgcacccctccctctaccctgtcctcaccctcctggccaaactccagcgaggg
gtccaagaccaaactggcactctgtcagacttcctgattcccctgctccagctggctgcc
agtcccgtctacagtgtgagggtcatgacctccaaagcattggtcgccatgacgcccccc
tgccaatacgtgagcacccttctccggttgacaggagagctgccggagccccaggacccc
agctgtcacaatcgtctgcatggacagctactgcagatcagagccatcctggacaggggt
ctatgcacacaacgtcctcccccagatgcactgtgtgatgtggtggaccgtgtagagtcc
agactgtggttggtgacaggggctcagcactgtcccctggtgcgtggggcctacctgggt
gtggcaggcctgctgagggggttctgctctcaggggttcctctgccagatgagggatgtg
ctcctgtcagagctccactcaccacaccaaaggctccaggttgggtccgcctccttccat
cagaacgctatccacttcctctgtgcagagccccggtgggcttgccaggtgtgggggagt
ttctccacagagagctctgacctgaggctgtcattggtcagttgggcggctgaaaggcgg
cgatggagtgggaccagcatgcaacaggtgctgcagacggcactgcaggccaacctgaag
gaggcgctgttggatcagagtgtggagtacagcaggacatatctgacaactctaattgcc
gtgatgactcctggggctgaccatactctgtcccagaagccttccccttctccccccctg
gagggtccagtcctgctggagtgtgtggagctgctgctgggggccctggagggccacaga
ggggggccagagtttctatcccaggccctgtgtgctgccagcctgctgctctcccaaagt
cttcagacatctctgttccctcggtggtgcagtctgttggaggtccaccgggtgccagag
gcccctgaggctctcaggagatcctgtgccggggccctgtgtctggctggggccccctta
ctgagcatggccctgagggaccacactcctctccctgtcttcagcaccaggttgatcaac
acagggctttacctgctgcaggatgagagccagcaggtgaggataaaagcggcaggtttt
gcctccacactctgccaagccaggagaggaggaggggagaggagcatgtacctgatgcag
gtcaaccaggctctgcccttcctgttggagctgctgctggaggaatgctgggatagtcct
ggtgccctggaggtgttgctgtgtcacatgccccagtctgacctgagctcagtcctgagg
gaggccagggacacggggtgtgccagtctctatgagcaggatgaggccaacgtatttgca
gaaccgtctgtgatgtcagcatgtctgcttccatacctgcttcagcttgctgaaaagtac
ccagcatcctcagtggtgggagaacgcctgggtgtatgggccagggagaatgttacagac
ctgctggagaacctccgggtctgtaaagacctccagccaggtgacaccctggacccggcc
tggttgacccttctcatggattctagtttccatggcaccctgtgtggtctgtgggccagg
gcagcattcctcctgcggctgctagaaatgtctgatgacctccggcccctctgtgatccc
gagagtttacgtaagaacatccaggaagttcactgtgtgctccgccagaacggtgtccag
atgcccgctgcctttactgcagctctgactggagacctgccttga
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