Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139410975
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Entry
139410975 CDS
T10872
Name
(RefSeq) squamous cell carcinoma antigen recognized by T-cells 3-like isoform X1
KO
K22611
squamous cell carcinoma antigen recognized by T-cells 3
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
Spliceosome [BR:
ocla03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
139410975
Chromosome and associated proteins [BR:
ocla03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
139410975
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Ortholog
Paralog
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GFIT
Other DBs
NCBI-GeneID:
139410975
NCBI-ProteinID:
XP_071012815
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Position
6:complement(31725938..31742793)
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AA seq
958 aa
AA seq
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MAATGDADETQLQEMEEEAVMENEMDSDEEEDLGIENSDDEIDNSSEDEKENEAEIQRLE
EQLSINAFDYNCHVDLIKLLRQEGELPRLRKARQKMSELFPLTEEIWLDWLKDEIHLTEE
EPNREKVYELFETAMKDYICPEIWLEYAQYSIGGMGLPGGMEKVRSIFERALTAVGLHMT
KGATVWEAYREFENAILATVQPPPGSVPTREQQELLNAQLERIHTLFRRQLSIPLMDMDG
TYAEYEEWSDQGVSDTVSQKYKGALQEMEKSKPYEETLMIAEPPKLAEYQTYIDYEQKEG
DPARIQIIFERALSENCLVPDMWAKYTKYLDRQLKIKDLVLSSHDRAVRNCPWTMGLWKN
YLLALERHGADHHTISDVFERALNAGFIQATDYVNIWEAYLDYLRRRVDFSKGESTLTLE
SSRELEELRAAFTRSLDYMKQDVEERFSESGDPSCTIMQVWAKIEALHCKNMQKARELWD
SIMTKGNAKFANMWLEYYNLERSYGDALHCRKALHRAVQCTSDYPEHVCEVLLTFERVEG
SLEDWDAAVQKTETRLNRVNEQRAKVTEKEAHVARQVEEKTEQRRRAKADKKNQKKGQKA
SRPGEKRKAEDKDYEDEWGEESEQPPKRHRREGDQGFRGGCGGAEEFMGTESGLFGRRAP
PGRRQEPPGTKRGQQVAPATLWKTQENDPELRKDDCSVFISNLAFTMEDPEKRLKKLFEP
CGPVQSVRPVYAAKGFRGYCYVQFEGKASVVEALKMDRQEVEGRPMFVSPCVDKNKNPDF
KVFKYNTNLEKHKIFISGLPFSCTKEQLEELCKVHGTIKDIRLVTNRSGKPKGLAYVEFG
DEAQASQAVLKLDGTVLQEHTLSVAISNPPRRNTADKPGFSRPVGAMMPRSMVYGSRGKG
RTQLSLLPRSLHRQTGSESKAENGTAPKPTGGASGDAGIEAQAKPLSNSDFAKMLFKK
NT seq
2877 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaacgggggacgcagatgagactcagttgcaagagatggaggaagaggcagtg
atggaaaatgaaatggattcagatgaagaggaggatttgggaattgaaaattccgacgat
gaaatagacaattcatcagaagacgaaaaagagaatgaagccgaaattcagcgtttggag
gagcagctgtccatcaatgcttttgattacaactgtcatgtggacctcataaaactcctg
aggcaggagggggagctgcctcggctgcgtaaggcaaggcagaagatgagtgagctcttc
ccactcactgaagagatttggctggactggctcaaggatgagatccacctaacagaagaa
gagccgaaccgggagaaagtctatgagctctttgagacggctatgaaagattatatctgc
cctgaaatctggctggaatatgcccaatactctatcgggggcatgggactgcctggtggg
atggagaaggtgaggtccatcttcgagagagccctgacagctgtggggctgcacatgacc
aagggggcgacagtgtgggaggcctacagggagtttgagaacgccatactggcaactgtt
cagccgccccctggcagcgttcccacccgcgagcagcaggagcttctgaacgctcagctc
gagcgcatccacactctgttccgccgccagctgtccatccccttaatggacatggacgga
acatatgccgagtatgaggagtggtctgaccagggggtgtctgatacagtctcccaaaag
tacaagggggccctgcaagaaatggagaagagcaagccttatgaggagactctgatgata
gccgagccacccaagctggcagaatatcagacctacattgactatgagcaaaaggagggt
gacccagcacggatccagatcatctttgagcgggcattgtcagaaaactgcctggtacca
gacatgtgggcaaagtacaccaaatacctggaccgccaactgaagatcaaagacctggtc
ctgtcctctcacgaccgtgcggtcaggaactgcccctggaccatgggcctgtggaagaac
tacctgctggccctggagaggcatggggctgaccaccacactatctcagatgtttttgaa
agggccctgaatgctggtttcatacaagccacagattacgtgaatatctgggaagcgtac
cttgattacctgaggcggcgcgtcgatttcagcaaaggtgaaagcaccttaacattggag
tcgagcagagagctggaggagctgcgggcagccttcacccggtccctggactatatgaaa
caggatgtggaagagaggtttagtgaaagtggagacccctcttgtactatcatgcaggtc
tgggcaaagattgaggccttgcattgtaagaacatgcagaaggccagagaactgtgggac
agcatcatgacaaaagggaacgccaaattcgccaacatgtggttggagtactataacctg
gagaggtcgtacggagatgctctccactgcaggaaagccctccacagggccgtccagtgt
acctccgactacccagagcatgtgtgcgaggtcctgctcacctttgagagggttgagggt
tctctggaggactgggatgcagcggtgcagaagactgagacacggctgaacagagtcaat
gagcagagggccaaggtgacagagaaagaggcccatgtggctcgccaggtggaggagaag
actgaacagcggcggagggccaaggcagacaagaagaaccagaagaagggccagaaagcc
agcaggcctggagagaagaggaaggcagaagacaaggattacgaggatgagtggggagag
gaatcggagcaacctccaaagaggcaccgaagggagggcgaccaaggcttcaggggggga
tgtggtggtgctgaggagttcatggggacagagagtgggctgtttgggaggagagccccc
cctggccgcagacaggaaccccctggtactaagaggggccagcaggtggcgccagccacc
ttatggaagacccaggaaaacgaccccgagctacgcaaggacgactgcagtgtgtttatc
agtaacctggccttcaccatggaggatccagagaagaggctgaagaagttgtttgagccc
tgtggtcctgtccagtcagtgcgccccgtctatgctgccaagggcttcagagggtactgc
tacgtacagtttgagggcaaggcgtctgtggtcgaggccctgaagatggaccggcaagag
gtggaaggcaggcccatgttcgtatcaccctgtgtggataaaaacaagaaccctgatttt
aaggtgtttaagtacaacacaaacctagagaaacacaagatctttatctcgggcctgccc
ttttcctgcaccaaggagcagctagaggagctatgcaaggttcatggcaccattaaagac
atccgcttggtcaccaaccgctcaggcaaacccaagggtctggcgtacgtggagtttggg
gatgaggctcaggcctcccaggccgtgctgaaattggatggcacagtactacaggaacac
acactctctgttgccattagcaacccgcctcgcagaaacactgccgacaagcctggcttc
agcagacccgtgggagccatgatgccccggtctatggtctatggatcgaggggaaaaggg
cgcacccagctctcactactccctcgttcactacatcggcagacaggatcagaaagtaaa
gcagagaatgggactgcacctaaacccacagggggcgcatctggagatgctgggattgaa
gcacaagccaagcccttgtctaattcagactttgccaaaatgcttttcaaaaagtga
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