Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139410996
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Entry
139410996 CDS
T10872
Name
(RefSeq) tuftelin-interacting protein 11
KO
K13103
tuftelin-interacting protein 11
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ocla03041
]
139410996
Spliceosome [BR:
ocla03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
139410996
Other components
Complex C specific factors
139410996
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Motif
Other DBs
NCBI-GeneID:
139410996
NCBI-ProteinID:
XP_071012860
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Position
6:32233633..32243499
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AA seq
841 aa
AA seq
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MSMSHLYGRQGEEEDEGVEVEKFEVTEWDLANEFNPERRRHRQTKEEAVYGIWAERGDSD
DERPSFGGKRSKDYSAPVSFVSAGLRKSAAEEKQQQQIDGGSDDSDNDNTPPAQPPPRDT
APKKLQTGGLFRGNSQSQRTGFAAGIRAGGDLGTWEKHTKGIGQKLLQKMGYVPGKGLGK
NAQGILNPIEAKLRKGKGAVGAYGNERTKQSLQDFPVVDSEEEEEKEFQRELGQWRRDPT
GGGGKKKPKYSYRTVEELKAKGKLAGRTTQTPAGELAQVKVIDMTGREQKVYYSYSQMTN
KLSVPEEAPLSVATREQKTSGFALPELEHNLQLLIDLTEQDILQSSRRLQHERDVVVTLS
HESSGLQTRLGTERDAIQRLEAVLQLVDRFQSGETAPGVGPSLQECAGVFETLQSEFYEE
YKTLGLGDLAAAVVHPLLREKLRTWDPLKDSSYGLEEVGQWRAILESNQLHHANAPEAHM
DPYHRLLWEVWIPVLRVCVSGWQPRMVGPMVDCVEVWAPLLPLWILNHLLEQLLFPRLQR
EVDSWNPLTDTVPIHSWLHPWLPLLQSRLEPLYPPIRSKLANALQRWHPSDGSARLILQP
WRDVFTPGAWEAFMVKNIIPKLALCLGELVINPHQQQMEPFNWVLDWEGMLSPSSLVSLL
DKHFFSKWLQVLCSWLSNSPNYEEITKWYLGWKSIFSDAVLAQPLVKDKFNEALDIMNRA
VSSGLGGGYMQPGARENIAYLTHTERRKDFQYEALQERRDAESVAQRGIGASLPTNFKDL
IQTKAEENNIVFMPLVAKRHEGKQLYTFGRIVIYIDRGVVFVQGEKTWVPTSLQSLIDMA
K
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atgtctatgtcccacctgtacggacggcagggagaggaggaggatgagggggtggaggta
gagaagtttgaggtgacagaatgggacctggccaatgagtttaacccggagcgtcgcaga
cacagacagaccaaagaggaggccgtctatggcatctgggcagagaggggagactccgac
gatgagagacccagcttcggagggaagaggtctaaggactactctgcccctgtgagtttt
gtgagtgctgggctgcgcaagtctgcagcagaggagaagcaacagcagcagatagatgga
gggtcagatgactctgacaatgacaacactccccctgcccaacccccaccccgcgacact
gcacctaagaaactgcagacgggtggtcttttccgtggcaatagccagtcccagaggacg
gggtttgcggccggtatccgagctggaggagacttgggcacttgggagaaacacaccaag
gggattggccagaaactcctccagaagatgggctatgtaccagggaaaggactggggaaa
aacgcccagggtattttgaatcccatcgaggcaaagcttcggaagggaaagggggcggtg
ggcgcctacggcaacgagagaaccaaacagtcactacaggacttccctgtggttgactcc
gaggaggaggaggagaaggagttccagagggaactaggtcagtggcgtagggaccctaca
ggtggtggagggaagaagaaaccaaagtattcctacaggactgtagaggagctgaaggct
aaaggcaagctggctggacggaccacacagacacccgctggagaactggctcaggtcaag
gtgatagatatgacaggcagggaacagaaggtgtattacagctacagtcagatgactaac
aaactcagtgtaccagaggaggctccactgagcgtggccacacgtgagcagaagacgtct
ggctttgccctgccagagctggaacacaacctgcaactactgatcgacctgacggaacaa
gacatactacagtcctcacggcgtctgcagcatgagcgtgacgtggtggtgactctaagc
cacgagagctccggtctgcagacgaggctcgggacagaacgggatgccatccagaggcta
gaggcagtactgcagctggtggatcgctttcagagcggggagactgcacccggggtagga
cccagcctgcaggagtgtgctggtgtttttgagactctacagagtgagttctatgaggag
tacaagactctaggtttgggagatctggctgcggctgtagtacatccactactcagagag
aaactacgcacatgggatcctctcaaggacagttcatatggtctggaggaggtgggtcag
tggcgagccatcctggagtctaatcagcttcaccacgccaacgcccctgaagcacacatg
gacccctaccacaggctgctgtgggaggtgtggatccctgtgctgcgagtgtgtgtgtcg
gggtggcagcctcgcatggtaggacccatggtggactgtgtggaggtctgggcccctctg
ctgcccctctggatactaaatcacctcctggaacaactcctcttccccaggctgcagaga
gaggtggatagctggaaccccctgaccgacacagtgcccatccactcctggctccacccc
tggctgcctctgctccaatcacggctggagcctctctacccgcccatccgcagtaaactg
gccaatgcgctgcagcgctggcatccgagtgacggctccgcccgcctcatcctccaacca
tggagagacgtgttcacgcccggtgcctgggaggccttcatggtcaaaaacataatccct
aaactagctctgtgtctgggggagctggtaataaatcctcaccagcagcagatggagccg
ttcaattgggtgttggactgggagggcatgctgtctccctccagcctcgtatcactgctg
gacaaacacttcttctccaagtggctacaggtgctgtgttcgtggctcagtaacagtcct
aactatgaggagattacaaagtggtacctgggctggaagtccatattcagtgatgctgtt
ctggctcagccactcgttaaggacaagttcaacgaagctctggacatcatgaaccgcgct
gtctcctctggccttggtggggggtacatgcagcctggtgcccgtgagaacatagcatac
ctcacacacacagagcgtcgtaaagacttccagtacgaggctctgcaggagcgccgggat
gctgagagcgtggcgcagcgaggcatcggtgccagcctgcccaccaacttcaaagacctg
atccagaccaaggctgaggagaacaacattgtcttcatgccgctggttgccaaacgccac
gagggcaaacagctgtacacctttggacgtatcgtcatctacatagacagaggagtggtc
ttcgtacagggagagaagacctgggtccctacgtccctacagagtctcatagatatggcc
aagtga
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