Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139411003
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Entry
139411003 CDS
T10872
Name
(RefSeq) repulsive guidance molecule B-like
KO
K06847
RGM domain family member B
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
139411003
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Motif
Pfam:
RGM_C
RGM_N
Motif
Other DBs
NCBI-GeneID:
139411003
NCBI-ProteinID:
XP_071012871
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All DBs
Position
6:32487900..32501436
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AA seq
461 aa
AA seq
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MGRAGCCYRGAERLASSPSLRPLLLLIVALCYGAHRGHCQVATPQCRIQKCTTDFVSLTS
HLTPALDSFAVEFCKALRSYSACTQRTAKSCRGNLVFHSAVLGISDLMTQRNCSRDGPTS
STQPEIQSEPCNYHSRTQHTHPHPHSHTHTPTRPGYLFCGLFGDPHLRTFKDSFQTCKVE
GAWPLIDNDFLSVQVTNVPVVTGSSATATNKITIIFKPFEECTDQRVYQAVTDDLPAAFV
DGTVSSGAPNHNVNGNNGDSTGKVRALWISERSPGHHVELHAGYIGVTVIVRQLGRYLTL
AVRIPEEMAHAYDATQDLQLCLNGCPTSERIDRGGHLPLPLPLPPPALGLHLQQPHGQGK
GQPSHTAPYSAPQWFSVEGARARCREQLELQDIYFHSCVFDLMTTGDANFTAAAFSALKD
MESLHPHRERWRIFPQSSADTSQPITWLLLLTLFALGSALV
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atggggagagccggatgttgttaccgcggggctgagcgcctcgcatcctcgccttccctg
cgaccgctgctgctgctgatcgtcgctctctgttacggggcgcacagaggtcattgccag
gtggccacccctcagtgtcgtatccagaagtgcaccacagactttgtgtccctgacgtct
cacctgaccccagcgctggatagctttgccgtagagttctgtaaggctctgaggtcctac
agcgcctgcacccagaggacagccaagtcctgcaggggcaacctggtcttccactctgcc
gtcctgggcatctcagacctcatgacccagagaaactgctcccgtgacgggcccacctcc
tccacacaacccgagatacaatcagagccctgcaactaccacagccgcacccagcacact
cacccacaccctcactctcacacgcacactcccacgcggccgggttacctgttctgcggg
ctgtttggggatccccatctgcggacgtttaaggacagcttccagacctgcaaggtggaa
ggggcgtggccgctgattgataacgacttcttgtctgtgcaggtgaccaacgttcctgtg
gtaacgggatccagcgccacagcgaccaataagatcaccatcatattcaaaccctttgag
gagtgtacagaccagcgtgtttaccaggcagtaacagatgacctgcccgctgccttcgta
gacggtaccgtgagcagcggagcccccaaccacaacgttaacgggaataacggtgactct
accggtaaggtacgggcgctgtggatctcggagcgtagccccggtcaccacgtggagctg
cacgccggctacatcggcgtgacggttatcgtacgacagctggggcgctacctgaccctg
gcggtgcgcatcccggaggagatggcccatgcctacgacgctacgcaggacctgcagctc
tgcctcaatggatgtcccacctcggaacgcatcgaccggggaggtcacctgccactgcct
ctccctctaccccctccagccctgggcttacatctccagcagccacacggccagggcaag
ggccagccctcccacacggctccctacagcgccccccagtggttcagtgtggagggtgca
cgggcacgctgcagggagcagctggagttacaggatatttatttccactcatgtgtgttt
gacctcatgaccaccggggacgctaacttcacggcagcagcgttcagcgctctgaaggac
atggagagtctccacccccaccgggaacgctggaggatcttcccgcaaagctccgccgac
acctcccagcctatcacatggctcctactgctcactctctttgcgctcggctctgcactg
gtatag
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