Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139411007
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Entry
139411007 CDS
T10872
Name
(RefSeq) thrombospondin-4-B-like
KO
K04659
thrombospondin 2/3/4/5
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04145
Phagosome
ocla04510
Focal adhesion
ocla04512
ECM-receptor interaction
ocla04820
Cytoskeleton in muscle cells
Brite
Membrane trafficking [BR:
ocla04131
]
Endocytosis
Phagocytosis
Opsonins
139411007
Exosome [BR:
ocla04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
139411007
Exosomal proteins of colorectal cancer cells
139411007
Exosomal proteins of bladder cancer cells
139411007
Glycosaminoglycan binding proteins [BR:
ocla00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
139411007
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139411007
NCBI-ProteinID:
XP_071012877
LinkDB
All DBs
Position
6:complement(32770816..32782766)
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AA seq
947 aa
AA seq
DB search
MGVWIRKVVLSLLMLQLATTVTAQGIVYDLLVSPDCLPDLTQGGLKNKGLDEAFLLSSFR
LHSKTPSHLYSIINPRDNSKYLEFTLQAKLNKVTIRYQKTDGRAGTTSFSHPSLADGKEH
HVMIHASGLQRGPGRMAVYVDCRLAHTVDELPAAFGSLTPGHNKVALRTLQPTGQDELTD
LKLVIEDTLDNVATLQDCSIQQSESLGTIQLLGLQAGGQDPSQMLELHKMMSEMKDLLLQ
QIKETTFLRNTISECLACGLGGNMASGPGTGPQSGPSKCSPGMCFNQDMCIPAEGGRFTC
APCPDGYTGDGVHCDDVNECQFNPCFPGVRCVNTAPGFHCERCPLGYTGLEINGVGVSYA
QSHKQVCDDIDECQGPPDNGGCTANSHCHNTRGSFRCGECKSGFSGDQVSGCSGGRLCGN
GQPNPCDSNAQCVVERDGSVSCECDIGWAGNGYVCGKDTDIDAYPDDKLRCRDNNCKKDN
CMFVPNSGQEDADRDGLGDACDDDADSDGIVNIEDNCWLHPNVNQKNSDKDLHGDACDNC
LTTENPDQRDTDKDGLGDDCDDDMDGDGLKNILDNCQRVANLDQRDRDNDGVGDACDSCP
DMVNPNQSDVDDDLVGDTCDTNIDSDGDGHQNTKDNCPTVINSSQLDTDKDGQGDECDDD
DDNDGILDQADNCRLVVNPDQTDEDNDGVGDACAGDFDQDKVIDRIDNCPENAEVTLTDF
RAYQTVVLDPEGDAQIDPNWVVLNQGMEIVQTMNSDPGLAVGYTAFSGVDFEGTFHVNTV
TDDDYAGFIFGYQDSSSFYVVMWKQTEQTYWQAVPFRAVAEPGIQLKAVKSKTGPGEYLR
NSLWHTGDTNDQVRLLWKDKRNVGWKDKVSYRWYLQHRPQVGYIRARFYEGPNLVADSGV
KIDNSMRGGRLGVFCFSQENIIWSNLKYRCNDTIPEDYQEYSAQNTE
NT seq
2844 nt
NT seq
+upstream
nt +downstream
nt
atgggggtgtggatcagaaaagtggtcctctctctgctgatgctacaactggccacgact
gtcacagcacaaggcattgtgtacgacctgctggtgtctccagactgcctgcctgacctg
acgcagggagggctgaagaataaaggtctggatgaggccttcctcctctcctccttcagg
ctccatagcaagaccccctctcatctctacagcatcatcaaccccagggacaacagcaag
tacctggagttcaccctgcaggccaaactcaacaaggtgacgatccgttaccagaagact
gatggtagggctggcaccaccagttttagccacccctctctggcggacggcaaggagcat
catgtgatgatccatgccagcggtctgcagagaggaccaggtcgtatggcggtctacgta
gactgtagactggctcacactgtggacgagctgcctgctgccttcgggtcgctgacacct
ggacacaacaaggtggcgcttaggaccctgcagcccaccgggcaggatgagttgacggac
ctgaaactggtgatagaggacacgttagataacgtcgctacgctccaggactgcagcata
cagcagagcgagtctctgggtactattcagctactgggcctccaggcgggcggacaggat
ccgtctcagatgttagagctccacaagatgatgtcagagatgaaggacctgctcctccag
cagattaaggagaccacattcctcagaaacaccatctcagagtgtctggcatgtggtctg
ggtggcaacatggcgtcaggcccaggtacaggtccacagtcaggcccgtccaagtgtagt
ccaggtatgtgtttcaatcaggacatgtgtatcccggccgagggaggacgcttcacctgc
gccccctgccccgacggatacactggagacggagttcactgtgatgacgtgaacgagtgc
cagtttaacccctgcttccccggtgtgaggtgtgtgaacacagctcctgggttccactgt
gagagatgccctctgggatacactggtcttgagatcaacggagtgggagtgtcctacgca
cagtcacacaaacaggtgtgtgatgacatagatgaatgccagggtcctcctgacaacgga
ggctgcaccgccaactctcactgccacaacaccaggggttcattccgttgtggggagtgt
aagagtggcttctctggggaccaggtgagcggctgcagtggtgggaggctctgtgggaat
ggccagcccaacccctgtgacagcaatgcacagtgtgtagtggagagagacgggagtgtt
agctgcgagtgtgacatagggtgggcaggtaatggctatgtgtgtgggaaggacacagac
atcgatgcttacccagacgacaagctaaggtgcagggacaacaactgtaagaaggacaac
tgtatgtttgttcctaactctggccaagaggacgcagacagggacgggctcggggacgcc
tgtgatgatgacgctgatagcgacggcatcgttaacatagaggataactgttggctgcat
cctaacgtgaaccagaagaacagcgataaggatctccatggcgacgcgtgtgacaactgc
ttgacgacggagaaccctgatcaacgagacacggacaaggacgggctaggcgatgactgt
gacgatgacatggatggagacggcctgaagaacattctggataactgccagcgtgtggcc
aacctagaccagagggacagagacaacgatggggtgggagacgcctgtgacagctgtcct
gacatggtcaaccccaaccagtcagatgttgatgatgatcttgtaggagacacatgtgac
accaacatagacagtgatggggacggtcaccagaacactaaggacaactgtcctacagtc
atcaactcctcccagctggacacagataaggacggacagggagacgagtgtgacgatgac
gatgacaacgacggtatcctggaccaagcagacaactgcagactggtggtcaaccctgac
cagacagatgaggataatgacggcgtgggtgatgcgtgtgcaggggactttgaccaggac
aaggtgattgacaggatagacaactgtccagagaatgctgaggtcaccctgacagacttc
agagcctatcagacggtggtactggaccctgagggtgacgcccagattgatcccaactgg
gtggttctcaaccagggtatggagatagtccagactatgaactctgaccctggcctcgct
gtaggctacacagcgttcagtggggtggactttgaggggacgttccacgtgaacacggtg
actgatgatgactatgcaggcttcatcttcggctaccaggactcctcctccttctatgtg
gtcatgtggaaacagactgagcagacctactggcaggctgtacccttcagagctgtggct
gagcctggcatacagctcaaggctgtgaagtctaagacaggtccaggggagtatctgagg
aactccctgtggcatacaggagacaccaacgaccaggtacgcctgctgtggaaggacaag
aggaacgtgggttggaaggacaaggtgtcctaccgctggtatctacagcacagaccacag
gttggatacatcagggcgcgtttctatgagggtcccaacctggtagcagactctggggtg
aagatagacaacagtatgcgaggagggagactgggagtcttctgtttctcccaggaaaac
atcatctggtccaacctcaagtaccgctgcaatgacaccatccctgaagattaccaggag
tacagtgcccagaacactgaataa
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