Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139411016
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Entry
139411016 CDS
T10872
Name
(RefSeq) synaptic vesicle glycoprotein 2Ca
KO
K06258
MFS transporter, VNT family, synaptic vesicle glycoprotein 2
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
139411016
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ocla02000
]
139411016
Transporters [BR:
ocla02000
]
Major facilitator superfamily (MFS)
Protein transporters
Vesicular neurotransmitter transporter (VNT) [TC:
2.A.1.22
]
139411016
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Paralog
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GFIT
Motif
Pfam:
MFS_1
LD_SV2
Sugar_tr
MFS_2
Pentapeptide_3
Pentapeptide_4
Pentapeptide
DUF6077
Motif
Other DBs
NCBI-GeneID:
139411016
NCBI-ProteinID:
XP_071012898
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All DBs
Position
6:33235100..33258909
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AA seq
737 aa
AA seq
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MDDSYESRTSLVKGAKDIVKEAKRHAVKKVNKVVDSTTDEYSQRKYSRFEDEVDEGDDFY
RNPPRQDGGYNDNDQASDASDATEGHDDEDEIYEGEYQGIPAAGDRRAREGQVALGQPVT
DSLKDRKELEQERQADEEELAQQYELIIQECGHGRFQWQLFLVLGLALMSDGVEVFVVGF
VLPSAETDMCALGGSNSRSGWLGSIVYLGMMVGAFFWGGMSDKVGRRQCLLICMCVNGFF
AFLSSFVQGYGIFLLCRVIAGFGTGGVVPIVFSLFAEVLSREKRGEHLSWLCMFWMIGEI
YASAMAWAIIPHYGWSFSMGSAYQFHSWRVFVVVCALPCVCAVVALTFMPESPRFYLEVG
KHDEAWMILKQIHDTNMRARGQPEKVFTVNRIKIPKHLDELVEIKSESRNPVSKALFRSK
TELCGIWVNFMKCFDYPLKESTIKLAIVWFTLSFGYYGLSVWFPDVIKHLQADDYASKVK
IHSNERIEDFTFNFTMENQIHTNGVFINDRFVNMKLKSITFIDSTFRNCYFDDVTSVGSY
FRNCTFIEAFFYNTDIDDSKLIDDTEVINSTFHHNKTGCQMTFDDDYSAYWVYFINFLGT
LAVLPGNIVSALLMDKIGRLSMLGGSMVLSGISCFFLWFGTSESMMIFMLCLYNGLSISA
WNSLDVVTTESFPTDRRGTGFGFCNALCKLAAVLGNLIFGSLVGITKSIPILLASSVLVC
GGLVGLRLPDTRANVLM
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atggacgacagctacgaaagcaggacttccttagtgaagggggccaaggacatcgtcaag
gaggccaagcggcacgctgtgaaaaaggtcaacaaggtcgtggacagcaccacagacgag
tactcccagcgcaaatatagccgtttcgaggacgaggtggacgagggggacgatttttac
cgtaaccctcccaggcaggacggaggctacaatgacaacgaccaggccagtgatgccagc
gacgccacagagggccatgatgacgaagatgagatctacgaaggggagtaccagggaatc
ccagcggccggagacaggcgggccagggaggggcaggtggctttggggcagcccgtcaca
gacagcctgaaggaccgtaaggagctggagcaggagaggcaggcggacgaggaggaactg
gcccagcagtacgagctgatcatccaggagtgtggccacggcaggttccagtggcagctg
ttcctggtgctgggcctggccctcatgtcggatggggtggaggtgttcgtggtggggttc
gttctacccagcgccgagacggacatgtgtgctctgggtggctccaactccagatctgga
tggctaggcagtattgtgtacctggggatgatggtgggggcgttcttctgggggggcatg
tcggacaaggtgggccgcagacagtgtctgctcatctgcatgtgtgtgaacggcttcttc
gccttcctctcctccttcgttcagggttatggcatcttcctactctgccgcgtgatcgca
ggctttggaacagggggagttgtacccatcgtcttctccttatttgcggaggtgctgtcc
agagagaagagaggggagcacctgagctggctctgcatgttctggatgattggagagatc
tatgcttcagccatggcctgggccattataccacactatggctggagtttcagtatgggt
tctgcctaccagttccacagttggagagtgtttgtggtcgtctgcgccctgccctgcgtt
tgtgctgttgtggctctcactttcatgcccgagagccccaggttttacctggaggtgggg
aagcacgacgaggcttggatgatcctcaagcagatccatgacaccaacatgcgagcgcgt
gggcagccggagaaagtcttcaccgtgaacagaatcaagatccccaagcatttggatgag
ctggtggagattaaatcagagtcgaggaacccagtctccaaggccctcttcaggtccaag
acagagctatgtgggatctgggttaactttatgaagtgtttcgactaccctctgaaagaa
agcactatcaagctagctattgtttggtttactctgtcctttgggtactacggcctgtct
gtgtggtttcctgacgtcatcaagcacctccaggcagatgactacgcctccaaggtgaag
atccacagcaacgaacgcatcgaggacttcaccttcaatttcaccatggagaaccagatc
cacaccaatggtgtcttcatcaacgacagatttgttaatatgaagttgaagtccatcacc
ttcattgactccaccttccggaactgctactttgacgacgtgacctcggtgggatcctac
ttccggaactgtaccttcatcgaggcgttcttctacaacactgacatcgatgactccaaa
ctgatagatgacacagaggtgatcaacagcacgtttcaccacaacaagacgggctgtcag
atgacatttgatgacgactacagcgcctactgggtctacttcatcaacttccttggaact
ctggctgttctgcccggcaacatcgtctcggcactgctcatggataaaatcggacgcctt
tccatgttaggtggctcaatggttctgtcagggatcagttgtttcttcctgtggtttggc
accagtgagtcgatgatgatcttcatgctgtgcctttacaacggcctgagcatatcagcc
tggaactcactggacgtggtcaccacagagtccttccctacagacagaagagggacaggt
tttgggttctgtaacgctttgtgtaagctggctgcagtgttgggaaacctgatctttggt
tctctggttggcatcaccaagtccatccccatcctcctggcctcatctgtgctggtgtgt
ggaggcctggtggggctccggctgcctgataccagggccaacgtactcatgtag
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