Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139411034
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Entry
139411034 CDS
T10872
Name
(RefSeq) clathrin heavy chain 1-like isoform X1
KO
K04646
clathrin heavy chain
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04142
Lysosome
ocla04144
Endocytosis
ocla05100
Bacterial invasion of epithelial cells
Brite
Membrane trafficking [BR:
ocla04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
139411034
Exosome [BR:
ocla04147
]
Exosomal proteins
Proteins found in most exosomes
139411034
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139411034
NCBI-ProteinID:
XP_071012926
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Position
6:33690193..33731430
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AA seq
1683 aa
AA seq
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MAQILPIRFQEHLQLQNLGVNPANIGFSYLTMESDKFICIREKVGEQNQVVIIDMADPNN
PSRRPISADSAIMNPASKVIALKAAKCLQIFNIEMKSKMKAHTMTEEVMFWKWISVNTVA
LVTEAAVYHWSMEGDSQPIKVFDRHASLAGCQIINYRTDEQQKWLLLIGISAQQNRVVGA
MQLYSVDRKVSQPIEGHAAAFGEFKVEGNTKASTLFCFAVRSQAGGKLHIIEVGQPATGN
QPFTKKAVDVFFPPEAQTDFPVAMQIGTKHGVIYLITKYGYIHLYDLESGVCIYMNRISA
ETIFVTAPHELTSGIIGVNKKGQVLSVCVEEENIVNYATNVLQNPDLGLRMAVRSNLAGA
EELFVRKFNTLFAQGSYSEAAKVAASTPKGILRTAETIRKFQSVPAQPGQASPLLQYFGI
LLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECCEELGDLVKAVDPTLALSVYL
RANVPSKVIQCFAETGQFQKIVLYAKKVGYSPDWVFLLRNVMRVSPEQGLQFSQMLVADE
EPLANINQIVDVFMEGSLIQQCTSFLLDALKNNQPAEGHLQTRLLEMNLIHAPQVADAIL
GNQMFSHYDRAHIAQLCEKAGLQQRALEHYTDLFDIKRAVVHTHLLNPEWLVNFFGALSV
EDSVECLRAMLSANIRQNLQLCVQVASKYHEQLGTNTLVELFESFKSYEGLFYFLGSIVN
FSQDPDVHFKYIQAACKTGQIKEVERICRESNCYDPDRVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNTLQKYIEIYVQKVNPSRLPVVIGGLLDVDCAEDVIKNLIMVVRGQF
STDELVAEVEKRNRLKLLLSWLESRIHEGCEEPATHNALAKIYIDSNNTPERFLKENTFY
DSAVVGKYCEKRDPHLACVAYERGQCDLDLIKVCNENSLFKSEARYLVRRKDPELWANVL
EENNPYRRQLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSE
HRNLQNLLILTAIKADRTRVMEYVNRLDNYDAPDIANIAISNELFEEAFAIFKKFDVNTS
AIQVLIEQISNLDRAYEFAERCNEAAVWSQLARAQLQRDLVKEAIDSYIKADDPSAYMEV
VSAASKNNNWEDLVKFLQMARKKARESYVETELIFALAKTVRLAELEEFVSGPNNAHIQQ
VGDRCYEEGMYDAAKLLYNNVSNFARLASTLVHLGEYQAAVDSARKANSTRTWKEVCCAC
VDGEEFRLAQICGLHIVIHADELEELISYYQDRGYYEELIGLLEAALGLERAHMGMFTEL
AILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQSHLWAELVFLYDKYEEYDNAVLTMMS
HPTDAWKEVQFKDIIAKVANVELYYKSLSFYLDYKPLLTNDLLTILSPRLDHNRTVSYFT
KVNQLKLVKPYLRSVQSHNNKGVNEALNNLLTEEEDYQGLRASIDAYDNFDTIGLAQRLE
KHELIEFRRIAAYLYKGNNRWRQSVELCKKDKLYKDGMLYAAESKDAELAETLLQWFLEE
GRKECFAACLFASYDLLHPDVVLELAWRHNIMDFAMPYFIQVMREYLTKVDEVEEKVTVD
KLEESESQRKTEEEVTEPTPIVFGQQLMLTAGSAPVAPQPGYPGGFGYAAPGYSPQPPYN
YNM
NT seq
5052 nt
NT seq
+upstream
nt +downstream
nt
atggcccagatactgccgatacgatttcaggaacatctgcagctgcagaacctgggggtg
aacccggctaacattggtttcagctacctgaccatggagtctgacaagttcatctgcatc
cgggagaaggtgggcgagcagaaccaggtggtgatcatagacatggctgaccccaataac
cccagcagacgtcctatctctgctgacagtgccatcatgaaccctgccagcaaggtcatc
gccctcaaagctgctaagtgcctgcagatcttcaacattgagatgaagagtaagatgaag
gctcacaccatgactgaggaagtcatgttctggaagtggatctctgtcaacaccgtcgcc
ttggtgactgaagcggctgtctaccattggagcatggagggggactcgcagcccatcaaa
gtgtttgatcggcacgcaagtctggccggatgccagatcataaactacagaacagacgaa
cagcagaagtggctcctccttatagggatctcggcacagcaaaaccgtgtggtgggggcc
atgcagctgtactctgtggacaggaaggtgtcccagcccatcgaaggccatgctgcagcc
ttcggagagtttaaggtggagggcaacaccaaagcctccactctgttctgcttcgctgtg
cgcagccaggctgggggcaagctgcacatcatagaggtgggtcagccggctacagggaac
cagccgtttactaagaaggctgttgacgtgttcttcccacctgaggctcagacagacttc
cccgttgccatgcagattggcaccaagcacggtgtgatctacctgatcacgaagtatggc
tacatccacctgtacgacctggagtcaggagtgtgtatttacatgaaccgcatcagcgcc
gagaccatcttcgtcaccgccccccacgaactcacctccggcatcatcggggttaacaag
aagggacaggtgttgtcagtgtgtgtggaggaggaaaacatagtgaactatgccaccaac
gtgctgcagaacccagacctgggcctgaggatggccgtgcgttctaacctggccggggct
gaggagctgtttgtcaggaagttcaacacactgttcgcccagggctcctactccgaggct
gccaaggtggccgcatccacacccaagggtatcctgcgcacagcggagaccatccgtaag
ttccagagcgtgccagcccagccgggccaggcctctcctctgctgcagtactttggcatc
ctgctggaccagggccagctcaacaagtttgagtctctggagctgtgccggcccgtgcta
cagcagggacgcaagcagctgctggagaagtggctgaaagaggacaagctggagtgttgt
gaggagcttggtgacctggttaaggcagtagatcctacgctagccctcagtgtctacctc
agagccaacgtacccagcaaggtgatccagtgctttgctgagaccggacagttccagaag
atagtgctctacgccaaaaaggtgggctactctccagactgggtgtttctgttgaggaat
gtgatgcgggtcagtccagaacagggtctacagttctctcagatgctggtggcagatgag
gagcccctggccaacatcaaccagatagtggatgtgttcatggagggaagtctgatccag
cagtgtacctccttcctattggacgctctgaagaacaatcagccagccgagggacaccta
cagacacgcctactggagatgaacctcatccacgccccccaggtagccgacgcgatcctt
ggcaaccagatgtttagtcactatgaccgagcccacatcgcccagctgtgtgagaaggct
ggactgcaacagagggctctagagcactacactgacctgttcgacatcaaacgggctgtc
gtacacacacacctgctcaaccctgagtggctggtgaatttctttggcgccctgtcagta
gaggactcagtagagtgtcttcgggccatgttatcagccaacatcagacagaaccttcag
ctgtgtgtccaggtggcatctaaataccacgagcagctgggaacaaacaccctggtggag
ctctttgagtccttcaagagctacgagggtctgttctacttcctgggctccatagtgaac
ttcagccaggaccctgacgtccattttaaatacatccaggcggcctgtaagacaggccag
atcaaggaagtggagcgcatctgtagagagagcaactgttacgacccggacagggtcaag
aacttcctcaaggaggctaaattgacagaccagctgccgttgatcatagtgtgtgaccgc
tttgactttgtccatgacctggtgctctatctctaccgcaacacactgcagaagtacatc
gagatttacgttcagaaggtgaaccccagccgtctgcctgtggtgataggaggtctgttg
gatgtagactgtgctgaagacgtcattaagaacctgatcatggtggtgagaggacagttc
tccactgatgagctggtggcagaggtggagaagaggaacagactgaagctgttgttgtcg
tggcttgagtctcgtatccacgagggctgtgaagagccggctacccacaatgccttggct
aagatctacattgacagtaacaacaccccggagcgcttcttgaaggagaacaccttctac
gacagcgctgtagtggggaagtattgtgagaagagagacccccacctcgcctgtgtcgcc
tatgagaggggccagtgtgacctggaccttatcaaggtgtgcaatgagaactccctgttc
aagagtgaggctcgctacctggtccgacggaaagacccagaactatgggccaacgttctt
gaggagaataacccttatagacgccaactcatagaccaggtggtgcagaccgctctgtca
gagacccaggacccagaggaggtgtctgtgacggtcaaggccttcatgacagctgacctg
cccaatgagctcattgaactactggagaagattgtactggacaactcagtcttcagcgag
caccgaaacctccagaacctgttgatcctgacggccatcaaggcagaccggacgcgtgtg
atggagtacgtcaaccgcctggacaactacgatgcccccgacatcgctaacatcgccatc
agcaacgagctctttgaggaggccttcgccatcttcaagaagtttgacgtcaacacctcc
gccattcaggtcctgatcgagcaaatcagtaacctggacagagcctatgagtttgcagag
cgttgtaatgaggctgcggtatggagtcaactggccagagcccagctccagagagacctg
gttaaagaggccatcgattcctacatcaaagccgacgacccgtcagcctacatggaggtg
gtcagcgctgccagcaagaacaataactgggaggatctggtgaagttccttcagatggct
cgtaagaaggccagagagtcatatgtagagacagagctcatctttgctctggctaaaact
gtcagactggccgaactagaggaatttgtcagcggccctaacaacgcccatatacaacag
gtaggagataggtgttatgaagaagggatgtacgatgctgccaagctgctgtacaataac
gtgtccaactttgcccgcctggcatccacgctggtacacctaggagagtaccaagctgct
gtggacagcgccaggaaagccaacagcacacgcacatggaaggaggtgtgttgtgcgtgt
gtggatggggaagagtttcgattggctcagatctgtggtctacacattgttatccacgct
gatgaactggaggagctcatcagctactaccaggaccggggttactatgaggagctgata
ggcctgttggaggccgcgttgggtttggagcgcgctcacatgggcatgttcacagagctg
gccatcctctactccaaatttaaaccccagaagatgagagaacacctggaactcttctgg
tcccgcgtcaacatccctaaggtgctgcgagcggcggagcagtcccatctgtgggcggag
ttagtgtttctgtatgataaatacgaggaatatgacaacgctgtcctcacgatgatgtca
caccctacggacgcttggaaggaggtgcagttcaaggacatcattgccaaggtggccaat
gtggagctgtactacaaatccctttccttttacctggattacaaacctctgctgacgaac
gaccttctgaccatactgtcaccacggttagaccacaaccgcacggtcagctacttcacc
aaggttaaccagttgaagttggtaaagccttacctgaggtctgttcagagtcataacaac
aagggagtcaacgaggccctcaataacctgctgacagaggaggaggactaccagggtctg
agggcgtctatcgatgcatatgataactttgacaccattggtttggcccagagactggag
aagcatgagctgattgagttcagacgcatcgcagcatacctctacaaaggcaacaaccgc
tggagacagagcgtggaactctgcaagaaggacaaattatacaaggatggaatgctgtac
gctgctgagtctaaggatgctgagctggctgagaccctgttgcagtggttcctggaggag
ggcaggaaggagtgtttcgctgcctgtctgtttgcctcctacgacctgttgcaccctgac
gtggtgctggagctggcctggagacacaacataatggactttgccatgccatacttcatc
caagtcatgagggagtacctcaccaaggttgatgaggttgaggagaaggtgacggtggat
aaactggaggagtcagaaagccaaaggaagactgaggaagaagtcacagaacccaccccc
atagttttcggtcagcagctgatgttgacggcaggctcggctccagtggcaccccagcct
ggatacccaggaggcttcggatacgctgccccaggctactccccccagcccccctacaac
tacaacatgtag
DBGET
integrated database retrieval system
