KEGG   Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139411072
Entry
139411072         CDS       T10872                                 
Name
(RefSeq) methylcytosine dioxygenase TET3 isoform X1
  KO
K24309  methylcytosine dioxygenase TET2/3 [EC:1.14.11.80]
Organism
ocla  Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:ocla00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ocla03000]
    139411072
   03036 Chromosome and associated proteins [BR:ocla03036]
    139411072
Enzymes [BR:ocla01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.80  methylcytosine dioxygenase
     139411072
Transcription factors [BR:ocla03000]
 Eukaryotic type
  Zinc finger
   CXXC CpG-binding proteins
    139411072
Chromosome and associated proteins [BR:ocla03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    139411072
SSDB
Motif
Pfam: Tet_JBP
Other DBs
NCBI-GeneID: 139411072
NCBI-ProteinID: XP_071012995
LinkDB
Position
6:36475533..36521429
AA seq 1987 aa
MAGKVGHIEDYRKAWSVKPSLATETVSDTGSVDGPRRGGQMETGSHDRLEEGGSLSLEPT
NGVIRQPSDTNEEGGAGLDTQMEPHRSGSVPPGQGWVPGQGKAPQPQKQLPCSGWSSSGR
TPGKPVHEADMEDACNLVAFSASVNVGSLAPIPEAQSYTAQLYEKFNQEMGTAKGAAAQA
RLQAPEGGDQASPPEDLNTLQTTLKTALKTALSQARHGHKPPNCDCDGPDCPDYLEWLEK
RLKQAGAGEEQDNNTPCSKMAADTPPHQQPPHSQLPPHPHHHPHPHVNGGNPPSCPPLHP
HQQGQHPGSVPCSPQVLSIAKEKNVSLQTAIAIEALTQLSATAPQTVVPPAQASSTSHQQ
PPLHPQHGNRLLPSSPGPMSSLSSSRSQSVPPGLYPQQSSGSWEQQHRPQSQGHPAHASP
LPSSTLLFPGQTQAGSPHPQQWQQQQAPGGIQEQRNRWMMMNSDSQQSHFAPPSGGHSVG
DPMSELKQLLGDSSGKYINDPFKLPVPHHHIKQEPGMPQVKQEVNSGEYQSSACAYMGGR
YGLMNGQQQPGYPGPPLSAGSTAIHYSTQTALQQHLHHKRNLFSNPPGPPGLCPPRPTQA
CQNLRKWWPQQMGPEGHLIPVAIKQEPKEPKRRKSTVGTSPLLKQPGMLHYPGPKPKTIV
IKKTKQKASLPTFLPHSQISIQKPSPLTMIGALPLASAHSGSLPFPTFPLLSNPTQAAAG
LPTPAQSQVSILNSSIARSVTAPAFSVNSPAVSTPLPLPAAPDAPASSGEAGATQTSTTS
QSIPGLSSLDPKFEELILQFEAEFGDSSSSAPVPCPPQIQPQDQSPSASAQPVVIESQPN
ITSGQARTASPSSTATQSCSPTPLASTTAPPADQDMEVDKENVTRGVSEASYTSATPPCI
ESPMEEQPEGAQLPLSLRQEVHLEQQQHRVLEDPFTVPLSPSMSPLPKRMKIETNGNVAV
LSTTGSFSEGGEDDTPTKDGFPLNPSLKGFLESPLRYLDTPTKSLLDMPAKDLQAEFPTC
DCVEQILEKDEGPYYNHLGSGPTVASIRDLMETRYGEKGDAIRIEKVVYTGREGKSSQGC
PIAKWVIRRGSDTEKLLCLVRPRAGHHCPNAFIIILIMAWEGVPRALGDKLYRELSATLT
QFGNPTSRRCGLNDDRTCACQGKDPDSCGASFSFGCSWSMYFNGCKYARSKTPRKFRLAG
DHPQEEDQLRDNFQDLATEVAPLYKQLAPQAYSNQCQNETKATDCRLGLKEGRPFSGVTA
CMDFCAHAHKDQHNLYNGCTVVCTLTKEDNRTVGEIPEDEQLHVLPLYKAALTDEFGSEE
GQRQKMRTGAIQVLNNFRREVRKLPERAKSCRQRRLDAKNRASEKKKGKQQPPTPTETPE
KPGIKMEVRHAGSPVRQNGNKAIPKQEVKPTIKKEPVDQRFQPFHGQLEGYPAQAADPYH
VYPSRPGYYARGGLSSNGQPLAIPPPPGPVNGYRPNLPAALPYSYYTYPPNPSTLFPHEL
TYEGCNGSWHHMGPKFSPSPVDKKPDVQSLQARLAHSYSSPGHLEQQQHGDPANQHQRSA
YPHPHQPDYNQSRPSSASSEPSHRGTPVIKQEPMDMPVYKEVNAQSCPSMPSTTLQPGAA
GGPWHGHKPNGIRVPSSWEGNLQPPGPPEAPFTSDKQQFHQQGPRQTFQSPYLQEQHQHP
PQQPSPYSQQWNSYHGPNTPTASPAPSPSPSIKIPPSPFPSSHPGTPHHWDSPDSSPQPK
AWPMGMVPAGYSPSPVGGFPDKMWSKAGESWGSTPLGLQEKAWKSSGGSMAGTPSPAPEG
RLFPDALQQSDGQSQAETPRNLEEEERWSDSEHNFLDPSIGGVAVAPAHGSILIECARRE
LHATTPLKRPDRSHPTRISLVFYQHKNMNQPCHGQWIWEAKMKMLAERARERQQEAALLG
LPYDDIKPGKKRKLGATAAGASPGPGQTTDKREGPVTRLASTRHTTSTITVSPYAFTTLT
GPYSHFV
NT seq 5964 nt   +upstreamnt  +downstreamnt
atggctggaaaggtgggacatattgaggactacaggaaagcctggtcggtaaagcccagt
ctggcaacagagactgtttcggacactggttcagtggatggccccagaagaggaggccag
atggaaactgggtcacatgaccgcctcgaagaaggcggttcgttgagcctggaaccgacc
aatggggtgatccggcaacccagtgacaccaatgaagagggtggagccggcctggacacc
cagatggagccccatcggtcaggtagtgttcccccgggacagggttgggtacctgggcag
ggcaaagcccctcaaccccagaagcagctgccctgcagtggctggagcagtagtggtagg
actcctgggaagcctgtccacgaggcagacatggaggacgcatgcaatctggtagccttc
tcagccagcgttaatgtgggctccctggcccccatccccgaggcccagtcctacaccgcc
cagctgtatgagaagttcaaccaggagatgggcactgctaagggggccgcggctcaagcc
aggctccaagccccagagggaggggaccaggctagcccaccagaggacttgaacaccctg
cagaccaccctgaagactgccctgaagactgccctgagccaagcgaggcacggccacaag
cccccaaactgtgactgtgatgggcccgactgcccagactacttggagtggctggaaaag
aggctcaaacaggcgggggcaggggaggagcaggacaacaacacaccctgttccaagatg
gccgccgacacgccgcctcatcaacagccaccacactcacagctgccccctcacccccac
caccatcctcacccccatgtcaatggaggtaacccaccctcctgtccaccccttcaccca
caccaacagggccaacacccaggctctgtcccctgctcccctcaggtcctctccatcgcc
aaggagaagaacgtcagtctgcagacggccatagctatcgaggccctgacccagctgtct
gccaccgccccccagactgtggtccctcctgcccaggcctcctccaccagccaccaacaa
ccccctctacacccccagcacggcaaccgcttgctcccgtcctcccctggccccatgtcc
tctttgtcctcctcgcggtcacaatctgtcccccctggactgtacccccagcagagctcc
gggtcgtgggagcagcagcacagaccccagtcccagggtcatccggcccacgcctcccct
ctcccgtcctccactttgcttttccccgggcagacccaggcaggcagcccccaccctcag
cagtggcagcagcagcaggcccctgggggaatccaagagcagaggaaccggtggatgatg
atgaactcagactcccagcagtctcacttcgcccctccatctggtggccacagcgttggc
gaccccatgtccgagctcaaacagctactgggggactccagcggaaagtacataaatgac
cccttcaagctgcccgtcccacaccaccacatcaagcaggaaccagggatgcctcaggtc
aagcaggaggtaaactctggggagtaccagagctctgcctgtgcctacatgggcggtcgc
tacggcctgatgaacggccagcagcagcctgggtaccctggtccacctctctccgcgggc
agcacagccatccactactccacccagacagccctgcagcagcaccttcaccacaagagg
aacctcttctctaacccccccggccccccaggcctctgccctccacggcctacccaggcc
tgccagaacctccgcaagtggtggccccaacagatgggccccgagggccacctcatccct
gtggccatcaagcaggagcccaaggagcccaagaggaggaagagcacggtggggacatcg
ccgctcctcaagcagccggggatgctgcactatccaggtccaaaacccaagaccatagtc
atcaagaaaaccaagcagaaggcctccctgccaaccttcctgcctcacagccagatctcc
atacaaaaaccgtctccactcaccatgatcggagccctgcctctggccagcgcacattca
ggttctctccctttccctaccttccccctcctcagtaaccccactcaggctgccgcaggc
ctcccaaccccggcccaatctcaggtatccattttaaactcttctattgcacgctctgtc
actgctcctgccttctctgtaaacagtccagccgtctcaacccctctgcctctccctgca
gccccggacgccccggctagctcaggggaggccggtgccacacagacctccaccacctct
cagtccataccaggcctcagctccctggaccccaagtttgaggagctgatcctccagttc
gaggcagagttcggggacagttcatcctcggccccagtgccctgccctcctcagatccag
cctcaggaccagtccccctcagcctcagcccagcccgtggtgatagagtctcagcccaac
attacctcaggacaagccaggaccgcgtcaccgtccagcaccgccacccagtcctgcagc
cctactcccttagcttctaccacagccccaccagcagaccaggacatggaggtggacaag
gagaatgttacaaggggtgtgagtgaagcatcctacacctccgccacaccgccctgcatt
gagagccccatggaggagcagcccgagggggcccagttgccactctcgctgcgccaagag
gtccatctggagcagcagcagcaccgcgtccttgaagaccccttcaccgtgcctctctcc
ccctctatgtccccgctgcccaaacgcatgaagatcgagacgaatgggaacgtggctgtc
ctctccaccactggatcattctctgaggggggcgaggacgacacccccactaaggacggc
ttccccctcaacccctccctaaaaggcttcctggagtcgccgctacgctacctggacacg
cccactaaaagcctgctagacatgcccgccaaggacctccaggctgagttccccacctgc
gactgtgtcgagcaaatcctagagaaggatgagggtccgtactacaatcacttgggctct
gggcccactgtggcctccatacgagacctgatggagaccaggtatggagagaagggagat
gctatccgtattgaaaaggtagtctacaccggccgggaaggcaagagctctcagggatgt
cccatcgccaagtgggtgattcgtcggggcagtgatacagagaagttgctgtgtctggtg
cgtccccgggcgggtcaccactgtcccaacgccttcatcatcatcctcatcatggcgtgg
gagggcgtgccccgggcgctaggcgacaagctctatcgagagctctccgccaccctcaca
cagttcggcaaccccactagccgccgctgtggactcaacgacgatcgtacgtgcgcgtgc
caaggcaaggaccccgacagctgtggagcttccttctccttcggctgttcctggagcatg
tacttcaacggctgcaagtacgcccgcagcaaaacaccacgcaagttcagactagcagga
gaccacccccaagaggaggatcaactcagggataacttccaggatctggccactgaggtg
gctcccctgtacaagcagctggccccacaggcctacagtaaccagtgtcagaatgagacg
aaagccacagactgcaggttgggtctgaaggaaggccggccgttctccggcgtcaccgcc
tgtatggacttctgtgcccatgcccacaaggaccagcacaacctctacaacggctgcact
gtggtgtgcacgctgactaaagaggacaaccgtacggtgggggagatcccagaggacgag
cagctccacgtacttcccctctacaaggccgccctcacagacgagttcggcagcgaggag
ggccagcgtcaaaagatgcgtacaggcgccattcaggtgctcaacaacttccgccgcgag
gtccgcaagctgcccgagcgcgccaagtcctgccgccagcgccgcctggacgctaagaac
cgtgcctccgagaagaagaagggcaagcagcagccgccaacgcccacagagacgccggag
aaacccgggatcaagatggaggtccggcacgctggctcccctgtcagacagaatggcaat
aaagccatccctaagcaggaggtgaagcccactataaagaaggagccagtggaccagcgc
ttccagcccttccatggtcagctggagggctaccctgcccaggctgccgacccctaccac
gtctacccctcccgccctggctactacgcacggggaggcctctcttccaatggccagccc
cttgccattccacctccaccaggccctgtcaatggctaccgccctaatctaccggcagca
ctgccctatagctactacacctacccccccaaccctagcacacttttcccccatgagctc
acttacgagggctgcaacggctcctggcaccacatggggcccaagttttcccccagtcct
gtggacaagaagccagacgttcagagcctccaggccaggctggctcactcctactcgagc
ccaggccaccttgagcagcagcagcacggagacccagccaaccaacaccaacgcagcgct
tacccacaccctcaccagcctgactacaaccaatcacgtccctcctcagcctcctcagag
ccctcccacagagggacccccgtcatcaagcaggagcccatggatatgccagtttataag
gaggtcaatgcccagagctgtcccagcatgcccagcaccacccttcagcctggcgctgct
ggagggccctggcatgggcacaagcccaacggcattagggtgcccagcagttgggaaggc
aacctccaaccaccaggccccccggaggctcccttcacttcagacaagcagcagtttcac
cagcagggacctcgccagactttccagtccccatacctccaagagcagcatcagcatccc
ccacaacagccctccccatactcccagcagtggaactcttaccatggcccaaacaccccc
actgcctcccctgctccctccccgtccccctccataaagatacccccgtccccctttccc
tcctcacaccccggcaccccccaccactgggacagccctgattccagccctcagcctaag
gcttggcccatgggcatggttcctgctggttatagccccagtcccgtcggaggcttcccc
gacaagatgtggtccaaggcgggcgagagttggggctcgacccccttggggctccaggag
aaggcctggaagtcttccggaggctctatggcaggtacaccgtccccggccccagaggga
cgcttgttccccgatgccctacagcagtcggatggacagtcccaggctgagactcctcgg
aacctcgaggaggaagagcggtggtcggacagcgagcataacttcttggaccccagcatc
ggaggggtggcggtggcgcccgcccacgggtccatcctgattgagtgcgcccggcgcgag
ctgcacgccaccacgccgctcaagaggcccgaccgctctcaccccacccgcatctcccta
gtgttctaccagcacaagaacatgaaccagccgtgccacggccagtggatctgggaggcc
aagatgaagatgctggcggagcgggctagagagaggcagcaggaggcagctctactgggg
ctgccctacgacgacatcaaacctgggaagaaacgcaaattgggggccacggcagcaggg
gccagcccggggcctggccagaccacagacaagagagaggggccggtgacacggctggcc
tccacgcgacacaccacctctaccatcactgtatccccctacgcctttaccaccctcacc
gggccctacagccactttgtgtga

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