Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139411076
Help
Entry
139411076 CDS
T10872
Name
(RefSeq) ninein-like protein isoform X1
KO
K16477
ninein-like protein
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ocla03036
]
139411076
Chromosome and associated proteins [BR:
ocla03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
139411076
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_7
EF-hand_6
EF-hand_1
EF-hand_8
DUF5580_M
EF-hand_5
Motif
Other DBs
NCBI-GeneID:
139411076
NCBI-ProteinID:
XP_071013019
LinkDB
All DBs
Position
1:complement(65856069..65899218)
Genome browser
AA seq
1803 aa
AA seq
DB search
MDEEEQNRYVAQLKEEFDSCDTTGTGYLDKEDLSSLCHKLSLDAHLPLLLDTLLGPHHYA
RVNFEEFKEGFVAVLSRSLDFSTSEEESSYLEPVVPEEVKPKFVKGTKRYGRRSRPDRPD
SELPAELEDSPPFRTEQKELSPSGVRRAKLRRSTSLESVESLKSDEETGSHKDTIHQTFE
AQGQQKRWKRDSSGSPLQSPGPGAEVSDSQMRAVWEELGVGGGGFLNRQELSLVCDHLGL
QDLNSEELDALFRKLDTDLDGKVSLRKFQKGLFREKGVPVPTSSTPIRPNPHRSLQQAFE
ERMGRSTSPSLLSATVGQRLLTRLDDGSGCTSPERVITLWNEEGIRNSRDILQTLDFPLE
EQVSLAELTLALDNELLVSGNGIHQAALISYKNEIQFLQVLADQACQERDKVKADLEWAD
RRNLQLVREVDDRHATIESLNETKIKGLEQEFRYRLTALRSESEQESEVLLQQVERERAK
LEEEVEVLHAQDASLQEEICNATQENHRLEEEGSVLKGKLSDAENTISKLQRDLDQLLLD
KFGSLDPNNTGLLNQEERVSEIIKEYELQCRELRDRNDELNSEVEMLKSQGMGRRPRRAK
DTSTHAWSSRRSLTTESDSDDPEMKIGVSPIASKKLQVASKNGLGCLESLPGPVVSIETE
MAMEQFKERHSQEVQDLKIELETKVNFYERSLELMRRNMEVERKDISSGFKVEISELEEQ
KAQAEEQVKRLREVVEKLQAELQSSSRGLRGPGWDADQERRAQREQAELEQNYAREISNL
VQRLTSEKDQLEAELKLKMDQELLLVREEAEQQVSQMKTQQGEAQRSFMHQLRCERLRLE
LEQERHRERLYSTERAVEEQARICSRSAVERKRLEEGHQEEVRQLKEHIASLQEQADLTS
DREKSLIQHCQLEVKLEHYQTQCSQLEAELEETCDRCSQLEAKLEVVCAQLELEERTVCL
ESEALTERLTSEQHDVEEELGLVRDREREILSEVSQLREELHSLRSEYMTLLQDKEIMAE
NCSSLSSTFLQQQAQLRAKEEDTDTLRGELERAREALRNEVERCSRQTAELDSQKTDRAK
LMEELRKHRTTVDCLQSDLDCVTEELNQWKRAEKSLQEALRLEQTQVMEIKSTLDLEREE
TGCLGQENAHYIRLADQLSNQIVEMEMESSKLQDHIHQLNAQLVEMSNLVSDLRTQLEAK
FTEVDHLESDIKQTAGLVEIAEALSNKHYREEELLNTQLETKERELCSLRGKAGSSTTVQ
LQQALLSSQAEVHRLEEDFESEKGRMKEQLVEMEKLVMALEMVMDPTSPHSSQLDEVNCE
NSALKDRLAMLQQDVQRMEEEIVKKKKKLDEVEQEHEKNREKQERLHKENAKYQEEVLDL
RAHNLQLSSRLRADQGAVQMLTERLAQVSREQEEGAATARQLQETSTQQERERLHLQAAW
RHDKELLERELHTIKEKLQCLSEVESSLTSLTLKHQWLEQDKERLLREVEERTQKVEKLQ
ESLLSVDSQVELLRSQLQAVDQEKNGQTQEVANHQRMIQDAQDKVKELEASMGRLSREKE
QLRLAQKQHEEEATMALQKECQSLRLQNQELLHRVYQLQGQDVEVQSLTEECLTLKNKQT
QLETARAEAQDQALMVDTALTLAQAQHVRELQQLREQAGLGSREQLAHFQAQLADEKRRG
KKLQQTLRTQAQQASTQIGLQQEQYEKVIGNMQEGMEGVETKLRSVRKMLQEKVNQLKEQ
LAKNAKSDIMLKDLYVENSQLMKALQVTEQRQKSAEKNNFVLEEKITALNKLLRKIAPAS
LSA
NT seq
5412 nt
NT seq
+upstream
nt +downstream
nt
atggatgaggaagagcagaaccgctatgtggcccagctgaaggaggagtttgacagctgt
gacaccacaggcactggttacctggacaaggaagacttgtcatctctttgtcacaagctg
tccctggatgctcaccttcccttactgttggacaccttgctaggaccacaccactatgct
cgggtgaattttgaggagttcaaagaaggctttgtagctgtgttatcacgctctctggac
ttcagcacctcagaagaggagagcagctacctggagccagttgttcctgaggaggtgaag
cccaagtttgtgaagggaaccaagcgctacggccggcggtctcgtcctgacaggcccgac
tctgagctcccagctgaattggaggactctcctcctttcaggacagagcagaaggagctc
tctccctctggcgtgaggagggccaaactccgacgctccacttctctggagagtgtggag
agtctcaagtcagatgaggaaaccggaagccataaggacaccatccatcaaacctttgag
gcacaagggcagcagaagcgatggaagcgggacagttcggggagcccactccaatcccct
gggccaggggccgaggtgtcagacagccagatgagggcagtatgggaggagcttggagta
ggaggaggaggctttctgaacagacaggaactctccctggtctgtgaccaccttggcctg
caggacctgaattcagaggagttggacgccctcttcaggaagttggacactgacctggat
gggaaggttagcctcaggaagttccagaagggtcttttcagagaaaaaggtgtcccagtt
cccacctcctccacccccatacgccccaacccccaccgctcactccagcaggcctttgag
gagcggatggggcgctccacctctccctctctcctgtctgccaccgtgggccagaggctg
ctgaccaggctggacgatgggtcgggctgcaccagtccagagagggtcatcaccctctgg
aatgaggagggaatccggaacagcagggacatcctacagactttggactttcccctggag
gagcaagtcagtctggcggagctcaccctggccctggacaatgagctgctggtcagcggc
aacggcatccaccaggccgctctcatctcttacaagaacgagatccagttcctccaggtc
cttgcagaccaggcgtgtcaggaaagggacaaggtcaaggccgacctggagtgggccgac
aggagaaacctccagctggtcagagaggtggatgacaggcacgccactattgagtcactg
aatgaaaccaaaatcaagggtctggagcaggagttccggtataggctaacggccctgcgc
agtgaatcggagcaggagagcgaggtcttgctgcaacaggtggagcgtgagcgggccaag
ctcgaagaggaagtggaggtcttacatgcacaggatgccagtctgcaggaggaaatctgt
aatgccacccaggagaaccaccgtttggaggaggagggcagtgttctgaaggggaagctg
tcagatgcagagaacaccatctccaagctgcagagagacctggaccagctcctactagac
aagtttgggagcctggatccgaacaatacaggactgctgaaccaggaggagcgtgtctct
gagatcatcaaggagtacgagctgcagtgccgggagctgcgggaccggaatgacgagttg
aactctgaggtggagatgttaaagagtcaggggatggggaggcgacccagacgggcaaaa
gacacgtccacacacgcgtggtccagccgacgatcactgaccactgagtctgactctgat
gaccctgagatgaaaataggtgtatctcccattgctagcaaaaagctacaagtggccagt
aagaatggcctgggttgtctggagagtctgccaggtccggttgtgagcattgagacagag
atggccatggaacagtttaaggagaggcacagccaggaggtgcaggacctgaagattgag
ttagagaccaaggtgaacttctacgagcgcagcctggagctgatgcgacggaacatggag
gtggagaggaaggacatctcttcgggcttcaaggtggagatcagtgagctggaggagcag
aaggcccaggctgaggagcaggttaagaggctaagggaggtagtggagaagctgcaggcc
gagttacagagcagctccaggggcctgagagggccaggctgggacgctgaccaggagaga
agggcccagcgcgaacaggctgagctggagcagaactatgcccgggagatcagtaacctg
gtccaaagactgacctctgagaaagaccagctagaggctgagctgaagctcaagatggac
caagagttgctgctcgtaagggaagaggcagagcagcaggtgtctcagatgaagactcag
caaggcgaggcccagcgcagcttcatgcaccagctacgctgtgagcgcctgcggctggaa
ctggagcaggagaggcacagggagagactctacagtacagagagggcggttgaggagcag
gccaggatctgcagccggtccgctgtggagaggaagaggctggaggaagggcaccaggag
gaagtccggcagctgaaagagcacatagccagtctgcaggagcaggcagatctgacctcc
gatagggagaagtcacttatacagcattgtcagttagaggtgaaactagagcactatcaa
acacagtgcagtcagttagaggctgaactggaagagacttgcgatcggtgcagtcaacta
gaggccaaactggaagtggtttgtgcccagctggagctggaggaacgcactgtgtgtctg
gagtctgaggctttgaccgagcgtctgacctctgaacagcatgatgtagaggaggaactg
gggttggtgagggatagagagcgagagatccttagtgaggtgtctcagctaagagaggag
ctgcatagtctacgatctgaatatatgacacttcttcaggacaaggaaattatggcggag
aactgtagcagtttgtccagcaccttcctacaacagcaagctcagctgagggccaaagag
gaagacacggataccctgaggggggagttggagagggcacgggaggctctgagaaatgaa
gttgaacgatgctcaaggcagactgctgagctggactcccagaagacggacagagcgaag
ctgatggaggagctgagaaaacacagaacaactgttgactgtctacagtcagatcttgac
tgtgtcactgaggagttaaaccagtggaagagggcagagaagagtctacaggaagcattg
aggctggaacaaacccaggtcatggagatcaaatccaccctggacctggaaagggaagag
acgggctgtctgggccaggagaacgcccactacatccgcctggcagaccaactctccaac
cagatcgtagaaatggaaatggaatcatccaaactccaagaccacatccaccagctgaat
gcccaactggttgaaatgtccaacctagtttctgatctcaggacccagctagaggccaaa
ttcacagaagtagaccaccttgaatcagatataaagcagactgcaggtctggtagagata
gcggaagccctgtccaataagcactatagggaagaggagctgctgaacacccagctggag
accaaggagagagagctgtgctccctcagaggaaaggctggcagcagcaccacagtccag
ctgcagcaggccctgctgtcctctcaggcagaggtccacaggttggaggaggactttgag
tcggagaagggcaggatgaaggagcagctggtggagatggagaagctggtcatggctctg
gagatggtgatggatcctaccagtccacacagttctcagttagatgaggtcaactgtgag
aacagtgctctgaaggacagactggccatgttacagcaggatgtccagagaatggaggaa
gagatcgtcaagaagaaaaagaaactggacgaagtggagcaggaacacgagaagaacagg
gagaagcaggagagacttcacaaagagaacgccaagtaccaggaagaggtgctggacctg
agagcccacaacctgcagctgagctcccgtctccgtgccgaccagggggcggtccagatg
ctgacggagaggctggcgcaggtgtcccgggagcaggaggagggggcggccacagccagg
cagctccaggagacctccacccagcaggagagggagagactccacctgcaggcagcctgg
cggcacgacaaggagctgctggagagagaactccacaccatcaaggaaaagctccagtgt
ttatcagaggtggagtcctcactgaccagcctgaccctgaagcaccaatggctggagcag
gataaggagaggctgctgagggaggtggaggagaggacccagaaggttgagaagctccaa
gagtctcttctctctgtggactcccaggtggagctgcttcgctcccagctccaggcagtg
gatcaggagaagaatggccagacccaggaagtagccaaccaccagaggatgatacaggat
gcccaggacaaggtaaaggagctggaggccagcatgggcaggctaagcagggagaaggag
cagctgcgtctggcccagaaacaacatgaggaggaggccactatggccctacaaaaggag
tgccagagcctgcgcctccaaaaccaggagctgctccacagggtgtatcagctgcagggc
caggatgtggaggttcagagtctgaccgaggagtgcctgactctaaagaacaaacagaca
cagctggagactgccagggcagaggcacaggatcaggcactgatggtggacacagccttg
acactagcccaggcccagcatgtccgggagctgcagcagttgagggagcaggcaggcctg
ggttccagggagcagctggcacactttcaagcccagctggcagatgagaagcgcaggggg
aagaagctgcagcagaccctccgcacacaggcccagcaagccagcacccagataggcctg
cagcaggagcaatatgagaaggtgatagggaacatgcaggaggggatggagggggtggag
accaagctgaggagtgtgcgcaagatgctacaggagaaggtcaaccagctgaaggagcag
ctggcgaagaatgccaagtcagacatcatgctgaaggacctgtatgtggagaactcccag
ctgatgaaggcactgcaggtcactgagcagcgacagaagagtgcagagaaaaataacttt
gtcttagaggagaagattacagccctcaacaagctccttcgtaagatcgcccctgcctcc
ctctctgcgtag
DBGET
integrated database retrieval system
