Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139411079
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Entry
139411079 CDS
T10872
Name
(RefSeq) low molecular weight neuronal intermediate filament-like
KO
K04572
neurofilament light polypeptide
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ocla01009
]
139411079
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ocla04812
]
139411079
Protein phosphatases and associated proteins [BR:
ocla01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
139411079
Cytoskeleton proteins [BR:
ocla04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type IV
139411079
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Filament
Filament_head
Fib_alpha
BCDHK_Adom3
Motif
Other DBs
NCBI-GeneID:
139411079
NCBI-ProteinID:
XP_071013018
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All DBs
Position
6:36837096..36843627
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AA seq
516 aa
AA seq
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MSYSGDVYSSSSYRKIFGDAPRSSGRMSVGSSPSRLSGGYRSSGSHRNYGSPSMVTSSGY
RKAGAGRNFHSSMPDSMDLTQSTAVTNEMKIIRTNEKEQLQGLNDRFVSFIEKVHNLEQQ
NKVLEAEVTLLRQRHTEPSRLHDLYEQEIRELRARVEELTHEKSQMHLDCVQMNEMLDRV
KEKLDEETRLREEAEGTLKSYRKDVDDATMSRLELEKKVESLLDEIAFLRKVHEEEQQEL
QASLQATQVSVEMDMRDDKPDLAVALKDIRAQYEVLSAKNQNQAEEWYRSKFASVNEAAS
RNQDQAKHSREELNEYRRQVQARSLEIEALRGHNEALERQMAELEDRHSNEMGEMQETIQ
ELESALRSTKGEMSRHLREYQDLLNVKMALDIEIAAYRKLLEGEECRLSTVGGNILQSGY
SGFSYSSSRSYALGSSAPYRMRRARPEEPEKEEDEEEKEEEENEEEGEEGGDGEENGDEN
AVENGEGDEEEDEEEEDDVQKKKEEKGGAPSKSTKS
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgagttactccggcgacgtctactccagcagttcctatcggaagatcttcggggatgcg
ccccggagctccggccgcatgtcggtgggcagcagcccctctcgcctgtccggcggatac
cgctccagcggctcacaccgcaactatggctccccatccatggtcacatcctccggctac
cgcaaggcgggtgccgggcgcaacttccactcctccatgcccgactccatggacttgacc
cagtccacggccgtcaccaacgagatgaaaatcatccgcaccaacgagaaggagcagctc
cagggcttgaacgaccgcttcgtctccttcattgagaaggtccacaacctggagcaacag
aacaaggttctggaagccgaggtgactctactgcgccagcgccacacagagccctcccgt
ctgcacgacttgtacgagcaggagatccgggagttgagggcgcgggtcgaggagctgacg
cacgaaaagagccagatgcacctagactgcgtgcagatgaacgagatgctggaccgcgtg
aaggagaagctggacgaggagacgaggctccgcgaggaggcggagggcaccttgaagagc
taccgtaaggacgtggatgacgccacgatgtcccgactcgagctggagaagaaagtcgag
tcactgctggatgagatcgccttcctcaggaaagtgcacgaagaggagcagcaagagctg
caggcttccctgcaagccacacaggtttcagtggagatggacatgagggatgataaaccc
gacctggccgtggccctgaaggacatccgtgcccagtacgaggtcctgtcagccaagaat
cagaaccaggccgaggagtggtaccgctctaagtttgccagtgtgaacgaggcggcctcc
cgcaaccaggaccaggcgaagcatagcagggaggagctaaatgagtatcgcaggcaggtg
caggcccgcagcctggagatcgaggctctcaggggccacaacgaggccctggagaggcag
atggctgagctggaggaccgccatagcaacgagatgggagagatgcaggagaccatccag
gagcttgagtctgccctccgcagcaccaagggggagatgtcccgtcacttgcgtgagtac
caggacctgttgaatgtcaagatggccctggacattgagatcgctgcttacaggaagctg
ctggaaggtgaagagtgccgtctgagtacagttggcggaaatatcttgcagtcaggttac
tctggcttctcctattcgtccagccgctcctacgccctgggttcctccgccccttacagg
atgaggagagccaggcctgaggaaccagagaaggaggaggatgaggaagagaaggaggaa
gaggagaatgaggaggaaggagaggagggaggggatggagaggagaatggagatgagaat
gcggtggagaatggagagggagatgaggaggaagatgaggaagaggaggatgacgttcag
aagaagaaggaagagaaggggggtgctcccagcaagagcaccaagagctaa
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