Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139411129
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Entry
139411129 CDS
T10872
Name
(RefSeq) A disintegrin and metalloproteinase with thrombospondin motifs 12-like
KO
K08626
a disintegrin and metalloproteinase with thrombospondin motifs 12 [EC:3.4.24.-]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ocla01002
]
139411129
Peptidases and inhibitors [BR:
ocla01002
]
Metallo peptidases
Family M12: astacin/adamalysin family
139411129
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Gene cluster
GFIT
Motif
Pfam:
TSP1_ADAMTS
TSP_1
ADAMTS_spacer1
Reprolysin
ADAMTS_CR_2
Pep_M12B_propep
Reprolysin_5
ADAMTS_CR_3
TSP1_CCN
Adt-1
Reprolysin_3
Reprolysin_2
TSP1_spondin
Reprolysin_4
Motif
Other DBs
NCBI-GeneID:
139411129
NCBI-ProteinID:
XP_071013104
LinkDB
All DBs
Position
6:complement(39951432..39999860)
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AA seq
1641 aa
AA seq
DB search
MRCPRVSRVLFLLHSVLFLAASHVEFSLPGSLSPDEEQGRFLQSQSDVSMVHPVKVDSDG
QFLSHSLAHRFERVRHKRDLGPLEGRVYYKVTYKGRNLFFNLTVNNYLVSNKYVLEWRNG
SLNRTEHHTTGENACHLIGTVTDPTNARGTAAISTCEGLKGLFTLPEGPHFIQPVQGSTD
GAVEREGPGLHVVYPSVTTAPHRYRRSSEARDTHSPCGVRDAPGDSLVVEREREDWEREQ
QEEEREREEETAQHRSQRSISRDRWVETMVVADTKLIDYHGSDNVESYIFTIMNMVAGIF
HDASIGNAIHITLVRLILLQGEEKGLKIIHHADTSLASFCAWQKKLNPLSDTHPAHHDVA
VLVTRKDICAGLNEPCETLGLSHLSGMCQPHRSCNINEDSGLPVAFTVAHELGHSFGIHH
DGQGNDCELDGRHPFIMSRQLMYDTSPLTWSSCSKDYITRFLDRGWGFCLDDRPSKKDLT
TPLARLGVRYTTQHQCQLQYGPNATYCHEIDNVCQILWCSVNGSCRSKLDSPIDGTSCGP
EKWCISGECVIIGKLPETVNGNWGQWSSWSHCSRTCGAGVQSAHRECNHPKPEFGGKYCT
GERRRYHICNTKPCQKAKPTFREMLCSEFDTVPYQNELYEWVPVASLSSPCELHCRPVDE
HFSEKMLDAVTDGTPCFMNNNSRSLCVNGVCKEVGCDYGIDSNAVEDRCGVCLGDGSSCE
TVQMTFDGGDSFGYVDVGVIPEGARDIVVQEMEEAGNFLALRGQGSEEYFLNGEYIIQWN
GEYKAGGTTFYYERSGNLENLTSPGPTKQPVMIQLLYQEKNPGIKYEYTIKRNRQTGNEV
IKSEYRWRHGAWTDCSTTCGLGEQQQPVRCFELEVGVVDEAFCDQESRPEDRHRKCKNMD
CPARWWVGGWQLCSATCGSGGVRKRTVLCVRTVAGEERVLHPGDCKQLLKPKPVVPCNRD
QLCGPDWAAGNWSMCPVTCGGSVRTRTVTCLTAPPKKCDIKTIPRSKSLCALQSCPSAGL
RRRPGPPPKYRRFYLPKRHPTRQPVTHTWGPKSTSNATPGTSTVTVTERTATPITTSTTK
PLPRSSTATDIIDVDDHVVKNGRVEDKDGAFITTSPTDTENRERDMREKEEEDEKKEEGS
AADFVFPDVGITYTPGYDYVVEDVTAEEEGLTDLDIFTTESSLRTPIQSPPTATTVRLHP
TSTPHIPHTSVPTTSRTTQHTTRVPLTTSPSTPQTSTAHWAMNTSHYTLTPPNTTPSINP
FTKQTTRVPHTTPIPRAHTAEMRSTLIAPYDTTQGLYPNTEGIFHTSDAPYFSSPTPESP
GPTVRIIKWKKPIKTPKSGSADPRSKKPGPHSKGKGQEQRPGSPVVTFASDYGYLNAQEP
ISMEVFWLVGNWSECSTSCGLGAVWRPVMCSSQQESDCANLKRPEPARTCHLRPCATWLS
GDWSKCPKGCEVAGRRQREVQCVDEQKGRPLRPFHCQVLSSRPPSTLSCRLQPCQPWRTS
PWGQCSRSCSGGLRERLVYCPEPQRCTATQRPNDTETCNLQPCSYWDPQDWEECSVSCGE
GLQHRVVRCVVEDSDSVEDSLCEPSSRPDTLRKCHMQECQTNTGPLCRKNSMSSRFCDKL
KLLGRCSLRSIQKQCCITCRG
NT seq
4926 nt
NT seq
+upstream
nt +downstream
nt
atgcgatgtccgcgtgtgagccgggttctttttctgctacattctgttttgtttttggct
gccagccatgtcgagttctcgctgcctggtagcctctctccagacgaagaacaaggtcgc
tttctccagtcccagtcggatgtgtccatggttcatccagtcaaagttgacagcgatgga
cagtttctctcccactctctagcacaccgctttgagcgcgtgcggcacaagcgagacttg
gggcctttggagggacgcgtttattataaggtgacctacaaaggtcgcaatttgtttttt
aatctaacagtcaacaactatttggtgtcgaacaaatatgttctggagtggcggaacgga
agtctgaaccggactgagcaccataccacaggggagaatgcgtgccacctgatcggcacc
gtgactgatcctactaatgcgcgcgggacagccgccatcagcacctgtgaaggtttgaaa
ggactctttaccttgcctgaaggaccccacttcattcaaccagtccaggggtccactgat
ggtgctgtcgaaagggagggaccagggctccatgtggtctatcccagcgtaaccacggca
ccacacagataccgacgcagctctgaggcccgggacacacacagcccctgtggggtcaga
gacgcaccaggtgattccctagtggtggagagggaaagagaggactgggagagggaacag
caggaagaagagagggagagagaggaggagacggctcaacatcgctcccaacgctccatc
agcagagataggtgggtagagaccatggtggtggcagacaccaaactgatcgactaccac
ggcagtgacaacgttgagtcttacatcttcaccatcatgaacatggtggcagggatattc
catgatgccagtataggaaatgccatccacatcaccttggtccgcctgatcctcctgcag
ggcgaggagaaagggctgaagatcatccaccatgcagacacctctctggccagtttctgt
gcctggcagaagaaactcaacccactaagtgacacacaccctgctcaccacgacgtggca
gtgctggtcaccaggaaggacatctgtgcagggctcaacgagccgtgtgagacccttggt
ctgtcccatctgtcagggatgtgccagcctcaccgtagctgcaacatcaacgaagactca
ggactacctgtagccttcaccgttgcacacgagctgggacacagctttgggatccaccat
gatggtcaggggaatgactgtgagctggacggcagacaccccttcatcatgtccagacag
ctaatgtacgacacctccccacttacctggtcctcctgctccaaagactacatcacacgc
ttcctagatcgtggttggggcttctgtctggacgaccgtccctcaaagaaggatctgacc
accccactggcccgtctgggggtccgctacaccacacagcaccagtgtcaactacagtac
ggccccaatgccacctactgccacgaaatcgacaatgtgtgccagatcctgtggtgttca
gtgaatgggtcctgccgttctaaactggactcccccatagatggcactagctgtggccct
gagaagtggtgtatctcaggggagtgtgttatcatagggaagctaccggagacagtgaat
gggaactggggacagtggagtagctggtctcactgctccaggacctgtggggccggggtg
cagtctgctcacagggagtgtaaccaccccaaaccagagtttggtgggaagtactgtaca
ggcgagagaaggcgttaccatatctgtaacaccaaaccatgccaaaaggccaaacccacc
ttcagagaaatgctgtgtagtgaatttgacacagtgccctaccagaacgaactctacgag
tgggtccctgtggccagcctatcgagtccgtgtgagctgcattgtcgtcctgtggatgag
catttctctgagaagatgctggatgctgtgacagatggaactccctgcttcatgaacaac
aactccagaagcctctgtgtcaacggagtgtgcaaggaggtgggctgtgactatggtata
gactctaacgctgtagaggatcgttgtggagtgtgtctgggcgatggttcctcctgtgag
actgtccagatgacctttgatgggggggatagcttcggctacgtggacgtgggagtgatc
ccagagggggcacgtgacattgtggtccaggaaatggaggaggcggggaactttctggct
ctgcggggtcaggggtcagaggagtatttcctgaatggcgagtacatcatccaatggaat
ggagagtacaaggcaggcggaactaccttctactacgaacgcagcggaaacctggagaac
cttacctcccctggacccaccaaacaaccagtcatgatccagttgctgtaccaggaaaag
aatccaggtataaagtatgagtacaccatcaagaggaaccgccagacaggaaatgaggtc
atcaagtcggagtacaggtggaggcatggggcctggacagactgcagcaccacctgtggg
ctaggtgagcagcagcagcctgtcaggtgttttgagttggaggtgggcgtggtcgatgag
gctttttgtgaccaagagagccgcccggaggaccgacaccgcaagtgcaagaacatggac
tgccccgccaggtggtgggtggggggctggcagctgtgctctgccacttgtggttcggga
ggggtgaggaagcgcactgtactgtgtgtgcgcacggtggccggggaggagagggtgctc
caccctggggactgtaaacagctgctcaaacccaaacctgtagttccctgcaacagagac
cagctctgtggacccgactgggccgcgggcaactggagcatgtgcccagtgacatgtggt
ggtagtgtgcgcacccggacggtcacctgcctgaccgcacccccaaaaaagtgtgacatc
aaaaccattcctcgctccaagtcgctgtgtgccctgcagagctgcccaagcgcaggcctc
cgacggcgcccgggaccaccccctaaataccgacgtttctacctgcccaagagacaccca
accaggcagccagttacacacacctggggccccaaaagcaccagcaacgctacacccggg
accagcactgttacagtgactgagagaactgcaacccccatcaccacctctaccaccaag
cccctcccacggtcctccacagccactgatatcattgacgtcgatgaccatgtggtgaag
aatgggcgtgtggaggacaaggacggggcatttattacgaccagtcctactgacacggag
aacagggagagggacatgagagagaaagaagaggaggatgagaaaaaggaggaggggagt
gcagctgattttgtgtttccagatgtggggattacgtacaccccggggtatgactatgta
gtggaggatgtgactgcagaagaggaggggcttacagatctagacatttttaccacggaa
tcctctctcaggacccccatccaatcaccgcccaccgcgaccaccgtcaggttacaccct
acatccacaccacacataccacacacaagtgtcccaacaacatcacgtacaacccaacac
acaaccagagtacccctcactacctccccctcaaccccacaaaccagcactgcgcactgg
gctatgaacaccagccactacaccctcactccccccaacaccaccccttctatcaaccct
ttcaccaaacagacaaccagggtgccccacaccacccctataccccgggcacacacagcg
gagatgaggagtacacttatagcaccttacgacactacacaaggactgtatcccaataca
gaaggcattttccacactagcgatgccccgtacttcagcagcccaaccccagagtccccc
ggccccactgtgaggatcattaaatggaagaagcccattaagacccccaagagtggcagc
gctgatccccgttctaaaaagccaggcccacattcaaagggcaaaggtcaggagcagaga
ccaggaagtcccgtagtgaccttcgccagtgattatggctacctgaacgcccaagagcca
atcagcatggaggtgttctggttggtgggtaattggagcgagtgctcaacgtcgtgtggc
ctgggggcagtgtggaggccagtgatgtgtagctcccagcaggaatcggactgtgccaac
ctgaagagaccagaaccagctcgcacctgccacctgcgcccctgtgccacctggctgagt
ggcgactggagcaagtgtccgaaggggtgtgaggtggcggggaggaggcagcgtgaggtg
cagtgtgtggacgagcagaaggggcgtccactgagaccgttccactgccaagtcctgtcc
tccaggccgcccagcacactgtcctgtcgtctccaaccctgccagccctggagaacctcc
ccctggggacagtgctcacgtagctgtagtggtggattgagggagcggctggtatactgc
cctgagccgcagcgctgtaccgccacccagaggccaaacgacacagagacctgcaacctg
cagccctgcagctactgggacccacaggactgggaggagtgctctgtgagttgtggtgag
gggttgcagcatcgtgtggtgcggtgtgttgttgaggactccgactctgtggaggacagt
ctgtgtgagccgagcagcaggcctgacacactcaggaaatgccacatgcaggagtgtcaa
actaacaccggtccgctgtgtaggaagaacagcatgtcgtctcggttctgtgacaagctg
aagctgctgggccgatgctccctcaggtccatccagaaacagtgctgtatcacctgtaga
gggtaa
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