Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139411178
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Entry
139411178 CDS
T10872
Name
(RefSeq) calmodulin-regulated spectrin-associated protein 1-B isoform X1
KO
K17493
calmodulin-regulated spectrin-associated protein
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ocla01009
]
139411178
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ocla04812
]
139411178
Protein phosphatases and associated proteins [BR:
ocla01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
139411178
Cytoskeleton proteins [BR:
ocla04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
139411178
Intermediate filaments
Intermediate filament-binding proteins
139411178
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAMSAP_CKK
CAMSAP_CH
CAMSAP_CC1
CH
Motif
Other DBs
NCBI-GeneID:
139411178
NCBI-ProteinID:
XP_071013195
LinkDB
All DBs
Position
6:42626022..42663976
Genome browser
AA seq
1582 aa
AA seq
DB search
MDVELCAGGHNTRRKMDSAGEGTVEVVPLELYDSARAKIDANLRWLFAKAYGIDHIPEDL
RDPFYTDQYEQEHIKPPVLHLLLSCELYCRVCALILKTDQAASLQSHLSVIQALSRKGIY
VMESDDTPVTEADLACVPIKMSAHMPMVDALMMAYTVEMISIEKVVACVKRFSTFSASKE
LPFDLEDAMVFWINKVNLKMREITERELKVKHHPLESPNHQKVRYRREHTSGRQLPFFPL
LEDLMRDVCDGAALLTVVHYYCPNLMKLDDICLKEVTSIADSLYNIQLLKEFANEYLNKS
FYLTIEDMLYSPLVLKHNVMVFIAEFFWWFETVKPEFVQPRTEEFKDARAMAQPKSARPS
VPISNATKRSFQVTPGITEASLSVSAQSSPDVSNRYFLHPAEDSDPLTKGGPAAAFSTSH
PLLPLRQRQQKQQQGEDGSGIRNRSNSLENRQPRGSVQAWPDKRQRPMSTLNPYTFGISA
TDSDADIASGDSVSLARSISKDSLASNVANLTPKHQGLTPQGHTLIGPAQVSRAPVSPAP
RRVNGHGLLGNVNMEEEEQQLVSVMRTEASTALPEATQPTAGARPKDSFYLEPLMPAVLK
SAKEKSVCLNKEEESGEVGRSWGAGSIRRVEGVPGLAASARRKIPTSLNRTSTPTSSGEF
AVSAEASLAGQPQGQGACKNLVTSSVDPSSREPPGGFYLHSDSDNQNPGQDLEPDLDEAD
EEDLDEALTTKDPTMPRKAFDEEEESAKLQEDLKEKEDKDKGDDGGSGRSSPCLSTHSQA
SSLASGSIRMTSFAERKAQQRFGSNHDLRPSASSSQRTTPDGSECSGPLSLPTSWRLKRD
QSPSSPQGGRGDGGTNLLASELVQLHMQLEEKRKAIEHQKKKMEVLSARHRQKLGKAAFL
HIVKKGKSDTLPHPLKPDYNSKEELNGDKGGSSKDDSCLDALRGAKESESATSPVPDALE
MVERKCSGSTGLLLDEELDLNECNRSIEMLNDAIGSIQQQMMQLSLQQDLLMKQNVQSPP
GPPPPNDKTSGSEPKAQSAAHFVEMGSGAPTTGTAPTRKPPKLTSARGPRSKPSELKLVK
EHGRQGLTSSRAITPTHSLETLTHLRQFPGGRSPRADPPDTRTPSVGGETIGVQDKPGRS
ATFRLNDEANLRTMARIDPVNVTPEVSFECLSSTLREGELNSSDSSGKENVPLEEVSWSK
APLIEVDLSDLKDPEEMEGDCGQNSTMDGEDGEQKSGLGFFFKDEQKAEDELAKKRAAFL
VRQQKKAEDARLRKLQLEAETEQKREESRRKAEEDRMRKEEEKARRELIKEQYLRRKQQE
LMEEQGLGSPAKPKTPKTKPKKPSHQTHRPKSAFSREESSSDTFSSKCSSSTPDNLSSAQ
SGSSLSLASAATTEADSVNSGGAGSQRGESESFPGLSRNASRNTERDWDNGSTASSINSM
AEYTGPKLFKEPSSKSNKPIIFNAISHCCLAGKVNEPQKNTLLEELEKVEAHHLMILFRD
GGCQFRGVYSFFPDTEEILKLTGTGPKSISKKMIDKLYKYSSDRKQFTVIPAKTVSVSID
AITIHNHLWQAKRTTVPKKSGK
NT seq
4749 nt
NT seq
+upstream
nt +downstream
nt
atggatgtggaattgtgtgctggcgggcacaacacccgaagaaagatggattcagctggc
gaagggacagtggaggttgtacctttggaattgtacgactctgccagagcaaaaatagac
gccaacctacggtggctgttcgccaaagcctatggcattgaccacatcccagaggacctg
cgggacccattctacacagaccagtatgagcaagagcacatcaagccccccgtcctccac
ctactgctgtcctgtgagctctactgccgtgtgtgtgccctcatcctaaagacggaccag
gccgcctcgctgcagtcacacctgtcagttatccaggccctgagccgtaaagggatctat
gtcatggagagtgatgacacgccagtcacagaggccgacctcgcctgtgtgcccatcaaa
atgagtgcccacatgccgatggttgatgccctgatgatggcctacacggtggagatgatc
agcatagagaaggtggtggcctgcgttaaacgcttctccaccttcagcgcctccaaggag
ctgccctttgacctggaggacgccatggtattctggatcaacaaggtgaacctgaagatg
agggagatcacagagagagagcttaaagtcaagcatcacccgctggagtctcccaatcac
cagaaggtacggtaccgcagggagcacacgtcagggcgccagttgcccttcttcccccta
ctggaggacctgatgagggatgtgtgtgatggagctgcgctcctcaccgtggtccactac
tactgccccaacctcatgaagcttgacgatatatgcctgaaggaggtgacctccatagct
gacagtctgtataacatccagctgctcaaggagtttgccaacgagtatctcaacaagagc
ttttacctaacaatagaagatatgctctactctccactggtgctcaagcacaatgtgatg
gtgttcattgcggagttcttctggtggtttgagacggtcaagccagagtttgtccaaccc
aggactgaggagttcaaagatgctcgagccatggctcagccgaagagtgcccgcccctca
gtgcccatctccaacgccaccaagcgtagcttccaggtgacccctggcatcaccgaggcc
tctctgtctgtctctgcccagagcagccctgatgtctccaacaggtacttcctgcaccct
gctgaagactctgaccctcttactaaaggaggtcctgctgcagccttcagcacctcccac
ccactcctccctctgaggcagagacaacagaagcagcaacagggagaggatggatcagga
attagaaaccgttccaactccttggagaacagacagccacgaggttcagtgcaggcctgg
cctgacaagagacagaggccaatgtcaacgctcaacccgtacacgtttggtatctctgcc
actgacagcgacgctgatatagcctctggggacagtgtgagtctggcccgctccatcagt
aaagacagcttggcctctaacgtagccaacctcacccccaaacaccagggtctcacccca
cagggccacaccctgatcggacccgcccaggtaagccgcgccccagtcagccctgcaccc
cgccgagtcaacggccacggcctgctgggaaacgtcaacatggaggaggaggagcagcag
cttgtgtcggtgatgaggactgaagcgtcaacagctctccccgaggcgacgcagccaact
gctggggccaggcccaaggatagcttttacttagaaccactgatgcctgctgtgttgaaa
tcggcaaaagagaagtctgtatgcctgaataaggaggaggagagtggagaggtggggcga
tcgtggggagcggggtccatccggagagtagagggggtgcctggactcgcggcgtcggcc
aggagaaaaatccccaccagcctaaatcggacctctactcccacttctagtggtgagttt
gccgtgtctgctgaagcttcattggctgggcaaccccagggacaaggagcctgtaaaaac
ctggtcaccagtagtgtggacccctcctccagagagccacctgggggcttctacctccac
tctgacagtgacaaccagaatcctggtcaggacctggagccagacctggacgaggctgat
gaggaggacctggatgaagctctcaccaccaaggacccaaccatgcctaggaaggccttc
gatgaggaggaagagtcagccaagctgcaggaggacctgaaggagaaagaggacaaggat
aaaggggatgatggtggtagtggacgctccagcccctgtctcagcacccactcccaggcc
agcagcctggccagcggcagcatacgcatgaccagcttcgctgaacgcaaggcccagcag
cgctttggcagcaaccatgacttgcgacccagcgcatccagctcccaaaggaccacccca
gacggctccgagtgcagcgggcccctgtctctgcccacctcctggaggctgaagagggac
cagagcccctcctcgccccagggagggcggggggacggtggcaccaacttgttggcttct
gagctggtccagctccacatgcagctggaggagaagagaaaggccatcgagcaccagaag
aagaagatggaggtgctgtcagccagacatagacagaagctgggcaaggctgcctttctg
cacatcgtcaagaagggcaagagcgacaccctgccccacccgctcaaaccagactacaac
tccaaagaggagctcaacggggacaaaggggggagctcgaaagatgactcgtgcctggat
gcactgagaggggccaaagagtcagagtctgccacctcgcctgtcccagatgccttagag
atggtggaaaggaagtgcagcggtagcaccggtctgctgctggacgaagaactggacctg
aacgaatgtaaccgctccattgagatgctgaatgatgccatcggcagcatccagcagcag
atgatgcagctgtcccttcagcaggacctgctgatgaaacagaatgtacagtcccctccc
ggcccccctcctcccaacgacaagaccagcggctctgaaccaaaagcccaatctgccgcc
cactttgtggagatgggcagcggcgcaccaaccaccggtaccgcaccaaccaggaaaccc
cccaaactgacctcggccagaggcccaaggtccaagccgtctgagctgaagctggtcaag
gagcacgggaggcagggccttacctccagcagggcaatcacccccacccacagcctggag
accctaacccacttgaggcagttccccgggggcaggtcccccagggcagacccccctgac
accagaaccccctctgttggtggagagacaattggtgtgcaggacaagcctggacggagc
gccacctttaggctcaacgatgaggctaacctgcgcacaatggcccgtatcgacccggta
aatgtcaccccagaagtgtcctttgagtgcctgtccagtaccttgagggagggggagctg
aattcctcggacagctctgggaaagagaacgtccccttggaggaggtgtcatggagcaaa
gctcccctgatagaggtggacctgtcagacctgaaggacccagaggagatggagggagac
tgtggtcaaaacagcaccatggatggggaagacggagaacagaagtctggcctgggattc
ttcttcaaggatgaacagaaggcggaggatgagctggctaagaagagggcagcttttctc
gtaaggcagcagaagaaggccgaggatgcccggttacgcaaactacagctggaggcagag
actgaacagaagcgggaagagtccaggcggaaggcggaggaggaccggatgaggaaggag
gaggagaaggcccgtagggagctgatcaaggagcagtacctgaggaggaagcagcaggag
ctgatggaggagcagggccttggcagcccagccaagcccaagacccccaagaccaagcct
aagaaacccagtcaccagactcacagacccaagtctgcgttcagcagagaggagtcatcc
agcgacaccttctcttccaagtgctcttcatctacacctgacaacctgagcagtgcccag
tcaggctccagtttgtccctggcctccgctgccaccactgaggcagacagcgttaactct
ggaggagcaggatcccagcgtggtgagtctgagtctttcccaggcctgagtcgaaacgcc
agtcgaaacactgagagagactgggacaacggctccactgcatcttcaatcaactccatg
gcagaatacactggtcccaagctgttcaaggagcccagttccaagtccaataagcccatc
atcttcaacgctatctctcactgctgcctggctggcaaggtcaatgaaccccagaagaac
accctcctagaggagctggagaaggttgaggcccaccacctgatgatcctgttcagggac
gggggctgccagttccggggagtctactccttcttcccagacacggaggagatcctcaag
ctgactggcacgggcccaaagagcatcagcaagaagatgattgacaagctctacaagtac
agctcggaccgcaagcagttcaccgtcatccccgccaagactgtgtcggtcagcatagac
gccatcaccatccacaaccacctgtggcaggccaagagaaccactgtgccaaagaagagc
gggaaataa
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integrated database retrieval system
