Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139411211
Help
Entry
139411211 CDS
T10872
Name
(RefSeq) amyloid-beta A4 precursor protein-binding family A member 1-like
KO
K04531
amyloid beta A4 precursor protein-binding family A member 1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139411211
Membrane trafficking [BR:
ocla04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
139411211
Endocytosis
Clathrin-mediated endocytosis
LDLR adaptor proteins
139411211
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PID
PDZ
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
139411211
NCBI-ProteinID:
XP_071013296
LinkDB
All DBs
Position
6:complement(46146950..46248170)
Genome browser
AA seq
1028 aa
AA seq
DB search
MNPEEVEHGQELIEHVEADLPPPQRRRHDNHIATNNGRPRQPSNHSSENNNHPAPRYRRY
NEAPGTGGSRVRGAPQRRSTEEPEAELHLGAQSPPQPQQQQQAQGQSQPILRPAVTRYRR
QGDSEARLRAQQQRHIQRQQREAERVHQQQQQPLPAPQPVHSLPPEREEPEEDEEERGRY
RERETEGDNSALGRSASTESAFHTHTDRAEGDCVMALDLEAEDEGGTYEVMLRPEAEGYT
ESAESEQHHPHPQPNLNLNYPPQPPPLPREPLPDVGRPHSQEEAEETLNPGGGYSNYVYT
QPPNLHGGGARVPGERDSSVEERMEPKNEAYSEAYHYSLTEHVYEEISDAPSAAAAEGPT
PTNANENLQQRKAAFRLFEGGDGGGDYWQQEAVGSRLHHYDERSDGESDSPEKEAEFAPY
PRADSCDQDGEEDINMIVTEVRESSSSQSLERAAAGLGEGGDKEDMMKGGEEEGDSYNSQ
SDTPTDSKHPKGEMEREGDEKEGEGVPAPADSPSEDSSGVRNSREKRDAITLAIKDIKEA
IEEVKTRTVRSPYTPDEPKEPIWVMRQDLSPTAECCDLQPSLGGDSPGSDSQASPQGAES
SIRTPMLEGSESFESPPLSTKESRRSLASFPTYVEVPGPCDPEDLIDGIIFAANYLGSTQ
LLSDKTPSKNVRMMQAQEAVSRIKTAQKLAKNKKKAPEGEAQPMTEVDLFISTQRIKVLN
ADSQETMMDHPLRTISYIADIGNIVVLMARRRMPRPDSMDSVEASDPAEDEKQRQYKMIC
HVFESEDAQLIAQSIGQAFSVAYQEFLRANGINPEDLSQKEYSDLLNTQDMYNDDLIHFS
KSENCKDIYIEKQKGEILGVVIVESGWGSILPTVIIANMMHAGPSEKSGRLNIGDQIMSI
NGTSLVGLPLSTCQTIIKGLKNQSRIKLNIVRCPPVTTVLIRRPDLRYQLGFSVQNGIIC
SLMRGGIAERGGVRVGHRIIEINGQSVVATPHEKIVHILSNAVGEIHMKTMPAAMYRLLT
AQEQPVYI
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atgaaccccgaggaggtggagcatggccaggagctgatcgagcacgtagaagccgacctg
ccccctcctcaacgccgtcgccacgacaaccacattgccaccaacaacggtcgaccccgg
cagcctagcaaccacagtagtgaaaacaacaaccaccctgctccccgctacaggagatat
aatgaggctcctggcacaggtggcagcagggtcagaggggccccacaacgcaggtcaaca
gaggagccagaggcggaacttcacctgggggcccagtcccctccccaaccccagcagcag
cagcaggcccagggtcagtcacagcccatcttgcgtcctgcagtgacacgttaccgcaga
cagggggacagcgaggccaggctcagagcacagcagcagagacacatacagagacagcag
agagaggctgagagggtacaccaacaacaacaacaacctctgccagccccacagcctgtt
cactctctacccccagaacgagaagagccggaggaggatgaggaggagagagggaggtat
agagagagggagacagagggggataactctgcgttaggccgttcggccagcacggagagt
gctttccacacacacacagaccgggcggagggcgactgcgtcatggccctagatcttgag
gcagaggacgagggcggtacttacgaggtgatgcttcgcccagaggcggagggatacaca
gagagcgctgagtcagagcagcaccatccccaccctcagcccaacctgaacctcaactac
cccccccagccccctcccttaccccgggaacccctaccagacgttgggagaccccacagt
caggaggaggcagaggaaaccctgaaccctggtggtggttactctaactacgtctacacc
caacctcccaacctccatgggggaggggccagggtgccgggggaacgggacagcagcgtc
gaggaaaggatggaacctaaaaacgaggcatattctgaagcctaccactactccctgaca
gaacatgtgtatgaggagatcagcgacgccccctctgctgctgctgctgaggggccgact
cctacaaatgccaacgagaacctccagcagagaaaggcggcgttccgtctgtttgagggg
ggggacgggggcggggactactggcagcaggaggcagtggggtcgaggctgcaccactac
gacgagcgctcggacggcgagtcagacagccctgagaaggaggcggagtttgctccgtac
ccgcgggcagacagctgtgaccaggacggtgaagaggacatcaacatgatcgtaacagaa
gtcagagagagttccagctctcagagtctggagagagctgctgcggggttgggggaggga
ggagacaaagaagacatgatgaaaggaggagaggaagagggagactcttacaactcccaa
tccgacacccccacagactccaaacatcccaagggagagatggaaagagagggggatgag
aaagaaggagagggcgttccagccccagcagacagtccctctgaggactcgtctggggtt
cgtaacagtcgtgagaaaagagacgcaatcaccctggccataaaggacatcaaagaggcc
atagaggaggtgaagaccaggacggtgaggtcaccctacacccctgatgagcctaaagaa
ccaatctgggtgatgagacaggacctgagtcccactgctgagtgttgtgacctgcaaccc
tcactagggggcgactctccaggttcagactctcaggcctctcctcagggggcggagtct
tcaatccggacacccatgcttgaagggagtgaaagcttcgagtctccaccgctttccact
aaagagtccaggagaagcctggcctcctttcctacctatgtagaagtcccaggtccatgt
gacccagaggacctgatcgatgggatcatctttgccgctaactacctgggctccacccag
ttgctgtctgacaagaccccctccaagaacgtgcgcatgatgcaggcccaggaggctgtc
agccgcatcaagacggcccagaaattagccaaaaacaagaagaaggctccagaaggtgag
gcccagcccatgacagaggtggacctcttcatctccacccagaggattaaagtcctcaac
gctgactcacaggagactatgatggaccaccctctgaggaccatctcctacatcgctgac
atcggcaacattgtggttctgatggcaaggcgccgtatgccccgcccagactccatggac
agcgtggaggcgtcagaccccgccgaggacgagaaacaacggcagtacaagatgatctgc
cacgtctttgagtccgaggatgcccagctgattgcccagtctataggccaggccttcagt
gtggcgtaccaggagttcctgcgggctaacggcatcaacccagaggacctgagtcagaag
gagtacagtgacctgctcaacactcaggacatgtacaacgacgacctcatacacttctcc
aagtctgagaactgcaaagacatttacatcgagaagcagaaaggtgagattctgggcgtg
gtcattgtggagagtgggtggggctccatcctgcccacagtcatcatcgccaacatgatg
catgctggtccgtcggagaagtcaggccgtcttaatatcggagaccagattatgtctatc
aacgggaccagtctggtggggctacccctgtccacctgccagaccataattaagggtctg
aagaaccagtctcgtatcaagctgaacatcgtcaggtgtcctcctgttaccacggtgctc
atcagacgacctgacctcagataccagctgggcttcagcgtacagaacggcattatctgc
agccttatgcgagggggcatcgctgagaggggaggtgtcagggtcggccaccgcatcatc
gagatcaatggccagagcgtggtggccacgccccacgagaagatcgtccacattctgtcc
aacgctgtgggagagatccacatgaagacgatgccagctgccatgtaccgcctgctaact
gcccaggagcaacctgtttacatctag
DBGET
integrated database retrieval system
