Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139411242
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Entry
139411242 CDS
T10872
Name
(RefSeq) complement C5
KO
K03994
complement component 5
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04080
Neuroactive ligand-receptor interaction
ocla04810
Regulation of actin cytoskeleton
ocla05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
139411242
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
139411242
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
139411242
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ocla01002
]
139411242
Peptidases and inhibitors [BR:
ocla01002
]
Peptidase inhibitors
Family I39: alpha2M family
139411242
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TED_complement
A2M_BRD
A2M_recep
NTR
A2M
C5_CUB
MG4
MG1
MG2
MG3
ANATO
DUF3911
Motif
Other DBs
NCBI-GeneID:
139411242
NCBI-ProteinID:
XP_071013377
LinkDB
All DBs
Position
6:48178180..48243361
Genome browser
AA seq
1692 aa
AA seq
DB search
MKLLLLLCVFHHCCLAGAQEKTYLITAPKLLRLDASEKVVIQLFGYTQEANVHVYLKSSM
DASHIKYADQFVTLNTQNGFLEAVTLRIFPSTFLKDATHAYLEVIVPEQFAQHVKIPVSR
KNGFLFIQTDKGIYTPEQSVKVRAFSLNEDLQPALRPVTLTFRDPELQKVEIVDMTDVNG
IPSMQNPFKIPLKPKLGIWIIEASYTDEFTTKNKAEFEVKEYVLPSLSIHMQPQANYISF
STFEAFKIKISARYIHGAPVANADVFLRFGYIGKTTVILHKSVRREQMTESGDVEVCINM
KKALSLEDGPKELEGMVEKFLYLAVMVQEPTGGISQEAEMVNVKFLKSPYRLSLVATPPF
IKPGLPYAIRVSVKDHLGEPVALVPVKLVNSFIKNKLGVDEKLQCPTLTVDNSKRTKDDG
IALFICNLHSEAESASFIFKTADERLPFGSQAEYTLEAKAYSSPNERYLYIDLPSDYSGL
QVGQHVSIQIYFHARSYLRIETFSYQIISRGKIVKFASEKRLQGTGSQAISFTVTSDMVP
SIRLLVYYILHGEKTPELVADSVWIDVKDKCVNALKTELSFRKKDYKPKDELIFEVKTGQ
DSLVALSAIDTAVYSLRAPLQDPVTRVLRHIEQSDQGCGGGGGKDNADVFRLTGLTFITN
ANAQASQSEDDTCTASVRPKRALSYDQQKEKAKQYGKDFFCCWQGLHQIPTLDTCAHRAN
RLKVKLPSDVKKCRAVFTECCDYSLQLLQTSSDHVLARVEMAILFDLMPTQIRSYFPESW
LWEVQPVRSGQITLNRNLPDSLTTWEIKAVGVFKKEGSSGICVADPIKVSVTQAVSVDVP
LPYSMVRGEQIELRGSVYNQAEDNIKYCVTLTAGAGVCLFQGKPTKDDGIKTTNCDKTSL
LESGSVGLVTFTLMALEVGSHTLTFTLHTDKSRFNDQIVKTIRVVPEGIRTEDLSGGKLD
PQGLYGAASRKVELSNTIPSQLVPKTSVERLLTINGEILGEVLAILNNPDGLRQLVNLPS
GSAEGEIMRVLPIYFVYHYLETTGRWDIMGLEEHNSPLELKRKIREGITSILSFKRPREF
SYSMWKDKEASTWLTALVVKTLGQVDKYVKVDSDMLSNTIFWLINKAQNEDGSFREFSFC
PRVQGASVDSVDQSVFFTSFVMIGIKTAMSVENCGLLEFSLALKRAAGYISDHAPRVKSL
YAKAVAAYALTLDDRDSMQSVILYDGLEKQAREKGNPVEYRYWHEIDARLNPLKPDKASA
QTVETTSYVLLTGLIKAKHNYALPIINWLTQDQRYGGGFHSTQDTILTLEALTEYSKVVK
YTKLDLLIEASYIKTREQLGKIVLTQKKPVGKPIEVTEDKDVRVSTGFGTGVSIVQMKTV
YYKTTETNKNCKFDISIEVHHPNKKSKDTMLHSSRIVACAKYNPPPNEVFTDSSHTVMEI
QLPTGVQPFQEDLNMFRDGLESVISDYKITGDKVVLQLDSVPFDQFVCVGFRIKELFRVG
MVSASLFKIYEYNDQESQCSKLYSPPIETKLLRLCVGEQCHCMAAECCNFKSEMDPSITA
EERRRTTCRDNIKYAFKVKIKSIAEEGDFSTYVANVEDPFKRGLDNVNINTEVEFVKKAS
CSSVDMKIGGQYLIMGADSMQIRVGRSYKYRYPLDSQATVEMWPTECERSPACTKYVDIL
NDYAERVLFEGC
NT seq
5079 nt
NT seq
+upstream
nt +downstream
nt
atgaaactcttactgcttctttgtgtttttcatcactgctgtttggcaggtgctcaggaa
aagacgtacctgatcactgctcctaaactcctccgactggatgcatctgagaaagtggtg
attcagctgtttggctatacccaagaagccaatgtccatgtttacttgaaaagctctatg
gacgcatcccatataaaatatgctgatcagtttgtgaccctcaacacccagaatggcttc
ctggaggctgtcacattgaggattttccctagtacgttccttaaggatgccactcatgca
taccttgaagttatagttccagaacagtttgcgcagcacgtgaagataccagtctctcgt
aaaaatggcttcctcttcattcagactgacaaaggcatttataccccagaacaatcagtg
aaagtgcgagcattctctctcaatgaagatctgcagccagcccttcgacctgtgactcta
actttcagggacccagagttacagaaggtggaaattgtagacatgacagatgtcaatgga
atcccatcaatgcaaaatcctttcaaaatccctctaaaacctaagttaggtatctggata
attgaagcttcttacacagatgagttcaccacaaaaaacaaagctgaatttgaagtcaaa
gaatacgtattacccagtctatccatccacatgcagccacaggctaactacatcagtttc
agtacttttgaagcttttaagatcaagatatccgccaggtatattcatggtgctccagtt
gcaaatgcagacgtattcctacggtttggatacattgggaaaacaactgtcatcctacac
aaatcagtgagaagagagcaaatgacagaaagtggtgacgtggaggtgtgcataaacatg
aagaaagctctatcacttgaagatggacccaaagaactggaagggatggtggaaaagttc
ctgtatttagctgtgatggtacaagagccaactggtggtatctcccaggaagctgagatg
gtcaatgtgaagttcctaaagtccccgtacagactgagtcttgtcgctactcctcctttc
atcaaaccaggactgccatacgctatcagggtgtcagtcaaggaccacttgggggaacct
gtggcattggtaccagtgaagttggtgaattccttcatcaaaaacaaacttggtgtagat
gaaaaacttcagtgtcctacactgacagtggataacagtaagaggaccaaggacgatggg
attgctctttttatttgcaaccttcattctgaagccgagagtgcaagttttattttcaag
actgctgatgagaggttacccttcggtagtcaagcggaatatacacttgaagccaaggca
tactcgtcccccaacgaacgctacttgtacattgatttgccgtccgattactccggcctt
caagttggacaacatgtcagcattcaaatctacttccatgctcgcagctacctccgaatt
gagactttcagctaccagatcatctcgaggggtaagatagtgaagtttgcttctgaaaag
cgtctccaaggtacaggttcccaagccattagtttcacagtgacctcagacatggtgcca
tcgatacgcctgctagtctactacatactgcatggggagaagacacctgagctggttgcc
gactcagtgtggatagatgtcaaggacaaatgtgtcaatgcacttaagacagagctctca
tttcgtaagaaggattacaagcctaaggatgaactgatatttgaagtgaaaactgggcag
gattccctggtggccttatctgctattgacactgctgtctactcacttagagccccactc
caggacccagtgacaagagtgctccgacacattgagcaaagtgaccaagggtgtggagga
ggaggtggcaaagataatgctgatgtcttccgtctcaccggactcacttttataaccaat
gcaaatgctcaggcttcccaatctgaagatgacacatgcactgcttctgtgagaccaaag
cgtgccctctcttatgaccaacagaaagagaaagccaaacaatatggcaaggactttttc
tgctgctggcagggattgcatcaaatcccaaccctggatacctgtgctcaccgtgccaat
agacttaaggttaaactacccagtgatgtgaagaagtgtcgtgcggtgttcactgagtgc
tgtgattacagcctacagcttctccaaaccagtagtgatcatgtcttggcacgtgttgag
atggctattctctttgacctgatgcccactcagatacgcagctacttcccagagagctgg
ctatgggaagtacaaccagtcaggtcagggcagattaccttgaacagaaatctcccagac
tctctgaccacttgggagataaaagctgtcggcgtgttcaagaaggaggggagctcaggg
atctgtgtggcggaccccatcaaggtctcagttactcaggcagtgagtgtagatgtgccc
ctgccctattccatggtgcgtggagagcagatcgagctgcgaggctccgtctataaccag
gcagaagacaatattaagtattgtgtaactctgaccgctggggcaggggtgtgcctgttc
caaggaaaaccaacgaaagatgacggcataaagactaccaactgtgacaagacctctctt
ttggaaagcggctcagttggtcttgtcaccttcactctcatggccttggaagtggggagt
cacactctcacattcaccttacacactgacaagtcaaggttcaacgaccaaattgtgaag
acgatccgtgtagtgcctgaaggcatcaggactgaggacctcagcggaggaaaactggac
ccacagggtctttatggcgccgccagcaggaaggtagaactcagtaataccattccttca
caactggtgcctaagacctctgtggaacgtctccttactattaatggtgagattttggga
gaggtgctggctatcttgaacaaccctgatggcctgcgccagcttgtcaacctacccagt
ggctccgctgagggcgagatcatgagagtcctccccatctactttgtctaccactacctg
gagaccacgggccgttgggacatcatgggcctagaggaacacaacagtcccctggagctt
aagaggaagatcagagagggcatcacaagcatcttatcttttaagaggcctcgtgaattt
agttacagcatgtggaaagacaaggaggctagtacatggttaacagctcttgtggtgaag
actttgggacaggtggacaaatacgtcaaagtagacagtgacatgttgtctaacaccatc
ttctggctgatcaacaaggctcaaaatgaggatggttccttccgtgaattctccttctgt
cccagagtacagggtgcaagtgtagattccgtggatcaatcagtcttcttcacatccttc
gtcatgattgggatcaagactgccatgtcggtggaaaattgtggcttgctggagtttagt
ttggctctgaaacgtgctgctggctacatctctgatcatgctccccgggtgaaaagcctg
tatgcgaaagctgtggctgcctatgctctcacactggacgacagggacagcatgcaatcc
gtgatcctgtatgatggccttgagaagcaagccagggaaaaaggaaacccagttgaatat
cgttactggcatgagatagatgcccgtctgaacccgctaaagcctgacaaggcatcggcc
cagaccgtggagaccacctcctacgtcctactcacaggcttgatcaaagccaaacacaac
tacgccctgcccatcattaactggctgacccaggaccagcgctatggagggggctttcac
tcaactcaggacactattctcaccctggaggctctgactgagtacagcaaagtggtcaaa
tataccaagctggatctgttgatcgaggcatcctacataaagacgagggaacaactgggg
aaaattgtgctcacccagaagaaacctgtgggcaaaccaatagaggtgactgaggataaa
gatgtcagagtgtccacaggctttggtacaggagtctccattgtccagatgaaaaccgtt
tattataaaacaacagagaccaacaaaaactgcaaatttgacatttccattgaagtgcat
catcctaacaaaaagtccaaagatactatgctgcattcctctcgaattgtcgcatgtgca
aaatacaatccccctccaaacgaggtattcactgactccagccacacagtcatggaaatc
caactacccactggggtgcaacccttccaagaagatctgaatatgtttagggatggactg
gaatctgtgatatctgactacaagatcacaggagacaaggttgtgcttcagctggactca
gtcccctttgaccaatttgtctgtgtgggattccgtataaaagaactctttcgagttggc
atggtcagtgcttccttgtttaaaatctacgagtacaatgatcaagagagccaatgttcc
aagctctactccccgcctatagaaaccaagctactgcggctttgtgtaggggaacagtgc
cactgcatggcagcggaatgctgcaacttcaaatcagagatggatcccagcatcactgct
gaggaaagaagacgaactacctgccgtgacaatataaaatatgctttcaaggtaaaaatc
aaatccattgcggaagaaggtgattttagtacttatgtggcaaatgtggaggatcccttc
aaaagggggttggacaatgtcaatatcaacacagaggtggaatttgtcaaaaaggccagt
tgcagttctgtggatatgaagattggtgggcagtacctgatcatgggtgcagacagcatg
cagatacgagttggcagaagttataagtatagataccctttggattcccaggctacagtt
gagatgtggccaactgaatgtgagagaagtcccgcctgcactaaatatgtagacattctg
aatgattatgcagaacgtgttctatttgaaggctgttaa
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integrated database retrieval system
