Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139411245
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Entry
139411245 CDS
T10872
Name
(RefSeq) ATP-dependent DNA helicase DDX31 isoform X1
KO
K14806
ATP-dependent RNA helicase DDX31/DBP7 [EC:
5.6.2.7
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ocla01009
]
139411245
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ocla03009
]
139411245
Enzymes [BR:
ocla01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
139411245
Protein phosphatases and associated proteins [BR:
ocla01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
139411245
Ribosome biogenesis [BR:
ocla03009
]
Eukaryotic type
Pre-60S particles
Helicases
139411245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
139411245
NCBI-ProteinID:
XP_071013381
LinkDB
All DBs
Position
6:complement(48534751..48587882)
Genome browser
AA seq
739 aa
AA seq
DB search
MAEDTLMLNFSSDSAPACHSKSYQRPTSQEKWALKKAQKRKYSGIQKELPNKQQFNGPKT
KDQQPTEDMEEEDVPTHKSPVRKPAPKDAAKALSPETLKPAQRFKAQTKMTPKSKHVGEH
KGGEDSVFIKTSSLFRNNPDIPDVHRPAVTQLKEKVFTSDSFAELDLHPHLVATLTKVLN
VTTMTSVQKETIPVLLSGQDAVVRSQTGSGKTLAYGIPLVQSLQAVEPKIKRGDGPLAVI
VVPTRELAQQSFQIFQKLLKPFTWIVPGVLMGGEKRKAEKARLRKGINILITTPGRLVDH
IKNTLSIAFSAVRWLILDEADRILDLGFEKDLTVILNSLNATGPPRQNVLLSATLTDGLS
RLAAISMKEPVSIQVGENSEGINNLTPDPTTVQGKSDRFAVPERLQQHMVVVPSKLRLVC
LAAFILSKCKFEKGHKIIVFVSSCEAVEFLLILFNAVLSGPKAKQQSPLSFFRLHGNMKQ
EERTEVFQEFSLCKTGILLCTDVAARGLDMPQVTWIVQYNPPTTPAEYVHRVGRTARIGA
KGSSLLFLTPAEMSYVTSLANHNISLSEMKMEMILSTLMLDDRFKVRGKYDGKKSSGAPE
QEVQERATVLQTEFENVVHNDNNSVQAAKRALQSFLRAYTAYPSNMKHIFHIKALHLGHA
AKSFGLRDAPQGLVTAPAKGSNKDKGQAKGKRPLKKFSTEERVASLTRSEYASGIDGDSA
SKKKKKKKSQANGEEDRVE
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atggcagaggatacgttgatgttgaacttctcgtctgactcagctccagcatgtcactcg
aagagttatcagagaccaacgtctcaggagaaatgggctttgaaaaaagcacagaaacga
aaatactcaggaatacagaaagagttacctaataaacaacagttcaatgggcctaagacc
aaggaccaacagcccaccgaggacatggaagaagaggatgtaccaacccataaaagccct
gtccgaaagccagcaccaaaggatgcagccaaagccttgtcccctgagaccctaaaacct
gcccagagattcaaagcccagacaaaaatgactccaaaaagtaaacatgttggggaacac
aaaggaggagaggacagtgtgttcataaagacttcatccctctttagaaataacccagat
atcccagacgtccacaggcctgctgtgacccagctgaaggagaaagtcttcaccagtgac
tcatttgcggagctggaccttcacccccacctggtggcgacgctgaccaaagtgctgaat
gtgaccaccatgaccagtgtccagaaagagaccattcctgtcctcttgtctggtcaagac
gctgtcgtgcgctctcaaacaggatcgggtaaaactcttgcttacgggataccgcttgtt
cagtctttacaagcagtggaaccaaaaattaagagaggggatgggcctcttgctgtcatc
gtggtccccaccagagagctggcccagcagagctttcagatcttccagaagctcctcaag
cctttcacatggatcgtgcctggagtcctgatggggggggagaagaggaaggcagagaaa
gccaggctgcgtaaagggattaacattctgatcaccacgccaggccgactggtggaccac
atcaagaacacgctgagcatagccttcagcgctgtccggtggctcatcctggacgaggct
gaccggattctggacctgggctttgagaaggacctgacagtgatcctcaattccttgaat
gccactggacctcccaggcagaacgtgctcctgtctgctactcttacagatggcttatcc
cggttagctgcgatcagcatgaaggagccggttagcatccaggtgggagagaactctgag
gggatcaacaatctaactccggaccccaccacagtccagggcaagtcagaccgctttgct
gttcccgagaggctgcagcagcacatggtggtggttcccagcaaactaaggctggtctgc
ctggcagccttcatcctgtccaagtgcaagtttgagaagggtcacaagataattgtgttt
gtgtcgagttgtgaggcagtggagttcctgctgatccttttcaacgccgtgctctctggg
ccaaaagccaaacagcagtctccgctcagcttcttccgtctccacggcaacatgaagcag
gaagaaaggacagaagtttttcaagagttctctctctgcaagactggaattctgctctgt
acggatgttgcagcacgtggacttgacatgcctcaggtgacatggattgtacagtacaac
cctccaaccactccagcagagtatgtgcaccgcgtcgggcgaactgcccgtataggagct
aagggaagcagccttctctttctcacccctgctgaaatgtcctatgtcacttctctagca
aatcacaatatcagcctgtccgagatgaagatggagatgattctgtcaacgctaatgctg
gacgaccgcttcaaagtcaggggaaagtatgacggcaagaagtcttccggggctccagag
caggaggtgcaggaaagagcaactgtcctacagacggagtttgagaacgttgtccataac
gataacaactctgtccaagcagccaagagagccttgcagtccttcctacgggcatacact
gcctacccatccaacatgaagcacatcttccatatcaaagccctgcacctgggccacgcc
gccaagagcttcggcctgagggacgccccacagggcctggtcaccgcccctgccaagggc
tccaacaaagacaagggacaggccaagggcaagagacctctcaagaagtttagcactgaa
gagcgggtggccagtctcacgcgctccgaatatgccagcgggattgatggagactccgca
tccaaaaagaagaagaagaagaaaagccaagccaacggagaggaggaccgagtggaatag
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