Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139411320
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Entry
139411320 CDS
T10872
Name
(RefSeq) zinc finger SWIM domain-containing protein 8-like isoform X1
KO
K25207
zinc finger SWIM domain-containing protein 8
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
Ubiquitin system [BR:
ocla04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
139411320
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GFIT
Other DBs
NCBI-GeneID:
139411320
NCBI-ProteinID:
XP_071013645
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Position
1:68597864..68635441
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AA seq
1975 aa
AA seq
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MELMFAEWEDGERFSFEDSDRFEEDSLCSFISEAESLCQNWRGWRKQSAGPNSPTVKIKD
GQVIPLVELSAKQVAFHIPFEVVEKVYPPVPEQLQLRIAYWSFPENEEDIRLYSCLANGS
PDEFQRGEQLYRMRAVKDPLQIGFHLSATVVSPQAGQSKGAYNVAVMFDRCRITSCSCTC
GAGAKWCAHVVALCLFRIHNASAVCLRAPVSESLSRLQRDQLQKFAQYLISELPQQILPT
AQRLLDELLSSQSTAINTVCGAPDPTAGPSASDQSTWYLDESTLSDNIKKTLHKFCGPSP
VVFSDVNSMYLSSTEPPAAAEWACLLRPLRGREPEGIWNLLSIVREMLKRRDSNAAPLLE
ILTEQCLTYEQIIGWWYSVRTSASHSSASGHTGRSNGQSEVAAHACASMCDEMVVLWRLA
VLDPTMSPHRRLELAAQLKQWHLKVIEIVKRGQHRKSLDKLFQGFKPAVESCYFNWEVAY
PLPGITYCSADKKSASFCWARAVQQQRGAKAGLAGDPPEPGGGRSGSSEGGGGDYKGRSL
QQEVAVRPKETIVSKRKGLSAGGGGGVLVRLGGSVSLSLEEGSSKGMYKGAGSSSSTGGK
AKIAQGGKSSSGGSGVVGGKHQAAKRRTSSEDSSLEPDMAELSLDDGSSLALGAEASNTF
DFTPPPPEMLPSPSPLLREPHKYSAGGKGAGNTPMERAFEGKRATLAATLPAAESQPAFP
TKENAAVIVEAAIAVVNVEAEMNGNEEAAIAGDARPSTSVVTVTAAAAKSPHDGRRETGT
GAVALPNQAPEGAAGAGGDPVGEDDYQAYFLNSANEDGAERVSENNNEEEPDIFAGIKPL
EQEGQMEVLFACAEALHAHGYSNDACRLAVELAGDLLANPPDLKVEQPQTKGKKSKVSTS
RQTQVATNTLVKTSFLLTVLSERLELHNLAFSTGMFSLELQRPPASTKALEVKLAYQESE
VVALLKKIPLGLVEMTSIRDRAEQLRDGNFCDYRPVLPLMLASFIFDVLCTPVVSPTGSR
PPSRNRNNEMPGDEELGFEAAVAALGMKTTVSEAEHPLLCEGTRREKGDLALALMITYKD
DQSKLKKILDKLLDRESQTHKPQTLSSFYSSKPAASSQRSPSKHAAHTAHGHGGATGGVS
KHAPNATAAAGSSSSSLQAVAAGGAAGQQAGLAGSGVQNNPTAGECVSEAREQADGVQPA
SCDQPSEAVPFKPEGTVPSRLALGGRGAYSGRCWGSPVRQKKKHTGMASIDSSAPETTSD
SSPTLSRRPLRGGWAAASWGRGQDSDSISSSSSDSLGSSSSSGSRRAGGGARAKSTDTSR
YKGRRPECHAPHVPNQPSEAAAHFYFELAKTVLIKAGGNSSTSIFTQPSASGGHQGPHRN
LHLCAFEIGLYALGLHNFVSPNWLSRTYSSHVSWITGQAMEIGSAALNILVECWDGHLTP
PEVASLADRASRARDPNMVRAAAELALSCLPHAHALNPNEIQRALVQCKEQVHVRYSSVL
QKTHRTTHDNVMLEKACMAVEEAAKGGGVYPEVLFEVAHQWYWLYEQTVGGGSGAQREGP
GRCGANGGAGRRPPEMGHGVMDNIGNMDSSGVATVTASVTAAAVVPVISVGSTIYQSHAL
PGSAMAHPHTQGLHPYTTIQAHLPTVCTPQYLGHPLQHVPRPTVFPVSGGAYPQCVCVPS
QGMHPAFIGAQYPFSVAAGPHPPMAATAVTFPGVPVPSMTQIAVHPYHTETGLPLSTTVA
GAASFSPFYPVGGVHSGATIQAIQGSSLPGISSQPVSLVSAPFPSEDEQHSQPISQQGLH
YLHSAYRVGMLALEMLGRRAHNDHPNNFSRSPPYTEDVKWLLGLAARLGVNYVYQFCVGA
AKGVLSPFVLQEIIMEALQRLNPAHIHAHLRTPAFHQLVQRCQQAYLQYIHHRLIHLTPA
DYDDFVNIIRSARGAFCLTPVGMMQFNDVLQNLKRGKQTKELWQRISLEMATFSP
NT seq
5928 nt
NT seq
+upstream
nt +downstream
nt
atggaactaatgttcgccgagtgggaagacggagagaggttctccttcgaagattctgac
cggttcgaggaggactcgctctgctccttcatatcagaggctgagagtctgtgtcagaac
tggaggggatggagaaaacagtctgctggaccaaattctcctacagtgaagattaaagat
ggtcaggtcatccctctggtggagctatcagccaagcaggttgcattccacatcccgttt
gaggtggtggagaaggtctaccctcctgtccccgagcagctgcagctccgcatcgcctac
tggagcttcccagagaacgaggaggacatccggctgtactcgtgtctggctaacggcagc
cctgatgagttccagcgaggggagcagctgtacaggatgagggctgtcaaagaccctctg
cagataggtttccacctcagtgccaccgtggtgtcgccccaggctggccaatcaaaaggg
gcgtacaatgtggctgtcatgttcgaccgctgccgcatcacttcctgcagttgcacctgt
ggagccggggccaagtggtgcgcccatgtggtggccctctgcctcttcaggatccacaac
gcgtctgcagtctgcttgcgagcccccgtgtcagagtccctgtcccggctgcagagggac
cagctgcagaagtttgcccagtacctcatcagtgagcttccccaacagattttgcccaca
gcccagaggcttctggatgagctcctgtcctcccagtctacagccatcaacacagtgtgt
ggggctcccgaccccactgctggcccctcagcctctgatcagagcacctggtatctagat
gagtcaacgctcagtgacaacatcaagaagactctgcacaagttctgtggcccctctcct
gttgtcttcagtgacgtcaactccatgtacctgtcatccacggagcctccggcggcggca
gagtgggcatgtctgctgaggccgctgagggggcgggagcccgagggcatctggaacctc
ctttccatcgtcagggagatgctcaagaggagagacagcaacgctgcacccctactagag
atcctcactgagcagtgtctcacttatgaacagatcattggctggtggtacagcgtgcgt
acttcggcatcccacagcagtgccagcgggcacacggggcgcagtaacgggcagtcggag
gtggcagcccacgcctgcgccagcatgtgtgacgagatggtcgttctgtggaggctggct
gtcctagaccccaccatgagccctcataggcgtttggagctggctgcccagctcaagcag
tggcatctgaaagtgattgagatcgtgaagcgaggacaacaccgcaagtccctggacaaa
ctgttccagggattcaagccagccgtggagtcctgctacttcaactgggaggtggcctac
ccactgccaggcatcacctactgcagtgcagacaagaagagcgcttccttctgctgggcc
agggcagtgcagcagcagagaggggccaaggctggcctggctggagacccccctgaacct
ggaggagggagatctggcagctctgagggaggtgggggagactacaagggcagaagtctc
caacaagaagtggcggtcaggcccaaagagaccatcgtgagcaagaggaaggggttgtcg
gctgggggcggaggaggggtcctagtgcggctagggggcagtgtgtctctctctctagag
gagggcagtagtaaggggatgtacaaaggcgcaggttcctcctcgtccactgggggcaag
gctaagatagcccaggggggcaagtcatcctctgggggatcaggagtggtagggggaaaa
caccaagcggccaagcggcgcaccagcagtgaggacagctccctcgagcctgacatggcc
gagctgagcctggatgatggctccagtctggcgctgggtgctgaggccagcaacaccttt
gacttcacacccccgccgcctgagatgctgccttcaccaagcccgctactcagagagcca
cacaaatacagtgcgggagggaaaggggccggaaacacgcccatggagcgtgccttcgag
ggcaaacgggccacccttgctgccaccctgcctgccgctgaatcccagcccgccttcccc
accaaagagaacgctgctgtcatcgtggaagcagccattgccgtggtgaatgtggaggcg
gagatgaatggaaatgaggaagcggccatcgctggagatgctcggccctctacctcggtt
gttaccgtgactgcagctgccgccaagtcaccgcatgatggccgccgagaaactggcact
ggagccgtagcactgcccaatcaggccccagagggagcagcaggggcaggaggagaccct
gtaggagaggatgactaccaggcctactttctgaattcagctaatgaggatggggcagag
agagtgtcggagaacaacaatgaggaggaaccagacatctttgctgggatcaagccactg
gagcaggagggccagatggaggtgctgtttgcgtgtgcagaggccctccacgctcacggc
tacagcaacgatgcctgcagactggcagtggagctggctggagacctgctggccaaccct
ccagacctgaaggtggagcagccccagaccaagggcaagaagagcaaggtgtccaccagc
aggcagacccaggtggccactaacacgttggttaagacctccttcctgctgacggtgctg
agcgagaggctggagctccacaacctggccttcagcacgggtatgttctctctggagctg
cagaggcccccagcctccaccaaggccctggaggtcaagcttgcttaccaggagtcagag
gtggtggctctgctgaagaaaatccctctgggcctggtggagatgacatccatacgggac
agggccgagcagctccgagatgggaacttctgtgactacaggcccgtcctgcccctcatg
ctggccagcttcatatttgatgtgctgtgtaccccagttgtgtcccccacaggttcccgt
ccgcctagccgtaaccggaacaacgagatgcctggagatgaagagctgggatttgaggca
gctgtagcagcactgggtatgaagaccacagtgagcgaggcagagcatcctctgctgtgt
gaggggacgaggagagagaaaggagacttggctctggccctcatgatcacatacaaggat
gaccagagcaagctgaaaaagatcttggacaagctgctggacagagagagccagacccac
aagccccagaccctgagctctttctactccagcaagccagctgccagcagccaaaggagc
ccgtccaagcacgctgcccacactgctcacggacacggaggtgccacaggaggggtgtcc
aaacatgcccccaacgccacagctgcagccgggtcctcctcctcctccttgcaagcggtg
gctgctgggggggcggcaggacagcaggcaggtctggcaggcagtggggtgcagaacaac
cccacagccggagagtgtgtcagtgaggccagagagcaagcagatggcgtccagcctgcg
tcatgtgaccagccgagtgaggctgttccattcaagccagagggcacagtgccgagccgc
ttggcgctgggaggacggggggcatacagcgggcgctgctggggctctcctgtccgccag
aagaagaaacacacaggcatggcgagtatcgacagcagtgctcctgagaccacctcagac
agctcccccacccttagtcgacgcccgctcagagggggctgggctgcagcttcctggggg
aggggccaagacagtgacagcatcagcagctcctcttctgattcgttaggctcctcctca
tccagtggctctcgcagggccggaggcggagctagggcaaagagcacagacaccagcaga
tataaaggacgtcgtcccgagtgccatgcaccacatgtgcccaaccaaccgtctgaggcg
gcggcccatttctatttcgagctggccaagaccgtgctgatcaaggccgggggcaacagc
tccacctccatcttcacccagccctcagccagtggaggccaccaggggccccaccgcaac
ttgcacctctgtgcctttgagatcggcctgtacgccctaggcctgcacaactttgtctca
cctaactggctctccaggacctactcctcccacgtctcctggatcacaggccaggccatg
gagatcggcagtgctgccctcaacatcctggtggaatgctgggacgggcacctcactcct
cccgaggtggcatcactggccgacagagcatcacgagcgcgggaccccaacatggttcgc
gctgcggctgagctggccctaagctgcctgccccatgcacacgccctcaaccccaatgag
atccagagggccctggtgcagtgcaaggaacaggtacatgtccggtactcttcagttctg
cagaagacacatcggactactcatgacaacgtgatgctagagaaagcctgtatggctgta
gaggaggcagccaaggggggcggtgtgtaccctgaggttctgtttgaggtggcccaccag
tggtactggctctatgagcagacagtaggaggggggtcaggggcccagcgtgaaggcccg
ggacgctgtggggccaacggcggagctggaaggaggcccccagagatgggccatggtgta
atggacaacattggcaacatggattcctccggcgtcgccacggtgacggcctcagtgaca
gcagcggctgtggtgcccgtcatctcggtgggctccaccatctaccaatcacacgccctt
cccggctcggccatggcccacccccacacccagggcctgcacccctacaccaccatccag
gcccacctacccacagtctgcaccccccagtacctggggcacccactgcagcacgtcccc
cggcccactgtattccccgtgtcagggggtgcctacccacagtgtgtctgtgtgccctct
cagggaatgcacccggcctttatcggtgcccagtacccgttctcagtggccgctggcccc
catccgcccatggcagcgacagcggtcaccttccccggtgttcccgtgccgtccatgacc
cagattgccgtccacccctatcacaccgagaccggcctgccacttagcaccactgtagca
ggagccgcatctttttcccctttctatccagtaggtggcgtccattcaggcgccacaatc
caggccattcaggggtcatctcttcctggaatatcttctcagcctgtctcattggtcagt
gcccccttcccgtctgaagacgagcagcatagccagccaatcagccagcagggccttcac
tacctgcactcagcatacagagttggcatgctagcattggagatgctgggcaggagggct
cacaacgaccaccccaataacttctcccgcagccccccatacacagaggacgttaagtgg
ctcctgggcctggctgcacggctaggggtgaactacgtgtaccagttctgtgtgggtgcg
gctaagggtgtgctcagccccttcgtccttcaggagatcatcatggaggctctccagaga
ctgaaccccgcccacatccatgcccacctccgcacgcctgccttccaccaactggtgcag
cgctgccagcaggcctacctacagtacatccaccaccggctgatccacctgaccccggcc
gactacgacgactttgtcaacatcatccgcagcgcccgtggggctttctgcctgacacct
gtgggcatgatgcagttcaacgacgtgctgcagaacctgaagaggggcaagcagaccaag
gagctgtggcagcgcatctctctggagatggccaccttctccccatga
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