Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139411329
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Entry
139411329 CDS
T10872
Name
(RefSeq) uncharacterized protein isoform X1
KO
K24644
PR domain zinc finger protein 11 [EC:2.1.1.-]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139411329
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
139411329
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Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
Myb_DNA-bind_4
SET
Zn_ribbon_PRDM4
FOG1-like_PR
Motif
Other DBs
NCBI-GeneID:
139411329
NCBI-ProteinID:
XP_071013670
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Position
6:56309793..56322392
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AA seq
705 aa
AA seq
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MAESLAIQDHSTEADLCTKYEIKDVEAFETEGASQRLKVDHLLFTIERHQKCYFWFCEEC
KEYFIDECPTHGPPVFVPDTPVPVGVPNRAALTTPNGIEVIQEGSEVDVCCVDKDIPRGA
LFGPYQGEVMSQDKSSGFFSGMLVDKNNSYKSIDVSDETKANWMRYVRNSSEDIERNLTA
FQHGEHIYFQVCRDLSVGERLRVWYSDDYMDRLHRMSQDTIGSNLATVEKDSRVWSSPWN
VTARDREATQTLIEHYGSPEIQSLLNDRTTRTKQIFEIIASRMEAQGFLISENSWQAGKR
CFQKWRNMERTYKDYVLASKRTDAGRRKQPEFYDQFHALMGQRLSSKLAAADTPARALAK
LKPKAVAPTPSLPLYAIVVPSGHPVNLGIPSTCSPEAEIGVHAGTTEPEPLARKSRSERV
PHPKILQSNAEEERAENQLQKGRRRSWLGDDRAAENGGSLPVWSERKMISQDIEATEALV
ELYSSPEIQGLIRENKTRTKRIFEIIASRLKEQGFPISDVPEQAGERCFQKWRNLSRAYK
EYILHPEKADMAKRKLPAYFNRLQDLIGHRLSLKLSEDSPEPDGSMGDAEADAGVEDISQ
NLLHIVEVPASPTDIVSPPSTSASFSSSHTGNPLHVGASGRKRRRMANILDVFQGYREED
KRLQEERERRAEERFNQLRSLLQQQHTETMAVMRELINSMKMKKQ
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atggcagagtcacttgccatccaggaccattcaacagaagcagacctatgcactaagtat
gaaataaaagacgttgaggcctttgagactgaaggagccagccagagattgaaagtcgac
cacttgcttttcaccattgagagacatcagaaatgttacttctggttttgtgaagagtgc
aaagaatattttattgatgaatgccccacacatggccctccagtttttgtgcctgacacc
cctgtgccagtgggcgtcccaaaccgtgccgcccttactacccctaatggcattgaggtc
attcaggaaggcagcgaggtggacgtatgctgcgtagacaaagacattcccaggggggca
ctatttggtccttaccagggtgaagtgatgtcacaggacaagtcctctggtttcttctcc
gggatgttggtggacaaaaacaactcatacaaatccattgatgttagcgacgaaaccaaa
gccaactggatgaggtatgtccgaaattcttcagaggacattgagcgaaacctgacagcc
ttccagcatggcgagcacatctacttccaggtgtgccgtgacctgtcagtgggagagagg
ctgcgggtatggtacagtgatgactacatggaccgattacaccgcatgtcccaggacacc
atcggcagcaacttggccacagttgaaaaggactcacgagtgtggtcaagcccctggaat
gttacagcccgggaccgggaggccacccagaccctcatcgagcactacgggtccccagaa
atccagagcctactgaacgaccggacaaccagaaccaagcagatctttgagatcattgcc
agtcggatggaggcacagggcttcctgatcagtgagaactcctggcaggctggcaagcga
tgcttccaaaagtggcgcaacatggagcgcacatacaaagactatgtgctggcgtccaag
aggactgacgctggacgcaggaaacagcccgagttctatgaccagttccatgcactcatg
ggccagaggctgagctccaagctggctgctgctgacaccccagccagggcgttggccaag
ctgaagcctaaagctgtagcaccaactccaagcctgcccctctacgctattgtagtccca
tcaggccatccagtcaacctcggtataccctccacctgcagcccagaggcagagattgga
gtccatgcaggcaccactgagcctgaaccgctagccaggaagtccaggagcgaacgggtc
ccacatcccaagatactccagtcaaatgcagaggaggagagggcagagaatcaactccaa
aaggggaggaggaggtcatggcttggggatgacagagctgctgagaacggtgggtccctg
cctgtgtggtcggagcggaaaatgatcagtcaggacattgaggcaacggaggctttagta
gagctgtacagctctccagagatccagggactaatcagggagaacaagacccgaaccaag
aggatctttgagatcatagctagcaggctaaaggagcaaggcttccccatcagtgatgtg
cctgagcaggcgggggagcgatgcttccagaaatggcggaacctatcgagggcatacaag
gagtacatcctccacccagagaaggctgacatggcaaagcggaagcttccggcctacttc
aacaggctccaggacctcataggccaccggctcagccttaaactatctgaagactccccc
gagcctgatggcagcatgggagatgctgaggcagatgcaggggttgaggacataagccag
aatctgttacacattgtggaggtgccggcgagccccactgacattgtcagtcccccctcc
acttctgcctccttctcctcttcacatacaggaaaccccctccatgttggagccagtggg
cggaagagaaggaggatggcaaacatattggatgtctttcagggttacagggaggaggac
aaacgattgcaagaggaaagggaaaggagggcagaggagcgctttaatcagctgcgaagc
cttctgcagcaacagcacacagagactatggcagtgatgagagaactgatcaattccatg
aagatgaaaaaacaatga
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