Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139411332
Help
Entry
139411332 CDS
T10872
Name
(RefSeq) 26S proteasome regulatory subunit 6A isoform X1
KO
K03065
26S proteasome regulatory subunit T5
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
139411332
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
ocla03051
]
139411332
Proteasome [BR:
ocla03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
139411332
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Prot_ATP_ID_OB_C
AAA_5
nSTAND3
AAA_16
RuvB_N
AAA_2
AAA_22
DUF815
DUF5827
Mg_chelatase
PhoH
AAA_33
AAA_7
CCDC22_CC
AAA_14
AAA_28
ATPase
Sigma54_activat
Golgin_A5
IstB_IS21
RNA_helicase
AAA_24
Parvo_NS1
AAA_11
Defensin
Motif
Other DBs
NCBI-GeneID:
139411332
NCBI-ProteinID:
XP_071013679
LinkDB
All DBs
Position
6:56376217..56386126
Genome browser
AA seq
427 aa
AA seq
DB search
MASLNDRSVWDEVEDGIGEEVLKMSTEEIVQRTRLLDSEIKIMKSEVLRVTHELQAMKDK
IKENTEKIKVNKTLPYLVSNVIELLDVDPNDQEEDGANIDLDSQRKGKCAVIKTSTRQTY
FLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLD
KQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLA
GPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLE
LLNQLDGFQPNMQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRK
MNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELNHEDYMEGILEVQAKKK
ANLQYYA
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgctgaatgacagatcagtttgggatgaggtggaggatgggatcggcgaagaa
gtcctcaaaatgtccaccgaagagatcgttcagcggacacgtcttctggacagtgaaata
aagatcatgaagagtgaggtattgagggtaacccatgagctgcaggccatgaaggacaaa
atcaaagaaaacacagagaagatcaaagtgaacaagaccctgccgtacctggtctccaat
gtcattgagcttctggatgtggacccaaatgaccaggaggaggatggagcaaacattgat
ctagattcccagaggaagggcaaatgcgctgtcatcaaaacatctacaagacagacatac
ttcctcccggtcattggcttggtggatgcagagaagctgaagccgggagacctcgtgggg
gtaaacaaggactcatacttgatcctggaaaccctgcccacggagtatgactccagagtc
aaagccatggaggtggacgagcgccccactgaacagtacagtgacattggtggattagac
aaacagatccaggagctggtggaagcaattgttctgcccatgaaccacaaggagaagttt
gagaacctgggtattcagccacctaagggggttttgatgtatggccccccaggcacaggg
aaaaccctactggctagggcctgtgctgcccagaccaaggccacatttctcaagctggct
ggcccacagctggtccagatgttcattggtgatggtgccaagcttgtccgagacgccttt
gccctggccaaggagaaggccccctccatcatcttcatagatgagctagacgccattgga
accaaacggtttgacagtgagaaagcaggtgacagggaggttcagagaactatgcttgag
ctcctcaaccagctggatgggttccagcccaacatgcaagttaaggttatcgctgccacg
aacagggtggatatcctagatcccgcactgctgcgttctggacgtctggaccgtaagatt
gagttcccaatgcccaatgaggaagcacgagcccgcatcatgcagattcactcacgcaag
atgaacgtcagccctgatgtcaactacgaggagctggccaggtgcactgatgatttcaat
ggcgcccagtgcaaagcagtgtgtgtggaggcgggtatgatcgcccttcgcaggggggca
actgagctcaatcatgaggactacatggaaggcatcttagaagtacaggccaagaaaaag
gccaacctgcagtactacgcctaa
DBGET
integrated database retrieval system
