Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139411346
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Entry
139411346 CDS
T10872
Name
(RefSeq) protein MTSS 2-like isoform X1
KO
K20128
metastasis suppressor protein 1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
139411346
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139411346
Membrane trafficking [BR:
ocla04131
]
Endocytosis
Bin/Amphiphysin/Rvs (BAR) family proteins
I-BAR proteins
139411346
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IMD
WH2
Motif
Other DBs
NCBI-GeneID:
139411346
NCBI-ProteinID:
XP_071013703
LinkDB
All DBs
Position
6:57387589..57405411
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AA seq
733 aa
AA seq
DB search
MRGERFIPSSPDTPYSSNHFFLSSSLFYVTLWFFLVTSLLPSSPPFVLPCPATCILSTYP
IPHSLNTMPLPSVSLSLLLVPVPCALPPGSTGRGDLQPQLDSAMHDVNDMYLLMEETEKQ
AVRRALVEERGRFCTFIGFLQPVVNGEIAMLGEITHLQAIIDDLTVLTTDPHKLPPASEQ
VIKDLKGSDYSWSYQTPPSSPSSSGSRKSSMCSSVNSAHSSASRSSGGSQTHSPSSSYRY
RSLAHPPPGNAHRLSSVSSHDSGFISQDANVYSKPPSPMPSDITSQKSSSSASSEASETC
QSVSECSSPTTFGSSFATFRPALSHTGSIRPLSVILPASPPYNYSPGSNTTSPTSKVPCW
KDWSKAGSYEQPLAATLQRRKEPMDRLKESEASPGSQGYAGAHPDDVQRSRMTPATIAAK
HGEEVSPAASDLAMVLTRGLSMEQQKSNRDSLQYSSGYSTQTTTPSCSEDTIPSQGSDYD
CYSVNGDAEGEASTDFDKSSTIPRHSNIGQNYRRMIQTKRPASTAGLPSGAQGGVLGGGG
GIGTPGTATIRRTPSTKPGVRRTLSNAGPIPIRPPIVPVKTPTVPDAPGGYPGPPVRVGS
EECVFYVADDSSPNALEYVKASPKRLSLPNTAWGSGGAMEMSVYVQHGSEEDQMIAANRH
SLVEKIGELVASAHALGEGQFPYPNLPDDPPPGPAPQHDPQAPGSGTDVLVSIRRGVRLR
KTVSNDRSAPRIL
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgagaggggagagatttatcccttcaagcccagacacaccatacagttctaatcatttc
tttctctcctcctctctcttttatgtcacactttggtttttccttgtgacctctctgtta
ccctcttctcctccttttgtcctcccttgtcccgctacctgcattctctctacataccca
atcccccactccctgaatactatgcccctgccctctgtttccctttccctgctccttgtc
cctgtcccctgtgctcttcctcctggctcaacaggccgaggggacctgcagccccagctg
gatagtgccatgcatgatgtgaatgacatgtacctgctgatggaggagacagagaagcag
gcggtgcgcagagctctggtggaggagaggggacgcttctgcaccttcatcggcttcctg
cagcctgtagtgaatggagagattgccatgctgggagagatcactcaccttcaggccata
attgatgacctcactgtgctgaccactgatccccacaaactgccccccgccagcgagcag
gtgatcaaagacctgaagggttcagactacagctggtcctaccagacccctccctcctcc
cccagcagttctggctccaggaagagcagcatgtgcagcagtgtgaacagcgcccacagt
agcgcctcccgctcctccggaggctctcagactcactcacccagttcgtcctatcgctac
cgcagcctggcccacccgccaccggggaacgctcaccgcctcagcagcgtctcttcccac
gactcaggcttcatatcgcaggacgccaacgtctactccaagcctccctcgcccatgccc
tctgacatcaccagccagaagtcgtcaagctctgcatcctcagaggcatccgagacctgc
cagtcagtcagtgagtgcagctctcccacaacgtttggctcgtccttcgctaccttccgc
cctgctctctctcacactggctccatcaggcctctctctgtcatacttcctgcgtcccca
ccctataactactcccctggatccaacactacctctcccacatcaaaggttccttgctgg
aaggattggtccaaggcaggttcttatgagcagccattggcagccacgcttcagcggagg
aaggagcccatggataggctgaaggagagcgaggcatccccgggctcccagggatatgct
ggtgctcacccagacgatgtccagaggtcccgaatgacccccgccaccatcgctgccaag
cacggcgaagaggtgtctccagcagccagtgacctggccatggtcctgacccgtggtctc
agcatggagcagcagaagagcaacagggactccttgcagtactctagtggctacagcacc
cagaccaccacgccctcctgctccgaggacactatcccctctcaggggtcggattatgac
tgctactctgtgaatggagatgctgaaggtgaggcgtcaactgactttgacaagtcctcc
accatcccccgccacagcaacatcggccagaactaccgacgcatgatccagaccaagagg
ccggccagcaccgctggtctgcccagtggggcccagggcggagtgcttggagggggaggg
ggcattgggacccctgggactgccaccatccgccgaaccccatccaccaagccgggtgtg
agacgtaccctgtccaacgcgggccccatccccatccgcccgcccatagtgccagtgaag
acacccacggtgcctgatgctcctggggggtaccccgggcctccggtacgtgtgggcagt
gaggagtgtgtgttctacgtggcggatgactcctcccccaacgctttggagtatgtgaag
gcctctcccaagcgtctgagcctgcccaacacagcgtgggggtctgggggagcgatggag
atgagtgtgtatgtccagcacggctctgaggaggaccagatgatagccgctaaccgccac
agcctggtggagaagataggagagctggtggccagtgcccatgcccttggggagggacag
ttcccctaccccaacctccctgatgaccccccgcctggcccggccccccagcatgacccc
caggcccccgggtcaggcaccgacgtgctggtgtccatccgcaggggcgtgcggctccgc
aagaccgtctccaacgacaggtctgcgcccaggattttgtga
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