Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139411350
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Entry
139411350 CDS
T10872
Name
(RefSeq) zinc finger protein 536-like
KO
K27242
zinc finger protein 536
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139411350
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
139411350
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2_assoc
zf-C2H2
zf-C2H2_4
zf-H2C2_2
zf-H2C2_5
zf-Di19
zf-C2H2_15
zf-C2H2_7th_ZNF462
Zf-C2H2_ZNF451_C
DUF7838
zf-C2HE
Zf-C2H2_ZNF451
zf-C2H2_16
zf-C2H2_REST
DUF7410
zf-C2H2_11
Motif
Other DBs
NCBI-GeneID:
139411350
NCBI-ProteinID:
XP_071013712
LinkDB
All DBs
Position
6:complement(58350783..58525137)
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AA seq
1389 aa
AA seq
DB search
MEDSSLCLGASSAVSDADRDHLSNTVLNGRYPISQKLHQLTAQLGHAFPDLQSRQQIPEE
KAATPLDEKSHAALASQPISSQMALLANQLNRDIDASALANLNGRVDLQQFLNGQNLGIM
SQMNDIEDDARKNRKYPCPLCGKRFRFNSILSLHMRTHTGEKPFKCPYCDHRAAQKGNLK
IHLRTHKLGNLGKGRGRVREENRLLHELEERAILRDKQIRSSSLLQPAQPLQHQPHLGPQ
TQQQQQQPGSACGLLTPTSLGTPDSLSQPSSSPKPASAQDDQALNPPTGFRCTFCKGKFK
KREELDRHIRILHKPYKCTLCEFAASQEEDLISHVEKAHITAESAAGQGAAGGTEKPANE
FRCEVCGQVFSQAWFLKGHMRKHKDSFEHVCQICGRRFKEPWFLKNHMKVHLNKLAIKSK
PPAEDINAVNTMNSMAQEAHANLYSRYISCLQGGFLSPDKQGLSEQHHMLAKAGIAMKEK
EMLGKLLGPMAGMGHGLGEGEKRSLLGCLNLVPPLKSSCMERLQAAAKVAEMDPLNSYQA
WQIMARGMAMDRAFMPKEQHHEQHHEERTNAAGMAFTKEKHDYPMMGSNDGSNQKQHIEA
LHGSKAGSGAMMPLKDDRVGFDSHRDFMPHHGGHGLGLGHGLEYNHLTSLKEKPTECPDC
GRVFRTYHQMVVHSRVHNKERRPIEEAIQQQNNTTGLDERRGSASDPESQSISRSTTPGS
SNVTEESGAGGGHSQTGSVQDDSPHPSSPSSDVGDDLGKTAGSVQQAPSQHRDRSLGSAI
KDCPYCGKTFRTSHHLKVHLRIHTGEKPYRCPHCDYAGTQSASLKYHLERHHRERQNGGG
PSSGHAPLSEHKEEHGKGGVFARPDVLRGVFKGMPSSLDFRGGPLHPHQWAPPGMLSPRE
RERDRERERNGLGSDTLSESMKSPEGPSAADVPASFRDLGRAYQSMVGNGVNFQGSLQAF
MDSFVLSSLKKEKEMRESHLQSQHYFESGEPKTKRADTGEEKAEAKPSTGKPGSQYEPLD
LSVNVKPETGSLPGSSVTFQDNVAWHGCLFCSFTTASVELMALHLQANHLGKAKQCKEGK
EHQGEPSHFLKASMGPAHLHDRDNDREGEQSQSAWSNHMDPHASMGAFQSDFYKQYGGMY
DGSPRTPGLQGFGATCPDPALEQQSQARETAGDELSDKASCGELEDQAQSEDDEGRDGER
CHSTESSSAQPERQRPHSDDEEEEEEEDGMEGEDEDSATYQMPKQTQAVSPAREAQRPRA
SLGPGAPFAPQFQPQPPLEKQWQQGLGLLSSPGGSPGLLKPEHAHLEQQMNMLSVLRAYS
SENLAAFNGLGSGSNSGVGIKRPDAPIHLWVGEEEGHGALGPALTLDPNLALPNLADTET
HDAASLNRD
NT seq
4170 nt
NT seq
+upstream
nt +downstream
nt
atggaggactctagtttgtgccttggtgcgtcttcagcagtatcggacgctgacagagac
catctgagcaacacagtgctaaatggccgataccccatcagtcagaagctccaccagctg
acggcccagctgggccacgcctttcccgacctacagagccgacagcaaatccctgaggag
aaagctgccaccccattggatgagaagagccacgctgccctggccagtcaaccaatcagc
agtcagatggcactactcgctaaccagctcaaccgggacatagatgcaagtgccctggcc
aacctgaatgggcgtgtggacctgcagcagtttctcaatgggcagaacctgggcatcatg
tcccagatgaacgacattgaagatgatgcccgcaagaacaggaagtacccttgtccgttg
tgcggcaagcgattccgcttcaacagcatcttgtcgctacacatgcgcacacatacaggt
gagaagcctttcaagtgcccctactgcgaccatcgagcagcacagaagggtaacctcaaa
atccacctacgcacccacaagctgggaaacctcggtaagggacgcggccgtgtccgtgag
gagaaccgtcttctacatgagctggaggagagggccatcctaagggacaagcagatcagg
agcagcagcctccttcagccagctcagcccctgcagcaccagccacaccttggccctcag
acccagcagcagcagcaacagcctggctctgcctgtggcctcctcacccccaccagcctg
ggaactccagactccctctcccagccgtcgtcctcccccaagccggccagcgcccaagat
gaccaggccctgaacccacccactggattccgctgcacgttctgcaagggcaagtttaag
aagcgggaggagctggatcgtcacatccgcatcctgcacaagccctacaagtgcaccttg
tgtgagtttgctgcctcgcaggaggaggacttgatcagccatgtggaaaaagcccatatc
acggccgagtcagctgcgggacagggtgcagctggcggcactgagaagcctgccaacgag
ttccgctgtgaggtgtgtggccaggtcttcagccaagcctggttcctgaagggccacatg
cgcaaacacaaggactcatttgaacacgtctgccagatctgtggtcgtcgcttcaaggag
ccctggtttctcaagaaccacatgaaggtccatctcaataagctggccatcaagagcaag
cccccagcagaggacattaatgctgtcaacaccatgaacagcatggcccaggaggcccat
gctaacctctactcacgctacatctcctgcctgcagggcggcttcctatccccagacaaa
cagggtctgagtgagcaacaccatatgctggccaaagccggcattgccatgaaggagaag
gagatgctggggaagctgctaggccccatggcagggatgggccatggccttggtgaaggg
gagaagcgctctctcctgggctgtctgaacctggtgccccccctgaagtccagctgcatg
gaacgcctccaggcggctgccaaagttgcagaaatggacccgctgaatagctatcaggcc
tggcagatcatggcacgaggcatggccatggaccgcgcctttatgcccaaggagcagcac
catgagcagcaccatgaggagaggaccaatgctgccggcatggccttcactaaagagaag
catgactaccctatgatgggctccaacgatggctccaatcagaagcagcacatcgaagct
ctgcatggctcgaaggccggcagtggagccatgatgcccctgaaagacgacagagtgggt
ttcgacagccaccgtgacttcatgccacatcatggcggccatggcctgggcctgggccac
ggcctggagtacaaccacctgactagcctgaaagagaaacccacagagtgtcctgactgt
ggccgggtcttcaggacctatcaccagatggtggtccactctcgggtgcacaacaaggag
cggcggcccatagaagaagccatccagcagcagaacaacaccacaggactggatgagcgg
cgtggctcggccagcgacccagagtcccagtccatcagcaggtccaccacccctggatcc
tccaacgtgacagaggaaagtggagccggaggtggccactcccagaccggcagtgtccag
gacgacagcccacacccttcctccccatcttcagatgtcggggatgacctggggaagacg
gcggggagtgttcagcaggccccctcccagcacagggacaggagcctgggctcggccatc
aaggactgcccctactgtgggaagaccttccgcacctcccaccacctcaaggtccacctg
aggatacacacaggagagaaaccctacaggtgcccacactgcgactatgcaggcacccag
tctgcctcactgaagtaccacctggagcgccaccaccgtgagcgacagaatggcggcggc
ccctcctccggacacgcccctctctctgagcacaaggaagagcacggcaagggtggcgtc
ttcgcccgccctgatgtcctccgcggtgtcttcaagggcatgccctccagcctggacttc
agagggggaccgttgcacccccaccagtgggcccctcccggtatgttgtcccccagggag
cgtgagagggacagagaacgagagcgtaatggcctgggatctgacactctctctgaaagc
atgaagagcccagagggcccctccgccgcagacgtcccagccagcttcagagacctaggt
cgggcgtaccagagcatggtgggaaacggtgtcaacttccagggctccctgcaggccttc
atggacagctttgtcctcagctccctgaagaaggagaaggagatgagagagagccacctg
cagtcccagcattactttgagagtggtgagcccaaaaccaagagggctgatactggtgag
gaaaaggctgaggccaagccttcaacgggcaagcctgggtcccagtacgagcctctggac
ctgtctgtcaatgtcaaacctgaaacaggctctctgcctggctcctctgtcaccttccag
gacaacgtggcgtggcatggctgcctcttctgctccttcaccactgcctctgtcgagctg
atggccctacacctgcaggccaaccacctaggcaaggccaagcaatgcaaggagggcaag
gagcaccagggagagccctcccacttcctcaaggccagcatgggcccagcccacctccat
gacagagacaatgacagagagggggagcagagccagtcagcctggtccaaccacatggat
ccccacgccagcatgggagccttccagagtgacttctataagcagtatggaggcatgtat
gatggctccccaaggaccccgggcctccaggggtttggagcaacatgccctgacccagcc
ctggagcagcagagccaggccagagaaacagctggggatgagctctcagacaaggcctcc
tgcggggagctggaggaccaggcacagtctgaggatgatgaaggcagggatggagagcgc
tgccacagcaccgagtcctcctccgcccaaccagagagacagcgaccccactctgacgac
gaggaggaagaggaggaagaggacgggatggagggggaagatgaggacagtgccacctat
cagatgccgaagcagacgcaggccgtgtccccggctagagaggcccaacgaccaagggcc
tccttgggccctggggcccctttcgctccccagttccagcctcagccgcccctggagaag
cagtggcagcagggcttgggtctcctttcatctcctggtggttccccggggctgctgaag
ccggaacatgcccatctcgagcagcagatgaacatgctgtccgtcctgagggcctacagc
tcggagaacctcgcagcgttcaacggccttggaagcggctcaaacagcggcgtcggcatc
aagagaccagacgcacccattcatctgtgggtaggagaggaggaaggccatggagccctg
ggccccgcgctgaccctcgaccctaacctcgcgctgcctaacctagctgacactgagacg
cacgacgcagcctctcttaacagagactaa
DBGET
integrated database retrieval system
