Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139411379
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Entry
139411379 CDS
T10872
Name
(RefSeq) piezo-type mechanosensitive ion channel component 1-like
KO
K22128
piezo-type mechanosensitive ion channel component 1/2
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139411379
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ocla04040
]
139411379
Membrane trafficking [BR:
ocla04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
139411379
Ion channels [BR:
ocla04040
]
Other channels
Mechanosensitive channel (Piezo)
139411379
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piezo_TM1-24
Piezo_TM25-28
Piezo_THU9_anchor
Piezo_cap
THU_Piezo1
FAM210A-B_dom
Motif
Other DBs
NCBI-GeneID:
139411379
NCBI-ProteinID:
XP_071013763
LinkDB
All DBs
Position
6:complement(61158468..61238655)
Genome browser
AA seq
2556 aa
AA seq
DB search
MELQVVCGLLYCILLPTFLLAACLFRYNALSLVYLLYLLLLPWFLWPNKHTLRGHTGRFI
KALFCTSLLFLLAHVSFQICLYTIPDLDHALGNNCSLWDTLSRHVGVSRLPLDDPWSVVR
LLTPDLGVFVISLVTLVVCNRLVKRRDDVTFLPVASDSTQGTEDGSETKEGEEEEEEEGD
EEGISSPSEPGDDVVSAATRAKQLAARLRVTAQKVLRDLGRILAITLLALAGITLPSAFS
AIYFLLFIGVCTWWACHFPISHLGFNVLCVMVGFFTAGHLVCLYLYQCPIAQGIFPPASL
WARLFGLKDIIKPGNCSASYDLILNTEHDWPVYVNPGILLLLSITVATVLKISSHHGSAD
KDEEGAQLVKGTEAGGGEDVELKPWSAQRQPSQDDTENTLLSIEHTGDHVTNSSSHQDLG
PGLSSAPDGQHGDHPLQLLGRVVMQQSYVCALIAMMVWSITYHSWLTFVLLLWACLIWML
RARRHFATLCSPFILLYGLALCFLQYVWAMDLQPELPRTVGTMSLRQLGLDRAQYPCLRL
GAMLLYTLTFWLLLRQSVKDNFSRKKGRSAPLQEVTTGEGSGQNESVLKVVGRLVMSCYA
KYWIYVCGGMFIMVSFAGKLVGYKIIYMLLFLLCLCLYQVYYSLWRRLLKVFWWLVVAYT
MLVLITIYTFQFEDFPAYWKNFTGFTEEQLADIGLETFKLTELFTSILIPGFFLLACILQ
LHYFHKPFMRITDLDHVTPIHRKRNRHRPEVRRCDDGAVFEEDDLVTDLRDDESEEDEMM
PSKWGLVMNRLIVLFRKFSDTLTQIQVLIWRVLELHILKMVAFFVVWVALGEPSVMNLVL
VVLWAFAMPYTRFRHMACCLSTVWVCIIIVCKMLYQLSIVDPVEYSNNCTVPLANETNLK
DAEVLNSTLYREPVDPANWFGFRKDATVLGYSKNHLLVLMLLVFEATVNRHQDHHYRQQQ
RSPPLIPAIFPQATRDTLDQGLLACIKYLLNYSFYKFGLEICFLMMVNVIGQRMNFLVII
HSCWLVAIMVRRRRAAIAQIWPKYCLFLSIFMIYQYILCVGIPPALCIDYPWRWNTPVII
NSALIKWIYLPDFYTIPNSKNLIADFVLLMCASQQWKVFEDEKREEWMVLAGENTDDPNP
MDDRPFNPAPNFINCRCYLDMSKVLVFRHMFWFVLSVVFVTGATRISVFGLGYLLACFFF
LLFGTKLLRKPSRTRLVMWDCLIIYNVAVIISKNMLSILACVFVLEMQKSFCWVIQLFSL
VCTVKGYYDPKTVSDKACTLPVEEAGIIWDSICFFFLLLQRRVFLSCYFLHVTADLQASA
RQASRGFELFRASIVKNMRFHQEVEKKSLSQLKRSMERIRSKQEKCKEGRRKSDTKADPA
SEPQREKRSHKRGKKWQEPWLDHAKVLHSADYYLFESDSEEEDELFSEEKKPQKQTAFQL
AYRAWVTSAKATLRERQERQKEQRRLEREERRQRKQDSSPASGHEGSLEFEESISHEEID
DNDELDGEGSGKADIVQRILDVLMLLWVVFLAMVDGLTEWLNLITKQYVDTSTVLCNERY
HLIHNVSQGSLREPMEDQLSQGSESPTMETCLGDIEGDTDHMNRTSATSGLELVELSERE
HHSGTTLCCSEPTLEQLGVEPEPQHKSRYRHSRTASEMLTDRQFFVEELVQCREFYSSQN
RLLKLQFALYNLLAANSELVCYFIIVLNNMVTASVISVVLPILIFLWAMLAVPRPTKKFW
MTAIVYTEVMVVVKYLFQFGFFPWNSVYELTLNEDKPFFPPRILGLEKTDNYIRYDLLQL
LALFFHRSLLQRYGLWDQECALEEKPSRPSEEANKKEGGEGEGVEVHVHPSPGPSLMDLE
ELKPDEDQKAEPEPEPEPEPEPSTSLVPTPEPPPSLPVEGPKKKGSIMRFRKKKLLSKEA
LDIKAEKKEQKKKQKGKRREAASKKLIAAGEKIKHLTITAVQNVYKPCHEFFSDILHAPY
RAATDVYALMFLTDVVDFIIIVFGFWAFGKHSAAADIASTLSEDQVPEAFLVMLLIQFST
MIIDRALYLRKTVLGKLIFQIILVFGIHLWMFFILPAVTERMFSQNSVAQLWYFFKCIYF
ALSAYQIRCGYPTRILGNFLTKKFNHLNLFLFQGFRLVPFLVELRAVMDWVWTDTTLSLS
NWMCVEDIYANIFIIKCSRETEKKYPQPKGQKKKKIVKYGMGGLIIFFLICIIWFPLLFI
SLVRSVVGVVNHPVDVTVTVKLGGYEPLFTMSVQQQSIQSFTEEDYNKLTTNFYDNARAM
QFITLYSYEDIVTAKIEGSSGSVWRISPPSRQEVVKELLGSPVDMTLRLAWTFQRDLGKG
GTVEHTSDKYSIDLDPGNPVRADLASLLVGNRTDPVRVPHMFPNYIRAPNGAEAKPVDQL
YKGDEDGYQDITLSLMRDRSLNSTRGAQEWWDISIADCTPSKGACGVLPMVIFNDKVSPP
SLGFLAGYGIMGLYVSVVLVIGKFVRGFFSEISHSIMFEELPCVNRILKLCTDIFLVRET
GELELEEELYSKLIFLYRSPETMIKWTRDKLSSDNR
NT seq
7671 nt
NT seq
+upstream
nt +downstream
nt
atggagcttcaggtggtatgtggactgctctactgcattctgttgccgacgttcttgtta
gcagcctgcctgtttcgctacaatgccctgtctctggtctacctgctctacctgctgcta
ctgccatggttcctgtggcccaacaagcacacactacgaggacatactggacgtttcatc
aaggctctgttctgcaccagtctcctcttcctgctagcccatgtctccttccagatctgc
ctgtacactatccctgacctggaccatgcgctgggaaacaactgtagtttgtgggacaca
ctatcgaggcatgtcggtgtatccaggctgcccctggatgacccgtggagtgtggtgcgt
ctgctgacccctgacctgggggtgtttgtgatctctctggttaccctggtggtgtgtaac
cggctggtcaagaggagagatgacgtcactttcctgccggtagcctccgactccacacag
gggacagaggatgggtcagagacaaaggagggtgaagaggaggaggaagaggagggagat
gaggaaggcatttcgtcgcccagtgaacctggggatgacgtggtttctgcagcaactcgt
gccaagcagctggcggcccggctccgagtcacagcccagaaggtcctgagggacctgggc
cggatcctggccatcaccctgctggctctggctggcatcaccttaccctcggccttctct
gcaatctacttcctgcttttcatcggcgtgtgcacatggtgggcctgccactttcccatc
agccacctaggcttcaatgtgctgtgtgtgatggtgggctttttcacagcgggccacctg
gtgtgtctctacctgtaccagtgccccattgcccagggcatcttcccccctgccagcctg
tgggccagactgtttggcctcaaggatatcatcaaacctggcaactgctccgcctcctat
gacctcatccttaacacggagcatgattggccggtgtatgtcaaccccgggatcctgctt
ctcctgtccatcaccgtggcgacggtcctgaagatcagcagccaccatggatcggctgac
aaggatgaggagggtgcccagcttgtcaaaggaacagaggctggaggaggagaggatgtg
gaactgaagccctggtccgctcagagacaacccagccaggacgacactgagaacacactt
ctgtctatagagcacacaggagatcacgtcaccaatagctccagtcatcaggacttgggc
ccagggctcagtagtgcccctgatggacagcacggggaccaccctctgcagctgctgggt
agagtggtcatgcagcagagctacgtgtgtgctctcatcgccatgatggtgtggagcatc
acctaccacagctggctgactttcgtgctgctgctgtgggcgtgtctgatctggatgcta
cgtgcgagacgccacttcgccacgctgtgctctcccttcatcctgctctacggcctggcc
ctctgcttcctccagtacgtctgggccatggacctgcagccggagctgccccgcaccgtg
ggcaccatgagccttaggcagctgggtctggaccgagcccagtacccctgcctccgcctg
ggggccatgctgctgtacacgctgacgttctggctgctcctacgccagtcagtgaaggac
aacttcagcaggaagaagggcaggtctgccccgctacaggaggtcaccactggagagggg
agcgggcagaacgagtcggttctgaaggttgtgggcagactggtgatgagctgctatgcc
aagtactggatctacgtgtgtggaggcatgttcatcatggtcagcttcgctggcaagctg
gtgggctacaagatcatctacatgctgctcttcctgctttgcctctgtctctaccaggtg
tactactctctgtggaggaggctgctcaaggttttctggtggctggtggtggcctacacc
atgctggtccttatcaccatctataccttccagtttgaggacttccctgcctactggaag
aacttcaccggcttcactgaagagcagctggctgacatcggcctggagacctttaagctg
accgagttgttcaccagcatcctgatcccaggcttcttcctcctggcctgcatcctgcag
ctgcactacttccacaaaccctttatgaggatcacagacctagaccacgtcacgcccata
cacaggaagaggaacaggcacagaccagaggtccgccgctgtgatgatggggctgtgttt
gaggaggatgacctggtgacggatctgagggatgacgaatcagaggaggatgagatgatg
cccagtaagtggggtttggtgatgaacaggctgatagttctgttcaggaagttctctgac
acgctgacccagatccaagtgttaatctggagggtcctggagctgcacatcctcaagatg
gtggcctttttcgtggtctgggtagctctgggagagccgtctgtgatgaacctggttctg
gtggtgctctgggcgtttgccatgccctacacccgcttccgccacatggcttgctgtctg
tccaccgtctgggtctgcatcatcattgtctgcaagatgctctaccagctcagcatcgtc
gaccctgtcgagtactccaacaactgcactgtgcccttggccaatgaaaccaatctgaaa
gatgctgaggtcctgaactccactctgtacagagagcctgtagacccagccaactggttt
ggcttcaggaaggatgccaccgtgctgggctatagcaagaaccacctgctggtgctgatg
ctgctggtgtttgaggccacagtgaaccgccaccaggaccaccactacaggcagcagcag
aggtcccctcccctcatcccagccatcttcccccaggccaccagagacaccctggaccag
ggcctgctggcctgcatcaagtacctactcaactacagcttctacaagtttggcctggag
atctgctttctgatgatggtgaatgtgattggccagcggatgaacttcctagtcataatc
catagctgttggttggtggccatcatggtacggcgtcgccgggcggccatcgctcagatc
tggcccaagtactgcttgttcctcagcatcttcatgatctaccagtacatactgtgtgtg
ggcattccccctgcactctgtatagactacccctggcgatggaacacccccgtcataatc
aactcagcactcatcaaatggatctacctcccagacttctacaccatccccaactccaag
aacctcattgcggactttgtcctcctgatgtgtgcctcccagcagtggaaggtgtttgag
gatgagaagagggaggagtggatggttctggctggggagaacacagacgaccctaacccc
atggatgatcgacctttcaaccctgcccccaacttcatcaactgcaggtgttacctggac
atgagcaaggtgctggtgttccgtcacatgttctggtttgtcttgtcggtggtgtttgtg
accggggctaccaggatcagtgtgttcggcctgggctacctgctggcctgcttcttcttc
ctgctcttcggcaccaagctgctcaggaagccctcccgcacgcgcctggtcatgtgggac
tgcctcatcatctacaacgtggccgtaatcatctccaagaacatgctgtctatcttggcc
tgtgtgtttgtgttggagatgcagaaaagtttctgctgggtgatccaactcttcagtctg
gtctgcacagtcaagggttactatgaccctaagactgtgagcgataaggcgtgtactctg
cctgtagaggaggcaggcatcatctgggacagtatctgcttcttcttcctcctgctgcag
aggagagtgttcctcagctgctacttcctgcacgtgacagccgacctgcaggcctctgcc
cgccaagcctcccggggctttgagctgttcagggccagcattgtgaagaacatgcgcttc
caccaggaagtagagaagaagtccctctcgcagctcaagagatcgatggaacggatccgc
tccaaacaggagaagtgtaaagagggccgtcggaaatcggacaccaaggcggatccggca
tcagagccacagagggaaaagagaagccacaagcgtggcaagaagtggcaagagccctgg
ctggaccatgctaaagtgttgcattctgcggattactacctgtttgagtcggacagtgag
gaggaagacgaactgttttcagaagaaaaaaagcctcagaaacagactgcctttcagctg
gcgtaccgggcgtgggtgaccagcgccaaggcaacgctgagggaacgtcaggagagacag
aaagaacagaggaggctggaaagagaggagagacggcagaggaaacaggacagttctcca
gcatcaggtcatgaaggtagtcttgaatttgaagaaagcatttcacatgaagagatcgac
gacaatgacgaacttgatggagagggctcagggaaggcagacattgtgcagaggatcctg
gacgtcctcatgttgctgtgggtcgtgttcctggccatggtggatggcctaacagagtgg
ctcaacctcatcaccaagcagtacgtggacacctccaccgtgctgtgcaacgaacgctac
cacctcatacacaacgtcagccagggatctctgagggagcccatggaggatcagctgtcc
cagggcagcgagagccccactatggagacctgtctgggagacatagagggagacacggac
cacatgaatagaaccagtgccaccagtgggttggagctggtggagctgagcgagcgtgag
catcacagcggcaccacgctgtgttgttcagagcccactctggagcagctgggggtagag
ccagaaccacagcacaaaagccgctaccgccactccaggaccgccagcgagatgctcact
gaccggcagttctttgtggaggagctggtccagtgtagagagttctactcctctcagaac
cgcctgctgaagctgcagtttgccctatacaacctcctggctgccaactcagagctggtg
tgctacttcatcatcgtgctcaacaacatggtgacggcctctgtcatctcagtggtgctg
cccatcctcatcttcctctgggccatgctggccgtgccacgccccaccaagaagttctgg
atgaccgctattgtctacactgaggtcatggtggtggtgaagtacctgttccagtttggt
ttcttcccgtggaatagtgtatatgagctcacgctgaacgaggacaagcctttcttccca
cctcgtatcctgggcctggagaagacggataactacatccgctatgatctgctgcagctg
ctggctctcttcttccatcgctcactgctacagcggtatggcctgtgggaccaggaatgt
gctctggaggagaagccctcacggccatcagaggaggccaacaagaaggagggaggagag
ggggagggggtggaagtccatgttcatcccagcccaggacccagcctcatggacctggag
gaactcaaaccggacgaagaccagaaggccgaaccagagcctgaaccagagcctgaacca
gagcccagcaccagcttagtccccaccccagagccgccccccagcctgcctgtggaggga
cccaagaagaagggcagcatcatgcgcttccgcaagaaaaaactattaagcaaagaagcc
ttagatatcaaggctgagaaaaaggagcagaagaagaaacagaagggtaagcgtagagag
gcagccagtaagaagctgatagcagcgggagagaagatcaagcacctcaccatcacagct
gtgcagaatgtctacaagccgtgtcacgaattcttcagcgacatcttacatgcaccgtac
cgtgctgccactgatgtctacgccctcatgttcctcactgacgtggtggatttcatcatc
attgtctttggtttctgggcctttggaaaacactcggccgcagcagacattgcctcgacg
ctgtcagaggaccaggtgcccgaggccttcctggtgatgctgctcatccagttcagcacc
atgatcatcgaccgagccctctacctccgcaagaccgtcctgggcaagctcatcttccag
atcatcctggtgtttggcatccacctctggatgttcttcatcctgcctgctgtcactgag
aggatgttcagtcaaaactcggtggctcagctctggtacttcttcaagtgtatctacttt
gccctgtcggcctatcagatccgctgtggctaccccacccggatcctgggcaacttcctc
actaagaagttcaaccacctcaacctcttcctcttccaagggttccgcttggtgcctttc
ctggtggagctccgggcagtgatggactgggtgtggactgacaccactctgtccctctcc
aactggatgtgtgtggaagacatctacgccaacatcttcatcattaagtgcagccgtgag
acagagaagaaataccctcagcccaaaggccagaagaagaagaagatagtgaagtatggg
atgggaggactcatcatcttctttctcatctgcatcatctggttcccgctgctcttcatc
tcgttggtcagatcggtggtgggcgtggtcaatcaccctgtggatgtcacagtgaccgtc
aagctgggaggatatgagcccttgttcaccatgagtgtccagcagcagtccattcagtcc
ttcactgaggaggactacaacaaactcaccaccaacttctatgacaatgctagggctatg
cagttcatcaccctctacagctatgaggacatagtgacagctaagatcgagggcagctca
gggtcagtgtggaggatcagcccaccaagtcgacaggaggtggtcaaggagctgctgggc
agccctgtggacatgaccctacgcctggcctggactttccagagggaccttggcaagggt
ggcactgtggagcacacgtctgacaagtactccatcgatctggatccaggcaacccggtc
agagcagacctggcttccctgctagtggggaaccgcacagacccagtacgtgtgcctcac
atgttccccaactatatccgagcaccaaacggcgccgaggccaaaccagtcgaccagctg
tataaaggtgatgaggatggctaccaggatataacactgtctctgatgagggaccgctct
ctgaacagcacccgtggggcccaggagtggtgggacatcagcatcgccgactgtactccg
tccaaaggggcctgcggcgtcctgccgatggtcatcttcaatgacaaagtcagccccccc
agtctaggtttcctggcaggatatgggatcatggggctgtatgtgtctgtggtgctggtg
attgggaagtttgtgaggggcttcttcagtgagatctctcactccattatgtttgaggag
ctgccctgtgttaaccgtatcctcaagctgtgcacagacatcttcttggtcagggagaca
ggagagctagagctggaagaggagctctactccaaactcatcttcctctaccgctcacca
gagactatgattaagtggacaagagacaagctatcaagtgacaatcgctag
DBGET
integrated database retrieval system
