Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139411390
Help
Entry
139411390 CDS
T10872
Name
(RefSeq) E3 ubiquitin-protein ligase RNF166 isoform X1
KO
K17044
E3 ubiquitin-protein ligase RNF166 [EC:
2.3.2.27
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ocla04121
]
139411390
Enzymes [BR:
ocla01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
139411390
Ubiquitin system [BR:
ocla04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
139411390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-Di19
zf_C2HC_14
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_2
zf-RING_5
zf-RING_6
zf-C3HC4_3
U-box
DZR_2
zf-C3HC4_4
zf-RING_4
zf-rbx1
zf-Nse
UIM
DUF7577
zf-Sec23_Sec24
Motif
Other DBs
NCBI-GeneID:
139411390
NCBI-ProteinID:
XP_071013789
LinkDB
All DBs
Position
6:complement(61128365..61149616)
Genome browser
AA seq
243 aa
AA seq
DB search
MMAMFRSFVSATHQLRQHQQNGAAAAATGESLESQFSCPICLEVYHKPVTIGSCAHTFCG
ECLQPCLQVTSPLCPLCRMPFDPKKVDKSSSVEKQLSNYKAPCRGCSKKVSLVKMRSHIS
SCAKVQEQMANCPKFVPVVPTSQPIPSNIPNRSTFSCPFCGARNLDQQELVKHCMENHRN
DPNKVVCPVCSAMPWGDPSYKSSNFLQHLLHRHKFSYDTFVDYSIDEESSLQAAMALSCQ
IKC
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atgatggcgatgtttcgcagttttgtttcggctactcatcagctcaggcagcaccaacaa
aacggggcagctgcggctgccactggcgagagcctcgagagccagttctcctgcccaatt
tgcctggaggtgtatcataaacctgtcaccattggaagctgtgcccacacgttctgtggg
gagtgtctgcagccctgtctccaggtcacctctcccctctgccctctgtgccgcatgcct
tttgacccaaagaaggtggacaagtcctccagtgtggagaaacagctgtccaactacaag
gccccctgtcggggctgcagtaagaaggtgtctctggtcaaaatgaggtcacacatctcc
tcttgcgcgaaggtccaggagcagatggccaactgcccaaagtttgtgcctgtggtcccc
acttcacagcccattcccagcaatattccaaaccgctccaccttttcatgcccattctgt
ggagcccgcaatctggatcaacaggagctggtcaaacactgtatggagaaccaccgcaat
gatcccaacaaagtggtgtgtcctgtatgttcagccatgccttggggggaccccagctac
aagagctccaacttcctccagcacctcctccaccggcacaagttctcctacgacacgttt
gtggactacagcattgacgaggagtcatcactgcaggcagccatggccctgtcctgtcaa
atcaaatgttaa
DBGET
integrated database retrieval system
