Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139411483
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Entry
139411483 CDS
T10872
Name
(RefSeq) DNA-binding protein RFX7-like isoform X1
KO
K09175
DNA-binding protein RFX7
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139411483
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Other basic domains
RF-X
139411483
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFX_DNA_binding
RFX5_N
Pox_D5
Motif
Other DBs
NCBI-GeneID:
139411483
NCBI-ProteinID:
XP_071014016
LinkDB
All DBs
Position
6:66956813..66996095
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AA seq
1454 aa
AA seq
DB search
MTEDQQQHDQLPKLGSGISTLPSLVPGLQGTEANALQLKIKNSICKSVQSKVDNILKDVE
TFTDIEKLYLYLKLPSGPSNSEKRTERGSASPGELSCSDQSSMSSSRTQQMHAFNWIRNH
LEEHPETSLPKQEVYDEYKSYCDNLCYHPLSAADFGKIMKNVFPNMKARRLGMRGKSKYC
YSGLRKKAFVHMPSLPNLELHKTGDGCEVLEASGQLCSAEEEVRSAACGLVCEWAQKVLS
RQFDAVEDLARFLLNSHYIGTKSVAALTVMTGTPTGVKTPLPSSAFAPTAEAHSFQSQVK
TLPSPSIDAKQQLQRKIQKKQQEQMLHSPLPGEAQARRADGGTPGVGSITCRSPALLSPH
PTIGIMVAAVPSPITVQRSRQLMSPSPVGTSEGKILPVNFQVVTQSMQPVKCPKTPQNIP
ASPVGDRSARHRYAQILPKPSATSAITLRSPPTLLITNSPIKTVMQPTPHISSVNLVKMT
TISLAPNCSTTTTLTNTTLRPASAGMGSTVALEESRPSPRARSGSAAPILSPLARSGRAT
TTPTIDIKMMEGEAISEGSPVLGASRLTMAQEATGGQRAGGAVPRAASVPTPHTKGSLGL
EAMAGTKCNVKSSLSNNPVAATTGSNNNTNNESTLYLTVSNQNTSTTLSPNGGTVATSLI
ASKSPRKRPGIGPEFYPTPVKRVFISQQPLGGSDGYRHGIGAGVKKLPRAGTPVRPESAP
AIGKVTVKLNSTVPTRILSLSDSPIGTRGFQTVVKPQNSVQRRDTPTTMDTSSIGNVSAP
AGHARIQHQQHMTGNMQSMPNSSALLEQSAVSDLRNTMWVGGQLEGGKQPQQQAYAQQIT
DHKQASTPVMEPLAMMGQAPDSSQLSMQTNMDYFHFNDDDMTQDSIVEELVQMEEQMKLN
SSLQAFGADVTVQGHQSVIQGNMMSSNQTVTPYYQSVHSSTTPVHTPTPTPTPTSELMGG
GQGLTRESPCSRMAPTTPVDSALGSSRHTPIGTPHSNCSGSVPPSPVECRNPFAFTPINS
SITGYHDGSIVSSSPVKPMQRPMATHPDKAKLEWMNNGYNNSGGNSINGISILPSYQDLV
DDHFRKPHAFAIPGQSYQSQTRHYGRLTPISPVQQQAASMANLNKQEGFAVPAPLDNKAT
STSSAGGTFRCRSVSPAVRQRNLSGNQGLQNIPRTVVSPFTSPVIPEMINIFANSHGDVS
VSSMAQRSQSVPVNVMMQTEVLPMQGQTNSKKITNVLLSKMDGDSDDAVRGLGINNLPSN
YTARMNLTQILETTPSFPSSANYQTLTSNAPNAYEFQKPGYLMKNSRNEQMSLSAGDSQA
QSATGEEQHQQSQPMLLAQKLQQQQLDFSTTVKDLLADGSLTPGNRLVRQVSELNAVGSD
FRLTSDLSSSINDLNNLDTNLLFDPNQQQGQYEDSTLEELKNDPLFQQICSETANSNGFD
WLESKDQPTVGLMG
NT seq
4365 nt
NT seq
+upstream
nt +downstream
nt
atgactgaggatcaacaacaacatgatcagctcccgaagctgggctctggaataagcacc
ttaccatccctagttcctggactgcaagggactgaggccaatgcgttgcagctcaaaata
aagaattccatctgtaaatctgtacagtcaaaggtggacaatattttgaaagatgtggag
acgtttacagacatcgagaaactctacctctaccttaagttgccttctggtcccagcaac
agtgaaaaaaggactgagagagggtctgccagtcctggagaactgtcatgcagtgatcag
agctccatgtcatcaagccgcactcagcagatgcacgcgttcaactggatccgcaatcac
ctagaggaacacccagaaacctctctgccaaaacaggaggtctatgacgagtacaagagc
tattgtgacaatctctgctaccacccattgagtgcggcggactttggaaagatcatgaaa
aatgtatttccaaacatgaaggcccgtcgacttggcatgagaggcaaatcaaaatactgc
tatagtggactgaggaagaaagcctttgtccacatgccatctttaccgaacctggagtta
cataaaacaggggacgggtgtgaggtgctggaggcctcaggtcagctgtgcagtgcggag
gaagaggtgcgctctgcggcctgtggcctggtgtgtgagtgggcccagaaggtgctgagt
cgccagtttgatgctgtggaggacctggctcgcttcctcctcaacagccactacatcggc
accaaatctgtggcagccctcacggtcatgactggtacaccaacaggagttaaaacgcca
ctcccatcctcagcatttgcacccacagctgaagcccactccttccagtcccaagtgaag
accctgccctctccctccatcgatgccaagcagcagctccagcggaagatccagaagaag
cagcaggagcagatgctgcactcccccctccccggagaggctcaggccaggcgggctgac
gggggcacgcctggggtcggctccattacctgtagaagcccagccctgctctccccacat
cccaccattggcattatggtagctgcagtccccagccccatcacggtacaaaggagcagg
cagctgatgtcccccagtcctgtgggaacttcggagggcaagattctgcctgtcaacttc
caagtggtgacccagtcaatgcagcctgtcaagtgtcccaagacccctcagaatatccca
gccagccctgtgggggaccgctctgcccggcaccggtatgcccagatcctgcctaaaccc
tcagccaccagcgccatcaccctgcgctcgccccccaccctgctcatcaccaacagcccc
atcaagaccgtgatgcagcccacaccccacatcagctctgtcaacttggtcaagatgact
accatatccctggctcccaactgcagtactacaaccaccctaaccaacaccaccttaagg
cctgcctctgctggcatgggcagcactgtagccctggaggagagcagacccagcccacgg
gccaggagtggctctgcggcccccatcctgtcccccttagccaggtcaggccgggccacc
accacccctaccatcgacatcaagatgatggagggtgaagccataagtgagggcagtccg
gtcctgggtgctagcaggcttactatggctcaggaagctacaggggggcagagggctgga
ggagctgtaccaagggctgccagtgtgcccacgcctcacactaaaggctccctgggactg
gaggcaatggctggaaccaaatgcaacgtaaagtcctctttgagcaacaaccctgtggca
gctacaactggtagcaataataacaccaataacgaaagcactttgtatttgacggtctcc
aatcagaataccagcaccactctgtcacccaatggcggcactgttgccacatcactcatc
gcctccaagagccccaggaagcgcccaggcatcggcccagagttttatcccacgcctgtc
aaaagggtcttcatctcccagcagcctcttgggggttccgatggttacagacatgggatt
ggtgcaggagtgaagaaactccccagggcaggaaccccggtcagacctgaaagtgcacca
gccatcggtaaagttactgtgaaactgaactccactgtcccaactcgaatcctgtcactc
tctgattcccctatcggaaccagaggcttccagactgttgtcaagccacagaactccgtg
cagagaagagacactccgaccaccatggacactagtagcatcggcaacgttagtgccccg
gctggtcatgcacgaattcagcaccagcagcacatgacgggtaacatgcaatccatgccc
aacagctctgccctactggagcagtctgctgtgagtgacctaaggaacaccatgtgggtc
gggggccagctggagggaggtaaacaaccgcagcagcaggcctacgcccagcagatcaca
gaccacaagcaggcatccacaccggtcatggagcccctggccatgatgggccaggcccca
gactctagccagctctccatgcagacaaacatggactacttccatttcaatgatgacgat
atgacccaggacagcattgtggaggagctggtgcagatggaggagcagatgaagctcaac
agcagtctgcaggccttcggagctgatgtgacggtgcaaggccatcagtctgtaatacag
ggcaacatgatgtcctccaaccagacagtgaccccttactaccaatcagtacacagcagc
accacccctgtccacacccccaccccgactcccacacccacctctgagttgatgggagga
ggccagggcttgaccagggagagtccctgctcccgcatggcccctaccaccccggtggac
agtgccctggggagcagccgacacacccccatcggcactccacactccaactgcagcggc
agcgtgccccccagccctgtggagtgcaggaacccctttgccttcactcccattaactcc
agcattacaggctaccacgacggcagcattgtctccagtagccccgtcaagcccatgcag
aggcccatggctactcacccagacaaggccaaactggagtggatgaacaatggttacaac
aacagcggggggaactccatcaacggcatcagtatcctccccagctatcaggacctggtt
gacgaccacttccggaagccccatgccttcgccatccctggccagtcctatcagtctcag
acgcggcactacggccgcctgacacccatctctccggtgcagcagcaggcagccagtatg
gccaacctgaacaagcaggagggcttcgctgtgcccgcccctctggacaacaaggccacc
agcacatcctcagcaggcgggaccttccgctgtcgtagtgtgagccctgccgtgcgacag
cgaaacctgagtggcaaccagggcctgcagaacatcccccgaacagtagtatccccgttc
acctcccccgtgatccccgagatgatcaacatcttcgccaacagccatggggacgtcagc
gtcagcagcatggcacagaggagccagtctgtgcctgtcaatgtgatgatgcagacagag
gtgctgcccatgcagggccagaccaacagcaaaaagatcaccaacgtgctcctgagcaag
atggacggggacagtgacgacgcggtgcggggcctgggcatcaacaacctgccgtccaac
tacacagcccgcatgaacctcacccagatcttagagaccacgcccagcttccccagcagt
gccaactaccagactctgacttccaacgctccgaatgcgtacgagtttcagaagccaggt
tacctcatgaagaactctaggaacgaacagatgagtctctcagcaggtgacagccaagca
caatcagctactggagaagagcagcatcagcagagccagcctatgctgctggcccagaaa
cttcaacagcagcagctagatttcagcaccactgttaaagacctcttagcggacggcagc
cttactcctggcaatcggctcgtgagacaggtgtcagaactcaacgctgtggggtctgat
tttcgactgacctctgatctttccagtagcatcaatgacctgaacaatttggacacaaac
cttctgtttgaccccaatcagcagcagggacaatatgaagactctacactggaggaactg
aagaatgatccgctgttccagcagatttgcagcgagactgcaaattccaatggatttgat
tggctggaaagtaaagaccagcccacagtcgggttaatgggttaa
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