Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139411485
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Entry
139411485 CDS
T10872
Name
(RefSeq) E3 ubiquitin-protein ligase NEDD4-like isoform X1
KO
K10591
E3 ubiquitin-protein ligase NEDD4 [EC:
2.3.2.26
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04120
Ubiquitin mediated proteolysis
ocla04144
Endocytosis
ocla04530
Tight junction
Brite
Enzymes [BR:
ocla01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
139411485
Membrane trafficking [BR:
ocla04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
139411485
Ubiquitin system [BR:
ocla04121
]
Ubiquitin ligases (E3)
HECT type E3
139411485
Mitochondrial biogenesis [BR:
ocla03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Morphogenesis factors
139411485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139411485
NCBI-ProteinID:
XP_071014021
LinkDB
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Position
6:67005377..67053848
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AA seq
945 aa
AA seq
DB search
MLLESTYIGYGAEDMSMAALPEVRGLQTDENEARILRVKVIAGIGLAKKDILGASDPYTR
VSLYDPVNGELTSLQTKTIKKTLDPKWNEELFFRVHPRKHRLLLEVFDENRLTRDDFLGQ
VDVPLHQIPTENPNIERPYTFKDFLLHPRSHKSRVKGHLRLKMTYLPKNNSEDAAEQTED
MDPSWEFLEGQDMSGPRHNHLLPAMPPGWEERQDNLGRTYYVNHETRTTQWHRPIVQDSQ
VEAEQRQNIHMEAQHAFTARRQISDQEDSNDRQQESTESWEIITEDESTLYNSQRSPPPP
HSPLEFHSFCDELSRLQALGATSGNRRTSLQLQGPSSHSSHSSRRGSAQTLTVEEHPVHP
VASHSSHSSRRGSAQTLTVEEHPVHPVLLATSAGLPPGWEEKQDSKSRPYYVNHNSRITT
WTRPLIQITSDAAAQAVLSQNATVYQPPMLSPEGSPQHSPGSQRECGFMPAGWEVRNAPN
GKPFFIDHNTKTTSWEDPRLKIPVHMRRRPSLDPTDLGPMPPGWEERVHSDGRIFYIDHN
TKNTQWDDPRLQNSAITGPAVPYSRDYKQKYEYFRKKLKKPADIPNRFEMKLRRNTVLED
SYRRILSIKRADFLKARLWVEFEGEKGLDYGGVAREWFFLISKEMFNPYYGLFEYSATDN
YTLQINPNSGLCNEDHLSYFKFIGRVAGMAVYHGKLLDAFFIRPFYKMMLQKPITLQDME
SVDSEYFNSLKWILENDPIDLDLRFTIDEELFGQTHQHELKPGGSEIVVTDDNKKEYIHL
VMQWRFVNRILKQMTAFKEGFYELIPQDLIKIFDENELELLMCGLGDVDVNDWRENTKYK
NGYCPNQPVILWFWKTVLLMDAEKRIRLLQFVTGTSRVPMNGFAELYGSNGPQLFTIEQW
GTRDKLPRAHTCFNRLDLPPYESFEELREKLHIAIENAQGFDGVD
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
atgttacttgaatcgacctatataggctacggcgctgaggatatgagtatggcggcactt
cccgaggtccgtggacttcagactgatgagaatgaggctagaattctgagagtgaaagtc
atagctggaattggtttggccaagaaagatatccttggagccagtgatccatatacaaga
gtgtccctttatgaccctgtcaatggagaactaacaagtcttcagactaaaacaattaaa
aagacattggacccgaagtggaatgaggaattatttttcagggttcatcccaggaagcat
cggctgttgctggaggtgtttgatgagaatcgtctgacacgtgatgactttctggggcag
gtggatgtaccattacaccagataccgacagaaaatcctaacattgaaaggccatacaca
ttcaaggattttctacttcacccgagaagtcacaaatccagggtcaaaggtcatctccgt
ctgaagatgacctacctacccaaaaacaactcagaggatgctgcagaacagactgaagac
atggatcctagttgggagtttttagagggccaggacatgtccggtcccaggcacaaccac
ctgctgcctgcaatgccccctggctgggaggagaggcaggacaacctgggcaggacctac
tatgtcaaccacgaaaccaggaccacacagtggcacaggcccatagtacaagacagccag
gtagaggcagagcagaggcagaacatccacatggaggcgcagcacgccttcactgcccgc
aggcagatctccgaccaagaggactccaacgacagacaacaagagtcaactgagagttgg
gaaatcataacagaggatgagtccaccttgtacaacagccagcgctccccccctccaccc
cactcccccctggagtttcactccttctgtgacgagctcagtcgcctccaggccttgggt
gccacatccggcaaccgacgtacctccctccagctgcagggcccttccagtcattcaagt
cactccagtcgcagaggcagtgcccagactctgacagtagaggagcaccctgttcatcct
gtggccagtcattcaagtcactccagtcgcagaggcagtgcccagactctgacagtagag
gagcaccctgttcatcctgtgttgttagcaacctcagcagggctgcctccaggctgggag
gagaagcaggatagtaagagcagaccctactacgtcaatcacaacagcaggataaccact
tggacacggccactcatccagataacctcagacgcagcagcccaggctgttctgtcccag
aacgccactgtgtaccagccccccatgctctctcctgagggctccccccagcactccccc
ggctcacagagggagtgtggcttcatgcctgcaggctgggaggtccgcaatgcccccaac
ggaaaacccttcttcatcgaccacaacactaagaccacttcctgggaagaccccaggttg
aagattcctgtgcacatgaggaggagaccttcgctagacccaactgacctcgggccaatg
ccgcctggctgggaggagagggtccacagtgatgggaggatattctacatagatcacaac
acaaagaacacacagtgggatgaccccagactgcagaattcagccataactggaccagct
gtgccttactccagagactataaacagaagtatgaatacttccggaagaagctgaagaaa
ccggctgacatccccaaccgctttgagatgaagctcaggcggaacacagtgctagaggac
tcctacagacgaatcctgtcaatcaagagggccgacttcctgaaggcgcggctgtgggtg
gagtttgagggagagaagggcttggattacgggggcgtcgccagggagtggttcttccta
atctccaaggagatgttcaacccctattatgggctgtttgagtattctgccacggacaac
tacactctgcagatcaaccccaactcaggcctctgcaatgaggaccacctgtcctacttc
aagttcattggccgtgtggcaggcatggctgtctaccatggaaagctgctggacgccttc
ttcatcaggcctttctacaagatgatgttgcagaagcccattactctacaggacatggag
tctgtggacagtgagtacttcaactccctgaagtggatattggagaatgacccgatagac
ctggatctgaggttcaccatagacgaagagctctttggacagacacaccagcatgagctg
aagccaggaggatctgaaatagtagtcaccgatgacaacaagaaggaatacatccatctt
gtcatgcagtggaggttcgtgaacaggatactgaagcagatgactgcattcaaggaggga
ttctatgagttgataccccaggatctcatcaagatctttgacgagaatgagctggagctc
ctgatgtgtggcctgggagacgtggatgtgaacgactggagggagaacaccaagtacaag
aatggctactgtcccaaccagcctgtcatcctgtggttctggaagactgtgctgctgatg
gatgcagagaagcgtatccgcctgttgcagtttgtgactggcacctcccgggtcccaatg
aatggctttgcagagctctacgggtctaacggaccacagctgtttaccattgagcagtgg
ggaacacgagacaaactacctagagcccacacatgcttcaaccggctggatctgcctccc
tatgagtcatttgaggagctgagggagaagctacacatcgccatagagaatgcacaaggc
tttgatggagtggattag
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