Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139411492
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Entry
139411492 CDS
T10872
Name
(RefSeq) transcriptional repressor CTCF-like
KO
K23195
transcriptional repressor CTCF
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139411492
03036 Chromosome and associated proteins [BR:
ocla03036
]
139411492
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
139411492
Chromosome and associated proteins [BR:
ocla03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
139411492
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
zf-C2H2_jaz
zf-C2H2_REST
Zf-C2H2_ZNF451
zf-C2H2_7th_ZNF462
Zf-C2H2_ZNF451_C
zf-met
DUF7564
LIM
zf-C2HE
zf-C2H2_15
zf-C2H2_ZN142
DUF8106
Zn_ribbon_DUF2089
DUF7128
Motif
Other DBs
NCBI-GeneID:
139411492
NCBI-ProteinID:
XP_071014045
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All DBs
Position
6:complement(67246724..67258926)
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AA seq
769 aa
AA seq
DB search
MEGEVVSIETAQVEGLQDSGEGAELLQTAEASLMEGGVAPQDVTGNVEMMVMDTLDSTLD
PALLQMKTEVLEGGGTVTVTGGDEGQIITLQVVNMEGNMDQTSAALGLGQLQLVQVPVTT
ATVEELQASFVDASAGNTEAEPVICHTLPLPEGFQVVKVGANGEVETVEQEELQAAQDEL
QVIHGEEEEEEEAEPQVEDRTWSKDPDYQPTAGIRKGKKGKKSRLRYGEGERDMDVSVYD
FEEEQQEGMLSEVNAEKVVGNMKPPKPTKIKKKGVKKTFQCELCSYTCPRRSNLDRHMKS
HTDERPHKCHLCGRAFRTVTLLRNHLNTHTGTRPHKCQDCDMAFVTSGELVRHRRYKHTF
EKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPY
ECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSFMEMGR
KCRYCDAMFHERYALIQHQKSHKNEKRFKCDQCDYCCRQERHMIMHRRTHTGEKPYACSQ
CEKTFRQKQLLDMHFKRYHDPNFIPTAFVCSKCGKTFTRRNTMLRHAENCNGENTGDENG
TPPKKDRRGRKRKMRSRRDDDDDDTEPELDDIEEEEEELLPEIEVEQAPPVVPVPAPVGP
PAKRKRGRPPKAKPAPTAAIIRVEDEATGEVDDIIVKKEMKAEQASQEEEAVEDEEPAVE
VEHAKGEPANQVEESLQGEEVVQEMALSVTEGPPNGDLTPEMILSMMDR
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atggagggtgaagtcgtttccattgagaccgctcaggtcgagggtctccaggacagtggg
gagggagcagagctgctccagactgcagaggcttccctgatggaggggggtgtggcaccc
caagatgtgacggggaatgttgaaatgatggtgatggacaccctggactcgacccttgac
cctgccctgctacagatgaagactgaggtccttgaagggggcggaacagtgacggtcacc
gggggagacgagggacagatcatcaccctgcaggtggtgaacatggaggggaacatggat
cagacgagtgcagcgctggggcttggacagctgcagctggtgcaggtccctgtcactaca
gccaccgtggaagagctccaggccagcttcgttgacgcctcagcaggcaatactgaggct
gagccagtgatctgccacaccctccctctgcccgagggcttccaggtggtgaaggtgggg
gcgaatggagaggtggagacagttgagcaggaagaactgcaggcagcccaggatgagctc
caggtgatccatggggaggaggaggaggaggaggaagctgagccccaagtagaggaccgg
acatggtcaaaagacccagattaccaaccaactgctggcatccgcaaggggaagaagggc
aagaagagccgcctgcgttacggggagggggagcgagacatggacgtgtctgtgtatgac
tttgaggaggagcagcaggaggggatgctctctgaggtcaatgctgagaaggttgtgggc
aacatgaagccgcccaaacccactaagataaaaaagaaaggtgtgaagaagacgttccag
tgtgagctgtgtagctacacctgcccccggcgctctaacctggaccgccacatgaagagc
cacacagatgagaggccacacaaatgccatctgtgtgggagggccttcagaacggtcaca
ctgctgaggaaccacctcaacacacacacaggcactcgtcctcataaatgccaagattgt
gacatggcatttgtgaccagtggagagctggtgcgtcatcgtcgctacaaacacacattc
gagaaacccttcaagtgctccatgtgtgactacgctagtgtggaggtgagtaagctgaag
agacacatccgctcccatacaggcgagaggcccttccagtgcagtctgtgcagctacgcc
agccgagatacctacaaactgaagagacacatgaggacacactcaggtgagaagccatat
gagtgctacatctgccatgctcgtttcacgcagagcggcaccatgaagatgcacatcctg
cagaagcacacagagaatgtggccaaattccactgcccccactgtgacacagtcatcgcc
cgcaagagcgacctgggtgtgcacttgcggaagcagcattcgttcatggagatgggcagg
aagtgtcgttactgtgacgctatgttccacgagcgttacgcactcatccagcaccagaaa
tcccacaagaacgagaagcgcttcaagtgcgaccagtgtgactattgctgcagacaggag
cgtcacatgatcatgcacagacgcacacacacaggcgaaaagccgtacgcctgcagccaa
tgtgagaaaactttccggcagaagcagctgctagacatgcatttcaaacgttaccatgat
cccaacttcatccccactgccttcgtctgcagcaagtgtggcaagacctttactcgcagg
aacaccatgctgcgtcacgcagagaactgtaacggagagaacaccggcgatgagaacgga
accccgcccaagaaagaccgccgcggcaggaagaggaagatgcgctccagacgggatgac
gacgatgacgacaccgagcctgagctggatgacattgaggaagaggaggaggagctgcta
cctgagattgaggtggagcaggcaccaccggttgtccctgtccctgcccctgttggcccg
ccagccaagaggaaacgtggaagacctcccaaggccaaacctgccccaacggcggcaatc
atccgggtggaggatgaggccacaggcgaggtggatgacatcatcgtgaagaaagagatg
aaagccgagcaggcgagccaggaggaagaagctgtcgaggatgaggagccagcagtagag
gtggagcatgccaaaggagaacctgccaatcaggtagaagagtcactccagggggaggag
gtggtgcaggaaatggcactgtctgtcacagagggtccccccaacggtgacctcactcct
gaaatgattctcagtatgatggaccggtga
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