Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139411506
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Entry
139411506 CDS
T10872
Name
(RefSeq) transcription factor E2F4-like
KO
K04682
transcription factor E2F4/5
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04110
Cell cycle
ocla04218
Cellular senescence
ocla04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
139411506
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
139411506
04218 Cellular senescence
139411506
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139411506
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Helix-turn-helix
Fork head/winged helix cell cycle-controlling factors, E2F
139411506
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GFIT
Motif
Pfam:
E2F_CC-MB
E2F_TDP
HTH_Cmi2_C
Motif
Other DBs
NCBI-GeneID:
139411506
NCBI-ProteinID:
XP_071014068
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Position
6:67462889..67476536
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AA seq
373 aa
AA seq
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MELEVSRTELEGSDAPQSQRHERSLGLLTTKFVTLLQEAKDGVLDLKVAADTLAVRQKRR
IYDITNVLEGIGLIEKKSKNSIQWKGVGPGCNTREIGDRLVDLKSELEDLDMRESELDQQ
RVWVQQSIKNVTEDTHNSLLAYVNHEDICSCFKGDTLLAVRAPSGTQLEVPIPEAVQNGQ
RKYQIHLISAAGAIDVLLINKDPVNSTPVVLPVPPPEEMLQNTKSAAASADTTINTPTHT
FVKTTQSLATGKPKAHTAAKPSDNFSTEQSAPQPPSLDTRSLQSSASLDNNFTVFEPIKS
DSSDLLDFPKYFSDMFDPAKEMVSADLLEELMASEVFSPLLRLSPPPGDHDYIYNLDESE
GLCDLFDIPVLNL
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atggagctggaggtgagccgaacggagctggaaggttccgacgctccccagtctcagaga
cacgagaggagcctcggacttctcaccacgaagtttgttactttgctgcaggaagcgaag
gacggggtgctcgatctcaaagtagcagcagacaccctggccgtcagacagaagaggcgc
atctatgacatcaccaatgtactggagggcattggcctgatcgagaagaagtcaaagaat
agtattcagtggaagggagttgggccaggctgtaacacaagggagattggtgacaggctg
gttgacctgaagtcggagcttgaagatctggatatgagggaaagtgagctggaccagcag
agggtgtgggtccaacaaagcatcaagaatgtgaccgaggacacacacaatagtcttctg
gcctatgttaatcatgaggacatctgcagctgcttcaaaggtgataccctcttggcggtg
cgtgctccctctggtacgcagctggaggtgcccatacctgaagctgttcaaaacggtcag
aggaagtatcagatccatctgattagcgctgctggggccattgatgttctgctcatcaac
aaggacccagttaactcaacacctgtggtgctgccagtcccgccccctgaggaaatgctg
cagaacaccaagtctgctgcagcctctgcagacacaaccattaacacacccactcacaca
tttgtcaagaccacccagagtctggccaccggcaagcctaaagcacatacagcagctaag
ccatcagacaatttcagcactgaacaatctgcaccgcaaccaccatcattggacacccgg
tccctccagtcttctgcttcgttggacaacaacttcactgtctttgaaccaatcaaatcc
gattcatctgacttgctggatttccccaaatacttttctgacatgtttgaccctgctaaa
gagatggtgagtgcagatctactagaggaacttatggcttcagaagtgttttctccactc
ctccgcctttccccccccccgggtgaccatgactacatctataacctggatgagagcgag
ggcctctgcgatctctttgacatccccgtcctcaacctttga
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