Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139411519
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Entry
139411519 CDS
T10872
Name
(RefSeq) tubulin beta-3 chain-like
KO
K07375
tubulin beta
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04145
Phagosome
ocla04517
IgSF CAM signaling
ocla04540
Gap junction
ocla04814
Motor proteins
ocla05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
139411519
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
139411519
09144 Cellular community - eukaryotes
04540 Gap junction
139411519
09142 Cell motility
04814 Motor proteins
139411519
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
139411519
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ocla03036
]
139411519
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ocla04812
]
139411519
04147 Exosome [BR:
ocla04147
]
139411519
Chromosome and associated proteins [BR:
ocla03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
139411519
Cytoskeleton proteins [BR:
ocla04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
139411519
Exosome [BR:
ocla04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
139411519
Exosomal proteins of colorectal cancer cells
139411519
Exosomal proteins of bladder cancer cells
139411519
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Misat_Tub_SegII
Tubulin_3
Tubulin_2
TrmK
Motif
Other DBs
NCBI-GeneID:
139411519
NCBI-ProteinID:
XP_071014085
LinkDB
All DBs
Position
6:68088405..68093931
Genome browser
AA seq
449 aa
AA seq
DB search
MREIVHLQAGQCGNQIGAKFWEVISDEHGISPTGNYEGDSPLQLERISVYYNEASSSKYV
PRAILVDLEPGTMDSVRSGTYGQLFRPDNFIFGQSGAGNNWAKGHYTEGAELVDSVLDVV
RKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV
EPYNATLSIHQLLENTDETYCIDNEALYDICFRTLKLPTPTYGDLNHLVSATMSGVTTSF
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSACYNALSVPELTQQLFDAKNMM
AACDPRHGRYLTVAMVFRGQMSMKEVDEQMLAIQSKNSSYFVEWIPNNVKVAVCNIPPRG
LKMSATFIGNNTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
EYQQYQDATTEEEGEMYEEDEEESESQAR
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgagggaaatagttcaccttcaagccggccagtgtggcaaccagatcggagccaagttc
tgggaggtgatcagtgatgaacatggcatcagccctacagggaactatgagggcgactcc
ccactgcagctggagaggatcagtgtctactacaatgaggcctcatcctctaagtacgtc
cccagggccatcctagtagacctggagccaggaactatggacagtgttcgctctgggacc
tacggacaactcttcagaccagacaacttcatcttcggtcagagtggagctggtaacaac
tgggccaagggccactacacagagggagcagagctggtggactcagtactggacgtagtc
aggaaggaatgtgagaactgtgactgtctccagggcttccagctcacccactccctcgga
gggggcacaggctctggcatggggaccctgctcatcagcaagatccgggaagagtaccct
gaccgcatcatgaacaccttcagcgtggtgccctcccctaaagtatcagacacagtggtg
gagccctacaatgccaccctgtccatccatcagctgctggagaacacagacgaaacctac
tgcattgacaacgaggcgctttatgacatctgcttccgcacgctcaagctccccacgccc
acctacggagacctcaaccacctggtgtcggccaccatgagcggtgttactacctccttc
cgcttccccggccagctcaatgctgacctccgcaaactggctgtcaacatggtgcccttc
ccccgtctgcacttcttcatgcctggcttcgcccccctcacggcgcgtggcagtgcgtgc
tacaatgcactgtctgtgcctgagctcacccagcagttgtttgatgccaagaacatgatg
gccgcttgcgacccgcgtcacggacgctacctgaccgtggccatggtgttccgtggtcag
atgtccatgaaggaggtggacgaacagatgttggccatccagagtaagaacagcagctac
tttgttgaatggatccccaacaacgtcaaagtggccgtctgtaacatcccgccccgcggt
ctcaagatgtccgccaccttcatcgggaacaacacggccatccaggagctattcaagcgc
atctctgagcagttcaccgccatgtttcgccgcaaggcgttcctgcactggtataccgga
gagggcatggacgagatggagttcaccgaggcagagagcaacatgaacgacctggtgtca
gagtaccagcagtaccaggacgccaccaccgaggaggagggagagatgtatgaagaggat
gaggaagagtcagagagccaggcccggtga
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