KEGG T10872: 139411520

Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139411520

Entry

139411520         CDS       T10872

Name

(RefSeq) mitochondrial inner membrane m-AAA protease component AFG3L1-like

K08956

AFG3 family protein [EC:3.4.24.-]

Organism

ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)

Brite

KEGG Orthology (KO) [BR:ocla00001]
09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:ocla01002]
    139411520
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:ocla03110]
    139411520
Peptidases and inhibitors [BR:ocla01002]
Metallo peptidases
  Family M41: FtsH endopeptidase family
   139411520
Chaperones and folding catalysts [BR:ocla03110]
Other chaperones and cochaperones
  AAA proteases
   139411520

SSDB

Motif

Pfam:

Peptidase_M41 AAA AAA_lid_3 FtsH_ext AAA_22 AAA_5 AAA_16 RuvB_N TIP49 nSTAND3 AAA_2 AAA_14 IstB_IS21 AAA_28 Peptidase_M50B

Other DBs

NCBI-GeneID:

139411520

NCBI-ProteinID:

XP_071014086

LinkDB

Position

6:68120517..68138301

AA seq 801 aa
MVHMMGLLSVSVVPLRNGVQAWGRGCATIHAAFRYSNFSSLSKCSALKRINPMGLNQCTF
TLARLLSSKPPRGFEKFFPKSEDTPGVNKSSEETGDEKTKETESQGGGEEGQNESDERER
RRGGRKDESDWWTRFQNDFPWDEKTTRNVAIGFAGMASAFLYFYFRETGKEVSWKDFVNN
YLARGLVDRLEVVNKQYVRVIPVHGVNTSEVSYLWFNIGSVETFERNLELAQQEMGLDST
HRVPVIYGSESDGTFLMSILPTLLLVGFLLFTMRQGPMAGGRSGGRGNPFSMGESKAKVM
KDNIDVRFKDVAGCEEAKMEILEFVNFLKNPRQYQDLGAKIPKGAVLSGPPGTGKTLLAK
ATAGEANVPFITVNGSEFQEMFVGVGPARVRDMFAMARKNAPCILFIDEIDAVGRKRGRG
KFGGQSEQENTLNQLLVEMDGFNTSTNVVVLAGTNRSDILDPALMRPGRFDRQIYIGPPD
IKGRASIFQVHLRPLKLDSSIDSEALARKLAALTPGFTGADIANVCNEAALIAARYLNES
IIVKHFEQAIERVIGGLEKKTQVLQPLEKTTVAYHEAGHAVVGWYLEHADPLLKVSIIPR
GKGLGYAQYLPKEQYLFTREQLFDRMCMMLGGRVAEQVFFGKITTGAQDDLRKVTQSAYA
QVVQFGMSEVVGQVSFELPRQGEMVMEKPYSEPTAQLIDQEVRSLIDAAFQRTHQLITEK
RDVVEKVGRRLLEKEVLDKADMLELLGPRPYKEKSTYEEFVEGTGPMKEDTSLPEGLKNW
NKDRGMEEPPQEQQRKQALYL

NT seq 2406 nt +upstreamnt +downstreamnt
atggttcacatgatggggctgctttcagtgagtgttgtgcccctgcggaacggggtgcag
gcttggggcagaggctgcgccaccatccacgcagcttttcgctacagtaactttagctca
ttatcgaagtgttctgcattaaaacgaatcaatcccatgggattaaatcaatgcactttc
acattggctcgattgctcagttccaaacccccacgaggatttgagaagttcttcccaaag
agtgaggacactcctggagtgaacaagtcatctgaagagaccggagatgagaagaccaaa
gagacagaatctcagggcggaggagaagagggacaaaatgaaagtgatgagagagagagg
aggagaggcggaaggaaggatgaatcagactggtggacacgcttccagaatgatttcccc
tgggatgagaagaccacgcgcaatgtcgcgatcggattcgccggcatggcctctgcgttc
ctgtatttctacttccgagagactgggaaggaagtctcctggaaggactttgtaaataac
tacctggctagaggactggtggaccgtctggaggtagtcaacaaacagtatgtcagagtc
atcccagtgcatggagtcaacacatcagaggtgagctacctgtggttcaacatcggcagc
gtggagacgtttgaacgcaacctggagctggcccagcaggagatgggcctggactctaca
cacagagtaccggtgatctatggaagcgagagcgacggtactttcctgatgagcattctt
ccaaccctcttgctggttggcttcctgctcttcaccatgcgccagggaccaatggcagga
ggccgtagcggggggcggggcaaccccttcagcatgggggaatccaaggccaaggtcatg
aaggacaacattgatgtgagatttaaggatgtggcgggctgcgaagaggccaagatggag
atcctagagtttgttaacttcctgaagaacccccggcagtaccaggacctgggggccaag
attcccaagggtgcagtgttgtcgggtccccccggcacagggaagaccctgctagccaag
gccacagccggagaggccaatgtccccttcatcaccgtcaacggatctgagttccaggag
atgtttgttggcgtgggcccagccagggtgagggatatgtttgccatggcccgtaagaac
gctccctgcatcctgttcatcgatgagatagatgccgtgggcaggaagagaggcagaggg
aagtttgggggacagagtgagcaggagaacacactcaaccagctgctagtggagatggat
gggttcaacaccagcactaacgtggtcgtcttggctggaaccaaccgatcagacatcctg
gacccagcactgatgagacctgggcgcttcgacagacagatttacataggtccaccagac
ataaaaggcagagcatccatctttcaggtccatctgaggcctctgaagctggactccagt
atagactctgaagctttggccaggaaactagctgccctcacacctggcttcactggagct
gatattgccaacgtgtgtaatgaggcggccctgatagcagcacgctaccttaacgagtct
atcatcgtcaagcactttgagcaggcgatcgagagggtcatcggaggtctggagaagaag
acccaggtactacagccattagagaagaccactgtagcataccacgaggctggccatgct
gtggtgggctggtacctggaacatgctgaccctctgctcaaggtgtcaatcatcccccgg
gggaagggtttggggtatgctcagtacctccctaaggagcagtacctcttcacgcgggag
cagctgtttgacaggatgtgtatgatgctggggggacgtgtggcagagcaggtatttttt
gggaagatcaccacaggggcacaggatgacctccggaaggtcacgcagtctgcctacgca
caggtggttcagtttgggatgagtgaggtggtgggccaggtgtcttttgagctccccagg
cagggagagatggtgatggagaagccttacagcgagcccacggcccagctcatagaccag
gaggtccgctcactcatagacgctgccttccaacgcacacaccagctcatcactgagaag
agagatgtggtggagaaggtggggaggcgtctcctggagaaggaggttctggacaaggct
gatatgctggagctgctgggtcctcgcccctacaaggagaagtctacgtatgaggagttt
gtggaggggacggggcccatgaaggaggacacctcccttccagagggcctcaagaactgg
aacaaggaccgggggatggaagagcctccccaggagcagcaacgcaagcaggctctttac
ctgtag

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