Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139411531
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Entry
139411531 CDS
T10872
Name
(RefSeq) liprin-beta-2-like isoform X1
KO
K27096
liprin-beta
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139411531
Membrane trafficking [BR:
ocla04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
139411531
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
DUF16
Filament
Crescentin
Motif
Other DBs
NCBI-GeneID:
139411531
NCBI-ProteinID:
XP_071014099
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All DBs
Position
6:complement(69701521..69743262)
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AA seq
913 aa
AA seq
DB search
MRRQVPIDTAHTLLEWLEKGGVNQQSPVNGETNQERLTRLEGDKESLVLQVSVLTDQVEA
QGVKISDLESSLEEHQHKLNSTEEMLQQELLSRTSLESQKLNLMGEVSYLKLKLVDMEEK
QFHGVERQHKAESVVNLISELQEQMCRFQQEINCRIREKTGQADSSLQKACDTWSTDAQN
PDQGLACEGSPEEVHNSGLEEPPDVIPFSGVENSSSTSEEQCCCGSESVKLQELRLLKEK
VDYLEDQKSQYERRLKATKAELSDLQQLLLSKNAEIDSLHTQLLARPLSTETSEREDMYR
RRLNNKHQELQRLKTGMETLLVANDEKDRRIEELTLLLVQCRQFRDVATPRQAPPTILSI
SNESTPSSSSEEREHGVVMRTVPSSVLPENKKTEMSFSSSSPQLVSHLPAQKERELWTHP
RLLSSSMDNLQNGSSSKHVVVIPVEAEVSTENRPVDNRCQTLPVKASFPEHNGEGECSET
QSQRSPEGSEDGDSRKTEKMDDTSSSDLSPQSSGAESGQRTIGSPEHLKNNNSIRKLWGK
IRRTQSGGLQGEDLEPNQFRRGGLRATAGPRLTRTPESGSTVRDMNTPFSQWTREQVCGW
LEDYGLGQYVNLTRQWVDNGQTLLSARPQDFEKEMGINHPLHRKKLQLALRGFSTKALEK
SSELGHIWVTRWLDDIGLPQYKDQFHEGRVDGRMLQYLTVNDLLFLKVTSQLHHLSIKCA
IHVLHVNKFNPHCLRRRPGEERNPSPSEVIQWSNHRVMEWLRAVDLAEYAPNLRGSGVHG
GLIILELRFSSETLAMLLNIPPQKTLLRRHLATAFTALVGTQASLEKREYANATGHAPLT
TAAKVRPKKLGFTHFSHLRKRRPDDLGDYICPIDIGGLSAMNGVSHRPYAGVRGLSPILD
RVPERREQVGPKS
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atgaggagacaggtccccatagacacagcacacaccctgttagagtggctggagaaggga
ggggtaaaccagcagtcccctgtgaacggtgagactaaccaagaacgattgacacgctta
gagggagacaaagagtcccttgtcctccaggtgagcgttctgacggaccaggtggaagct
cagggagtaaagatcagtgatctggaaagttctctggaggaacatcaacacaagctcaac
tctacagaagagatgctgcagcaggagctccttagcaggacgtcactggagagtcagaag
ttgaatctgatgggagaggtgtcctacctgaaactgaagctggtggacatggaggagaaa
cagtttcatggagtagagcggcagcacaaagcagagagtgtcgtaaacttgattagtgag
ctgcaggagcagatgtgtaggtttcagcaggagatcaattgcaggatccgggagaaaaca
gggcaggctgacagcagcctacagaaggcctgcgacacttggtccacggatgcccaaaac
ccagaccaggggctcgcctgtgagggtagcccagaggaggtacacaacagtgggctggag
gagcctcctgacgtgatcccattctcaggcgtggagaatagctccagtacttctgaggag
cagtgctgctgtggaagcgagagtgtcaaacttcaagagctcagacttctcaaggagaaa
gtagactatcttgaagaccagaagtcccagtatgagaggagactcaaagcaacaaaggca
gagctatcagacctccagcagctcctgctcagtaagaatgctgagatagacagcctgcac
acacagctcctggccagaccactgtccactgagacctcggagagagaggatatgtacagg
agaaggctcaacaacaagcaccaggagctccaaaggttaaagacggggatggagacgctg
ctggttgccaatgatgaaaaggaccggcgtattgaggagctcacactgctcttagtccag
tgcagacagttcagagacgttgcgactccaagacaagctccacccactatcctctcaata
tccaatgagagtactccatcgagcagcagtgaggaacgggagcatggagtggtgatgagg
acagttccttccagtgttctccctgagaacaaaaagactgagatgtccttcagcagttca
tccccacagcttgtgtcccacctgccagcccagaaggaaagagaactctggacgcatccc
cgacttttatcaagcagtatggacaacctacagaatggatcttcatcgaagcatgtagtg
gtgattcctgtagaggctgaagtgtctactgagaataggcctgtagataaccgatgccag
accctgccggtgaaggcctccttcccagagcataatggagagggagagtgcagtgagaca
cagagccagaggtctccagaggggagtgaagacggagactcaagaaagacagagaaaatg
gacgacacctcatcctctgatctttcaccccagtcttcaggggcggagtcaggtcaacgg
actattggctcaccagaacacttgaagaacaataacagtatcagaaagctctggggaaag
atcaggcggacccagtcagggggtctgcagggggaggacctggaaccaaaccagtttagg
agaggggggctgcgtgccacagcggggccaagactgacccggacccctgagtctggcagc
actgttcgggatatgaacacaccattcagccagtggaccagagagcaggtgtgtggttgg
ctggaggactatggtctgggccagtacgtcaacctgacccggcagtgggtcgacaacgga
cagacgctcctgtccgcaaggccacaggactttgagaaggaaatgggtatcaatcacccg
ctgcacaggaagaaattacagctggctctaagggggttcagtactaaagccctggagaag
tcctctgaactgggccacatctgggttacacgatggttggatgacataggccttcctcag
tacaaggaccagttccacgaggggcgagtggatggcaggatgcttcagtatctcaccgtg
aatgacctgcttttcctgaaggtgaccagtcagcttcatcacctcagtataaagtgtgct
atccacgtcctccacgtcaacaagttcaacccccactgcctccgacgaaggcctggagag
gagaggaacccctctccctcagaggtgatccaatggtccaaccatcgtgtgatggagtgg
cttcgggcggtggacctggctgagtatgcacccaacctacggggcagtggggtccatgga
ggtctcattattctggagctgcggttcagctctgagaccctggccatgctgctgaacatc
ccccctcagaagaccctgctccgccgccacctggccaccgccttcaccgccctggtgggg
acgcaggcctctctggagaaacgggagtatgccaacgccaccggccatgcacccctcact
accgccgccaaagtccggcccaagaagcttggtttcacccacttcagtcacctgaggaag
aggaggccggatgatttgggggactacatctgcccgatagacattgggggcctttcagcc
atgaatggggtttcccaccggccgtacgcaggggtccgaggccttagccccatcctggac
agagtgccagagaggcgggagcaggtggggcccaaaagctga
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