Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139411532
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Entry
139411532 CDS
T10872
Name
(RefSeq) stromal membrane-associated protein 1 isoform X1
KO
K12486
stromal membrane-associated protein
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
139411532
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139411532
Membrane trafficking [BR:
ocla04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
139411532
Endosome - Golgi transport
Arf GTPase associated proteins
139411532
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ArfGap
Motif
Other DBs
NCBI-GeneID:
139411532
NCBI-ProteinID:
XP_071014108
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Position
1:complement(70443346..70503993)
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AA seq
473 aa
AA seq
DB search
MSTRSEREKAQKLNEQHQAILSKMLREDDNKHCADCEAKGPRWASWNLGVFMCIRCAGIH
RNLGVHISRVKSVNLDQWTQEQIQSMVDMGNNKAKQLYEAHLPDTFRRPQTDQAVEFFIR
DKYERKKYYDQNGLKTASKSSDAAAFSTSPASQAAEKNRQEKEREKKKREKDPEKVNRPS
SSEKKKAELQTDSRANPRRTPEPAIDLLGLDAPAGGAATSSAAPVSDEDIFGPMVSNPLP
SSNNTQAVSSAAPGAPAVAASAGGSGGAAGPQANLDLFSEKNSSSTKTEEGAKKPLSKDS
ILSLYSNTTVSPQPAAPAAAMYMGQPPMQQFPSQPSGQPNFQTYPGVGGAMPPTTMTGGV
MPQGGGAMMGQNSGMMVGMAMPNGGYMSMQQGMMGPPGGAMPAGAGTPQMYAAMQQQQQQ
QGQWNVNQMTQQISGIAMSGGVAAPPGFVQPGAPMGGGVGPPSGQTLSTQLWK
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacgcggtcggagagagagaaagcccagaaactgaatgagcagcatcaggccatt
ctgtccaaaatgctccgagaggacgacaacaagcactgcgctgactgcgaggctaaaggt
ccgcgatgggcgtcgtggaacctgggggtcttcatgtgtatccgctgtgctggcatccac
aggaacctgggcgtccacatctccagagtcaaatctgtcaacctggaccaatggacccaa
gaacaaatccagagtatggtagacatggggaacaacaaggccaaacagctgtacgaagcc
cacctcccagacaccttcagacgtccacagaccgaccaagcagtagagttcttcatccgg
gataagtacgaaaggaagaaatactacgaccagaatggcctcaaaacagcttcaaagtct
tctgatgccgctgccttctctacctctcccgcctcacaggctgctgagaagaacagacag
gagaaggaacgagagaagaagaagagagaaaaggacccggagaaagtgaacagaccaagc
tcctctgagaagaagaaggcggagcttcagacagactccagagccaatcccaggaggacc
cccgagccggccatcgacctgctcggcctggatgcacctgcaggtggagctgcaaccagt
tctgctgcaccagtcagtgatgaggacatctttggtccaatggtgtccaaccctctgccc
tcttccaacaacactcaggcagtctccagtgcagccccaggcgccccagcagtagcggcg
tccgcggggggatcggggggtgctgctggcccccaggctaatctggacctcttcagtgag
aagaacagtagcagcaccaagacagaggagggggccaagaaacccctctccaaggactcc
atcctctccctctacagcaacaccacagtcagcccacagcctgctgccccagctgctgct
atgtatatgggccagcctccgatgcagcagttccccagccagccctccggacagcctaac
ttccagacttacccaggagtgggcggagctatgccacccacaaccatgacgggcggtgtt
atgccccagggaggaggagccatgatggggcagaactctggcatgatggtcggtatggcg
atgcccaacggcggttacatgagtatgcagcaaggcatgatggggcctccgggcggagct
atgccagcgggggcggggactccccagatgtacgccgccatgcagcagcagcaacaacag
cagggccagtggaatgtgaaccagatgacccagcagatatcgggcatcgccatgagtggt
ggtgtggcagcgccacccggctttgttcaaccaggtgctcccatgggtgggggggtgggt
cctccctcgggccagaccctcagtacccagctgtggaagtga
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