Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139411569
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Entry
139411569 CDS
T10872
Name
(RefSeq) coatomer subunit beta-like
KO
K17301
coatomer subunit beta
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139411569
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ocla04147
]
139411569
Membrane trafficking [BR:
ocla04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
139411569
Exosome [BR:
ocla04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
139411569
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Coatamer_beta_C
Coatomer_b_Cpla
HEAT_2
Cnd1
HEAT
HEAT_EZ
Arm
MMS19_N
Motif
Other DBs
NCBI-GeneID:
139411569
NCBI-ProteinID:
XP_071014203
LinkDB
All DBs
Position
6:72069881..72077085
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AA seq
953 aa
AA seq
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MTAAENVCYTLINVPNDSEPPSEVSLKADLEKGEIKAKTEALKKVIIMILNGEKLPGLLM
TIIRFVLPLQDHTIKKLLLVFWEIVPKTTPDGKLLQEMILVCDAYRKDLQHPNEFIRGST
LRFLCKLKESELLEPLMPAIRACLEHRHSYVRRNAVLAIYTIYRNFENLIPDAPELIHDF
LVNEKDASCKRNAFMMLIHADQDRALDYLSTCIDQVHTFGDILQLVIVELIYKVCHANPS
ERARFIRCIYNLLQSSSPAVKYEAAGTLVTLSSAPTAIKAAAQCYIDLIIKESDNNVKLI
VLDRLIELKEHPTHERVLQDLVMDILRVLSTPDLEVRKKTLQLALDLVSSRNVEELVIVL
KKEVIKTNNVTEHEDTDKFRQLLVRTLHSCSVRFPDMAANVIPVLMEFLSDTNEAAAADV
LEFVREAIQRFDNLRPLIIEKMLEVFHAIRTVKIYRGALWILGEYCSTKEDIQSVMTEVR
RSLGEIPIVENEIKKEAGEGKPEEEVSAAPAAKLVTEMGTYVTQSALSSSRPSKKEEDRP
PLRGFLMDGDFYVAASLATTLTKVALRYVTIVQDKKRQNSFVAESMLIMATILHLGKSSL
PKKPITDDDVDRISLCLKVLSECSPLMNNIFNKECRKSLSHMLTVRLEEEKLSQKKESEK
RNVLVQADDPISFMQLTAKNEASSKEDQFQLSLLAAMGTTLKKEANDPMASKLNKVTQLT
GFSDPVYAEAYVHVNQYDIVLDVLVVNQTNDTLQNCTLELATLGDLKLVEKPSPLTLAPH
DFANIKANVKVASTENGIIFGNIVYDVSGAASDRNCVVLSDIHIDIMDYIQPASCTDAEF
RQMWAEFEWENKVTVNTNIADLNEYLHHILSSTNMKCLTPEKALSGFCGFMAANLYARSI
FGEDALANVSIEKPIHLGPDAPVNGHIRIRAKSQGMALSLGDKINLSQKKTSV
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atgacagccgcagagaatgtttgttacactttgatcaatgttccaaatgactccgaacct
ccatcggaagtcagtctcaaagcagacttggaaaaaggagagatcaaggcaaagacagag
gccctgaagaaggtaatcatcatgatactgaatggagagaagctgccaggcctactgatg
accatcatccgatttgtcctcccacttcaagaccacaccattaaaaagcttctgctagtc
ttctgggagattgtccccaaaacgactccagatggcaagctgcttcaggagatgatcctt
gtctgtgatgcctacagaaaggacttgcagcaccccaacgagttcatccgtggatccacc
ctgcgcttcctgtgcaagttgaaggagtctgagctgctggagcccctcatgcccgccatc
cgcgcctgcctggagcaccgccacagctacgttcgccgcaatgctgtactggccatctac
accatctacaggaactttgaaaatcttatcccagatgcccctgagttgatccatgatttt
cttgtgaatgaaaaagatgccagctgcaagagaaatgctttcatgatgctcattcacgca
gaccaggacagagctctggattacctcagcacctgcattgatcaagtgcatacatttgga
gatattctccagttggtcattgtggagctgatttacaaggtgtgccacgcaaacccgtct
gagcgtgcccgcttcatccgctgcatctacaacctgttgcagtcctccagcccagctgtc
aagtacgaggcagctggcactcttgtcacgctgtccagcgcacccactgccatcaaggct
gctgcccagtgctacatcgacctgatcatcaaggagagtgacaacaacgtgaagctgatc
gtcctggatcgtctgatagagctgaaggagcatcccactcatgaacgtgttctccaggac
ctggtgatggacattctgcgtgttttgagcacgcctgacctcgaggtccggaagaagacc
ctgcagctggccttggacctagtctcatcccggaacgtagaggagttggtgatagttctg
aagaaggaggtgattaagaccaacaatgtgacggagcatgaggacactgataaattcagg
cagctgctggtgcgcaccctccactcatgcagtgtacgcttccctgacatggcggccaat
gtcattcctgtgctgatggagttcctgagtgacactaatgaggcagctgcggctgatgtg
ctggagtttgtgagggaggccattcagaggttcgacaacctgaggcccctcatcatcgag
aagatgctggaagtcttccacgccatcaggactgtcaagatctacagaggagcgctttgg
atcctgggagaatactgcagcactaaagaggacattcagagtgtgatgacagaagtgcgc
aggtcgcttggagagattcccatagtagagaacgagatcaagaaagaggctggggagggg
aagccggaagaagaggtgagcgcagcgccagcagccaaactggtgaccgagatgggcacc
tacgtcacacagagcgccctcagctcctcccgtccctcaaagaaggaagaggacaggcct
cctctcaggggcttcttgatggacggagacttctatgtggcagcctctttagccacaacc
ctgaccaaagtggccctgcgatatgtcaccatagttcaagacaaaaagagacagaattcc
tttgtggctgagtctatgctgatcatggccaccatcctccacttgggcaagtcctctctg
cccaagaagcccatcacagacgacgatgtggaccgcatctcgctgtgcctcaaggtgctg
tccgagtgttcgcccctcatgaacaacatctttaacaaggagtgccgcaagtccctgtct
cacatgctcactgtcaggctggaggaggagaagctatctcagaagaaagagtcagagaag
cggaacgtgctggtgcaggcagacgaccccatttcctttatgcaactgacggccaagaac
gaggcgtcctccaaggaggaccagttccagctcagtttactggctgccatgggaaccact
cttaaaaaggaggctaacgaccccatggcctccaaactcaacaaggttacccagctgact
ggtttctcagacccagtctatgctgaggcctatgtccatgtcaaccagtatgacattgtg
ctggacgtgctggtcgtcaaccaaaccaacgacacccttcagaattgcaccctggagctg
gcgacattgggtgacctcaagctggttgagaagccttctcctctcactctggcaccccat
gactttgccaacatcaaggctaacgtcaaagtggcgtccacagagaatggcatcatattt
ggcaacatagtgtatgacgtatcaggagctgccagcgacaggaactgcgtggtcctcagt
gacatccacattgacatcatggactacatccagccagcctcgtgcacagatgcagagttc
agacagatgtgggccgagtttgagtgggagaataaggtgacagtgaacaccaacattgca
gacctgaacgagtacctccaccacatcctcagctccaccaacatgaagtgcctgacccca
gagaaggcactttctggcttctgtggcttcatggctgccaacctgtatgcccgctccatc
ttcggtgaagacgccctggccaacgtcagcattgagaagcccatccacctgggtcctgat
gcccctgtcaacggacacatccgcatccgggccaagagccagggtatggcattgagtctg
ggtgacaagatcaacctttcccagaaaaaaacatctgtataa
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