Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139411574
Help
Entry
139411574 CDS
T10872
Name
(RefSeq) DENN domain-containing protein 2B-like isoform X1
KO
K20161
DENN domain-containing protein 2
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139411574
Membrane trafficking [BR:
ocla04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
139411574
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
dDENN
uDENN
Exog_C
Motif
Other DBs
NCBI-GeneID:
139411574
NCBI-ProteinID:
XP_071014212
LinkDB
All DBs
Position
6:complement(72529205..72602547)
Genome browser
AA seq
1155 aa
AA seq
DB search
MQDNRVYRRVGGPRVTMTANKSSKAAPRARGANVPRDIPDRCQSASPPPILSATQGRCHA
PLSDSEDNRQHVRYVKTDGRLLGRAGCSSKTASLCSGASLSCDLPSQSRLTKSKSISCLD
NKLSIYKPSGGAPVRQEAQEEQKENQKQEDIPGGGGLSGGPLSWSTLSLGPSSKHGHKRT
LSLSRPVSGASSVAIRKKISEWECRRVALPRMSLCLEKRPVGERVGGSEGCPSLLPSPCS
EKTFDFKSIRRMSTAFSECSYPETEEEEAASDRECLGRFQKRPGKTDSSSLFLSSLSARK
ETSAVLNRIQKIEKVLKESPCQPPRYLSNCYAPDKTRQKCFMIGGVEDLDSRGTSKRSSI
CSVATEPDALPASDKLSRQRFSVSSTRSETESLEPPCQQTPEGMPVNPLPKPKRTFEYDA
NRNHKGMSPINGLPPDSASEESPPLLPTTPAPNMTRNLTKDGSSPKRLQDRESCEFEDAA
SLASSYPSSHTENGTVSTETRSSRPSSKSTLEENAYEDIVEKENPYEDVDLKRRSLGRKN
RLVPESSRTWTSQKLNSPPQLPSKPSSQSLRLSGPTDKKSHRASRLSKRHSHDDMLLLPP
HLGVSPSPCCLLDDSLSSASDTLASRRHRRIPKIVQRINSIYSTKRGKKRLKKLSLSNIE
TASLRDDNSESESDSDDRFKAHTQRLLKLQSMLRRAPSYRTLELQLIEWQERELFEYFVV
VSLKKKPTKNSFFPEVTYQFPKLERPTKLMREAEQRLKAIPQFCFPDAKDWTPVSEYSSE
TFSFMLTGEDGSRRFGYCRRLLPSGKGPRLPEVYCVISRLGCFHLFSKILDEVERRRGIS
AALVYPFMRSLMESPFPAPGKTIKVKTFLPGAGNEVIELRRPMDSRLEHVDFDSLFSCLS
VRQVVQVFASLLLERRVIFVADKLSTLSSCMHAVVALLYPFSWQHTFIPVLPASMVDIVC
CPTPFLVGLLSSSLPKLKDLPVEEALMVDLGTDRFLRQMDDEASLLPRKLQSALELTLEQ
RNDIINQDSDSESDEECNSLNSLVSEAFIRFFLETIGHYSLFLTQSERGERSFQREAFRK
SVASKSIRRFLGVFMESQMFAGFIQDRELRKCRAKGLFEQRVEQYLEELPDTEQSGVNKF
LKGLGSKMKFLHKKN
NT seq
3468 nt
NT seq
+upstream
nt +downstream
nt
atgcaagataatagagtgtataggcgtgtgggcggtccgagggtgacgatgactgccaac
aaaagttccaaggctgcaccccgagcaagaggggctaatgtgccccgggacatccccgac
aggtgccagtctgcgtccccaccccccattctctctgccacacaggggcggtgccacgcc
ccgctcagcgacagcgaggacaacaggcagcacgtcagatacgtcaaaacagacggcaga
ctcttgggccgggctggctgcagcagcaaaaccgctagcctctgcagtggagcctccctc
tcctgtgacttaccgtcccagagccgacttaccaagtccaagagcattagctgcctggac
aacaagctctccatctacaagccctctggtggggcaccggtgcgtcaggaggcccaggag
gagcagaaagagaaccagaaacaggaggacattccagggggaggtggactgagtggtggt
cccctgagctggagcaccctctccctgggaccttcatccaaacacggccacaagcgtacc
ctctctctcagccgccccgtgtcaggagcatcctctgtggccatccgtaagaagatctca
gaatgggagtgcaggagggtggctctgcctaggatgagcctgtgtctggagaagaggcct
gtaggtgagcgtgtgggcggcagcgagggctgccccagcctcctcccctcaccttgcagt
gagaagacctttgacttcaagagtatccggaggatgagtacggctttctcagagtgctcc
tacccagagacggaggaagaggaggcagcctcagacagggagtgcctgggccgcttccag
aagaggccaggaaagacagactcctcttccttattcctgagctccctgtctgctcggaag
gaaacgtctgctgtactcaatcggatacaaaagattgagaaggtgctgaaggagagcccc
tgccagccaccgcggtatcttagtaactgctatgcaccagacaaaacgagacagaagtgt
tttatgataggtggggttgaggacttggacagtaggggcaccagtaaacgcagcagtata
tgttctgtggccacagaaccagacgccctgccggcctctgataaactctccagacagagg
ttcagtgtgagctcaacccggtcagagaccgagagcctagagcccccctgtcaacagacc
ccggagggcatgccagtcaaccccctgcccaaaccaaaacgcacctttgagtacgacgcc
aaccgcaaccacaagggaatgtcgccaatcaacggactacctcctgacagtgcctctgag
gagtcaccacccctgctgcccaccacccccgcacccaacatgacgcgaaatctgacaaag
gatgggagctcccccaagagactccaggacagggagtcatgtgagtttgaggatgctgcc
agcctggcctcttcgtacccatcctctcacacagagaatggcactgtttccacagagacc
cgcagcagccggcccagctccaaaagcactttagaggagaacgcctatgaggacatagtg
gagaaggagaacccgtacgaggacgtggacctgaagaggaggagtttgggtcggaagaac
cgcttggtaccggaaagcagccggacctggacctcccagaaactcaactcacctcctcag
ctgccctctaagcccagtagccagtccctgcgcctctctggtcccacagacaagaagagt
caccgggcatcccgcctgtccaagcgacacagccatgatgacatgctgctgctgccgccc
catctgggggtctctccctccccctgctgcctgctggatgacagcctgagcagcgccagc
gacaccctggcctcccgtaggcaccggaggatccccaagattgtccagagaatcaactcc
atttactctaccaagagagggaagaagaggctgaagaagctgtccttgtcaaatattgag
acggcatctctgagagatgacaacagtgagagcgagagcgactctgatgacaggttcaaa
gcccacacccagaggctgctgaagctgcagtcaatgctgaggagggcccctagctaccgc
acactggagctgcagctgattgagtggcaggagagggagctgtttgagtactttgtggtg
gtgtccctcaagaagaagcccaccaaaaactccttctttcccgaagtcacctaccagttc
cccaagctagagaggcccaccaagctgatgagggaggcagagcagagactcaaagccatc
ccccagttctgctttccagatgccaaggactggaccccagtgtctgaatacagcagtgag
accttctcgttcatgttgactggagaggatggcagcaggaggtttgggtactgcaggcgt
ctgctgcctagtgggaaagggcctcgccttcctgaggtgtactgcgtcatcagccgactg
ggctgtttccacctgttctccaagatcctggatgaggtggagaggcggagggggatctct
gcagccctggtctaccccttcatgaggagtctgatggagtcacccttcccagcgccaggg
aagaccatcaaagtcaagaccttcctgcctggagcagggaatgaggtcattgagctgagg
cggcccatggactccagactagagcatgtagactttgacagtcttttcagctgcctgagc
gtgcgtcaggtggtgcaggtcttcgcctccctgctgctggagcgcagagtcatctttgtg
gctgataaactcagtaccctgtccagctgtatgcacgccgtggtggctctgctctatccc
ttctcctggcagcacaccttcatccctgtcctgcctgcctccatggtggacatcgtctgc
tgccccacgcccttcctagtggggctcctgtccagctcactgcccaaactcaaagacctg
cctgtggaagaggctttgatggtggacctgggaactgaccgctttctcagacagatggat
gatgaggcctcactgttgccacggaaactccagtctgctcttgagctaactctggagcag
aggaatgacatcatcaatcaggactctgacagcgagtcagacgaagagtgtaactccttg
aacagcctggtgtcggaggccttcatccgtttcttcctggaaaccatcggccactactcc
ctgttcctcacccagagcgagcgaggagaacgcagtttccagcgcgaggccttccgcaag
tctgtggcctccaagagcatccgtcgcttcctgggggtcttcatggagtcccagatgttt
gcggggttcatccaagaccgggagctgcggaaatgccgggccaaaggactctttgagcag
agggtggagcagtacctggaagagctaccagacacagagcagagtggagtgaacaagttc
cttaaagggctaggaagtaaaatgaagtttcttcacaaaaagaactga
DBGET
integrated database retrieval system
