Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139411588
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Entry
139411588 CDS
T10872
Name
(RefSeq) threonine--tRNA ligase 1, cytoplasmic-like
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
139411588
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ocla01007
]
139411588
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ocla03016
]
139411588
Enzymes [BR:
ocla01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
139411588
Amino acid related enzymes [BR:
ocla01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
139411588
Transfer RNA biogenesis [BR:
ocla03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
139411588
Prokaryotic type
139411588
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
TGS
tRNA_SAD
Motif
Other DBs
NCBI-GeneID:
139411588
NCBI-ProteinID:
XP_071014241
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Position
6:72995483..73018170
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AA seq
817 aa
AA seq
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MKANSNLKMAECMAARLTAQEEQIELLTREFSLLRDGLNGGPEVASILASSPELESLRSE
NEKLKFRLVHLRRGLQEELALEGQGKGGTNKGQEKTGKQQPKNRNYDNNKAATHETKPVV
DKEKPENNKKAAQGGVGGRELKPWPGYISERMQLYEELKKESDALLARRAADSQPITVEL
PDGCRVEGQAWVTTPYQLACGISQGLADNAVISRVNGDLWDLDRPLEKSCSLEILRFDND
DAQAVYWHSSAHILGEAMERFYGGCLCYGPPIENGFYYDMFLDGPQGVSSTEFEYLEALC
KSVVKEKQPFERLEVSKETLLKMFKYNKFKCRILNEKVTTPTTTVYRCGPLIDLCRGPHV
RHTGKIKALKIYKNSSTYWEGRSEMETLQRIYGISFPDSKMLKEWERFQEEARNRDHRKI
GKEQELFFFHDLSPGSCFFLPRGAYLYNTLTDFIREEYCRRGFQEVASPNIYNSKLWETS
GHWQHYSDNMFSFPVEQDVFALKPMNCPGHCLMFSHRPRSWRELPLRLADFGVLHRNELS
GTLTGLTRVRRFQQDDAHIFCTMEQIESEMKGCLDFLRCVYDVFGFSFQLHLSTRPEKYL
GDIAVWNQAEKQLENSLNEFGEPWKLNQGDGAFYGPKIDIKIKDAIGRYHQCATIQLDFQ
LPIRFNLTFVGKDGDDKGKPVIIHRAILGSVERMIAILTENYAGKWPLWLSPRQVMFVPV
NPTCEEYAKRMCKQFVEAGFMADADLDSSCLLNKKIRNAQLAQYNFILVVGEKEKLTNSV
NVRTRDNKVHGELSVSEVLARLTLLKESRCRNAEEEF
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcgaatagtaatttaaagatggcggagtgcatggcagcacgtttgaccgcgcaa
gaggagcagatagagctcctcactcgggaatttagcctcctacgagacgggttaaatggt
ggtccagaggtcgccagcattctcgccagttctccggagttggagagtttacggagcgag
aatgagaagctcaaatttcgtctcgtgcacctccgccggggtctccaggaagagctcgcc
ctggagggacagggcaaggggggcacaaacaaaggccaggagaagacagggaaacaacaa
ccaaagaaccgcaattatgataataataaggcagcaactcatgagactaaacctgttgtt
gataaggagaagccagagaacaacaagaaggcggcacagggaggggttggtggcagagag
ctgaaaccttggcctggctacatctcggagcgcatgcagctgtatgaggagctgaaaaag
gagagcgatgccctgctggccaggagagctgcagacagccagcccatcactgtggagctg
ccagatggatgcagggtggagggtcaggcctgggtcactaccccctaccagctggcctgt
ggcatcagtcagggcttagctgacaatgcagtgatttctcgggtgaacggggacctgtgg
gacctggatagacctctggagaagagctgctcactggagatcctgcgctttgacaatgac
gatgcccaggctgtgtactggcattccagtgctcacatccttggtgaggccatggagcgt
ttctatggaggctgtctgtgttatggaccacccattgagaatggcttctactatgacatg
ttcctcgatggaccccagggtgtgtcgagtacagagtttgagtacctggaggcgctgtgc
aagtctgtggtgaaggagaaacagcccttcgagaggctggaggtcagcaaggagacccta
ctgaagatgttcaagtacaacaaattcaagtgtcgcattctgaatgagaaagtcaccaca
cccactacaacagtctacagatgtgggcctctgattgacctgtgtcgtgggccccatgta
agacacacaggaaagattaaagccttgaagatctacaagaactcttctacgtactgggag
ggccgttcggaaatggagaccctgcagcgtatctacggcatctccttcccagactccaag
atgctgaaagagtgggaacgcttccaggaggaggctaggaacagagaccatcggaagatt
ggaaaggagcaggaactgttttttttccatgacctgagccctggcagctgcttcttcctc
ccgcgtggagcctacctatacaacacactcactgacttcatcagggaggaatactgtaga
agaggtttccaggaggtggcctctcctaacatctataacagtaagctgtgggagacttca
ggccactggcagcactacagcgacaacatgttctccttcccagtggagcaggacgtcttt
gcactgaagcccatgaactgtcctggacactgtctgatgttcagccacagacctcggtca
tggagggagctgcctctgagactggctgatttcggggtgctccataggaatgagctatca
gggacactgaccggccttacgagggtgcgccgcttccaacaggatgacgctcacatcttc
tgcaccatggaacagattgagtctgagatgaagggctgtctggacttcctccgctgtgtc
tatgatgtctttggcttctctttccagctgcacctttcaacccgtccagagaagtaccta
ggagacatcgctgtctggaaccaggctgagaagcaactggagaacagcctgaatgagttt
ggggaaccatggaaactaaaccaaggagacggtgctttctatgggcccaagattgacatt
aagatcaaagatgctattggccggtatcatcaatgtgcaaccattcagctggacttccag
cttcccatccgctttaacctgacctttgtggggaaggacggggatgacaaagggaagccg
gtcatcatccaccgggccattctgggctctgtggagaggatgatagccattctcactgag
aactacgctgggaaatggcccctctggctgtccccacgtcaggtgatgtttgtgcctgtc
aaccctacctgtgaagaatatgccaagaggatgtgtaaacagtttgtggaggccggattc
atggcagacgctgatctcgactccagttgcctcttaaacaagaagatccgcaacgcccag
ttagcccagtacaacttcatcctggtggtcggtgagaaagagaagctgactaacagcgtg
aacgtacgtacgagggacaacaaggttcatggagagctgtctgtctctgaggtgctggct
cgcctgaccctgttgaaagagtcacgctgccggaacgctgaggaggagttctga
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