Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139411611
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Entry
139411611 CDS
T10872
Name
(RefSeq) iroquois-class homeodomain protein irx-3-like isoform X1
KO
K24889
iroquois-class homeodomain protein IRX
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139411611
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
139411611
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
MRP-S32
Motif
Other DBs
NCBI-GeneID:
139411611
NCBI-ProteinID:
XP_071014293
LinkDB
All DBs
Position
6:complement(75410883..75414313)
Genome browser
AA seq
461 aa
AA seq
DB search
MSFPQLGYQYIRPIYPPERQGISNARAGTELSPSGALSNVLSTMYGSPFAAAAQGYGAFL
PYSNDISIFNQLGAQYELKDSPGVQGHPGFAHHHPAFYPYGQYQFGDPSRPKNATRESTS
TLKAWLSEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWTPRSRTD
EEGNVYNSDHEEGEEGDKREDEEEIDLENIDTENIENKDDLDDQDDLHADLKLDGRSDSE
ISDGYEDLQGPDQRFLKAVVKEGKDIHVDRGEHFHHHHHHSFEIKASQPNGEQVKLNPVS
INSPPSENNAAPAQKPKIWSLAETATTPDNPRKSPQMNGSNTVGPAAQTIISPHHRLISC
PVGKIQNWTNRAFSAHQLALLNSNHYLGLANQASANGLALYSRQQHQHTQDKSHSSDTAV
TERSSALEAEKKLLKTAFHPVHRRPQNQLEAAMVLSALASS
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcccgcagctgggatatcagtacatccgaccgatatacccaccggagcgccag
ggtatcagcaatgcccgagccgggacggagttgagcccgtccggggcactctcaaacgtt
ctctcaactatgtatggatcacctttcgccgcagcagcacagggctatggagcatttctg
ccctattcaaacgatatatcaattttcaatcaattgggtgctcagtatgagttgaaagac
agtccaggcgtacaaggacacccaggatttgcccaccatcacccagcgttttacccatat
ggccagtatcagtttggtgacccgtccagacccaaaaatgcgaccagggagagcacgagc
acactgaaggcctggctaagcgagcatcgtaagaacccctaccccaccaagggggagaag
atcatgctggccatcatcaccaaaatgaccctcacccaagtttccacctggttcgccaac
gccaggaggaggctaaagaaggagaacaagatgacctggactccccggagccgcacagac
gaagagggaaatgtttacaacagtgatcacgaggagggagaggaaggggacaagagggag
gatgaggaagagattgatttagaaaatatcgacacggaaaatatcgagaataaggacgac
ttggatgatcaggatgacctacacgctgatttaaaattagatggtagaagcgactctgag
atttcagacggctatgaggatttacaagggcccgatcagagatttctgaaggctgtagtg
aaggagggcaaagacattcacgtggaccggggcgagcacttccaccaccaccaccatcac
tcttttgaaattaaagcttcacaaccgaatggcgaacaagtgaaactgaatcctgtgtcc
atcaactcgcccccatcagaaaataacgcggccccggcccaaaagccaaagatttggtct
ttggcggagacagcaacaacccctgacaatccccgcaaatctccacaaatgaatggcagc
aacacagttgggcccgcggcccagaccataatcagccctcaccacagactcatctcttgt
cctgttggaaaaatccagaactggacaaaccgagctttttctgcccaccagctcgcatta
ctgaactctaaccattaccttggactggcgaaccaggcttcggctaacgggctcgccctc
tacagcaggcagcaacaccaacacacgcaggacaagagtcatagctcagacacagccgtc
acagagagatctagtgccttggaagcagagaaaaagttgttaaaaacagccttccaccca
gttcatagacggcctcagaatcaactcgaagcagccatggttctgtcagctctcgcctcc
tcctag
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