KEGG   Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139411625
Entry
139411625         CDS       T10872                                 
Name
(RefSeq) tropomyosin alpha-1 chain isoform X1
  KO
K10373  tropomyosin 1
Organism
ocla  Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04260  Cardiac muscle contraction
ocla04261  Adrenergic signaling in cardiomyocytes
ocla04814  Motor proteins
ocla04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:ocla00001]
 09140 Cellular Processes
  09142 Cell motility
   04814 Motor proteins
    139411625
   04820 Cytoskeleton in muscle cells
    139411625
 09150 Organismal Systems
  09153 Circulatory system
   04260 Cardiac muscle contraction
    139411625
   04261 Adrenergic signaling in cardiomyocytes
    139411625
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:ocla04812]
    139411625
   04147 Exosome [BR:ocla04147]
    139411625
Cytoskeleton proteins [BR:ocla04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Tropomyosins
     139411625
Exosome [BR:ocla04147]
 Exosomal proteins
  Exosomal proteins of microglial cells
   139411625
SSDB
Motif
Pfam: Tropomyosin Laminin_II CLZ DUF745 ATG16 Crescentin TMF_DNA_bd PUMA_CC Lebercilin DUF3450 CENP-F_leu_zip DUF16 MscS_porin Laminin_I EzrA DUF1664 FPP SlyX Fez1 XhlA
Other DBs
NCBI-GeneID: 139411625
NCBI-ProteinID: XP_071014315
LinkDB
Position
6:76675397..76687096
AA seq 284 aa
MDAIKKKMQMLKLDKENALDRAEGAEGDKKAAEDKSKQLEDDLVALQKKLKGTEDELDKY
SESLKDAQEKLELAEKKATDAEADVASLNRRIQLVEEELDRAQERLATALTKLEEAEKAA
DESERGMKVIENRASKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIIESDLERTE
ERAELSEGKCAELEEELKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLTDKLKEAETRAE
FAERSVAKLEKTIDDLEDELYAQKLKYKAISEELDHALNDMTSI
NT seq 855 nt   +upstreamnt  +downstreamnt
atggacgccatcaagaagaagatgcagatgcttaaactcgacaaggagaatgccctggac
agagctgagggagctgagggagacaagaaggcagcggaggacaagagcaaacagcttgag
gatgacctggtagcgctgcagaagaagctgaagggaaccgaggatgagttggacaagtac
tctgagtctcttaaggatgcccaggagaaacttgaactcgctgagaagaaagccacagac
gccgaggctgatgtagcttccctgaacagacgtatccaactggttgaggaggagttggat
cgtgctcaggagcgtctggccacagctctgaccaagctggaggaggctgagaaggctgct
gatgagagtgagagaggcatgaaggtgattgaaaacagagcatcgaaggatgaggagaag
atggagctgcaggagatccagctgaaggaggctaagcacatcgctgaggaggctgacagg
aaatacgaggaggtcgcccgtaagctggtcatcattgagagtgatctggaacgtacagag
gagcgtgctgagctctctgaaggcaaatgcgctgagcttgaggaagagttgaagacagtc
acaaacaacctgaagtctcttgaggctcaggcagagaagtactcacagaaggaggacaag
tacgaggaggagatcaaggttctcacagacaagctaaaggaggctgagacccgtgctgag
ttcgctgagaggtccgtggccaagcttgagaagaccattgatgatctggaggatgagttg
tatgcacagaagctaaagtacaaggccatcagcgaggagctggaccacgccctcaacgac
atgacctccatttaa

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