Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139411634
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Entry
139411634 CDS
T10872
Name
(RefSeq) protein unc-13 homolog C-like
KO
K15293
protein unc-13 A/B/C
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139411634
Membrane trafficking [BR:
ocla04131
]
SNARE
SNARE associated proteins
Syntaxin-binding proteins
139411634
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MUN
C2
C1_1
HSM3_C
DUF7653
Motif
Other DBs
NCBI-GeneID:
139411634
NCBI-ProteinID:
XP_071014330
LinkDB
All DBs
Position
6:77406626..77629973
Genome browser
AA seq
2539 aa
AA seq
DB search
MVSALLQTLSSYIVKICKGMFTKKLVNPTKKKESSDNKEPKLTTTDLRDQGNLTPTLSTT
LKTTVKNISKCSSARNISLELDDGKNDCSSLSPTFSYRVAIANGLPKNTLLLNNNESIFQ
EILSINSEYSDSLSEAKPVHRFDEQKSHTMPVRRNRKSLISLAPSDGSSEGERVERSSLH
TLRLGALRKLRKWKKSQECVSSDSEVSNWRKTLGIRSKSLDRAGRQQKSTSALEAGSSST
GCINQTQDVMEMIFKELQGISQIETELSELRGHVNALKNSIDEISSSVEVVQTEIEQLRT
GFVQSRRETRDIHDYIKQVSHQANKASLRFINVPEEKLEKTESLIYHILKDKMGFAEAHK
TLKIELAHRLGQQRECSNAKPRPIIVIFSTPSDRDLVLKKCYKLKGTGISVSTDSLTTHD
VKEKKDKGEMSSSQTYESMDIKVSAKDKAESDDWDSMDSDKELDELNRNKYAMVVSKPVH
KHKADKKRHGHHEHGSRSLDEAGYSASVHYADDSYDESDKASKPYYGDLTPGWLSQSDYS
TPKLSRSESDCSKLCQSYSEDFSESQYFSRPNGSSLLSSSDQELWQRKQEDMASSWYASQ
TLSQENPPYAEPNEAETTETIDSGVSNGLICMSGDRSHYSGSQLSLQGDLSPWKDWPHLE
QGADSGLDASTEQNLVSEVSSPFDPAAIPGFPENITKCQEVDLAFEGEETFMLDMVESTL
LDTAPLEITQLESARLGSAPPTTLYTAPIVAKEPVVTPPVHKPKAKETAKTLPKETSKAA
PKAKTPPKELAKTVPKEIAKTIPKEVAKTIPKEVAKTIPKEVSNTIYKVTSKPAKEVAKS
IAEEAAKTIKLRETAKMIPKENVKTPPKEIVKAIATEAPKTPLKDTPKTSPKETPKTSPK
DTPKTSPKEAVKILPKDTPKTSPKEAVKTPPKDTSKTRTKETPKMVPKGASNTLPKMAAK
EAPELSTQTFPELDVKHSFQPSQTKSSTMYRSQSEIRSEKVVEEVPKSWSSRLSIDLTDK
APSFSFGFGSTLKKAKSALEVVWKSGPPPSAAPPEPPPDSGSFMGRFCTLSTSTANDSST
TIDSDVYTDSFVYKAEDEDEATTGDQLEDNETAYVGVMEQVLANLENRSNANDTEETEEF
EEPILDYDPDASQDYVSEDYEATTQDYEDSDEVEATQEAAVVLEYDCSLDEHYDEEYSED
YVDDAMTGDTAEDTAEYEAMVEYVEVEEPDEEEEEEEEEEEELMEDMEEGDEMEEASEAS
VSERMENLEDENKNIPEKEEMPAEAPPKKRIRPTFKEAALRAYRKQMDELQQQILAGEKP
PPHNKPLNVLDPKVLGLQAVGGAGCILYGIDSMPDLRRKRTLPIVRDLAMTLAARKAGIS
FALVTRSTLNNEDLKLHVFRKTLQALIYPISSTTPHNFEVWTATAPTYCHECEGLLWGIA
RQGMRCSECGVKCHEKCQDLLNADCLQRAVEKSSKHGAEDKTLNIIMAMKERMKIREKNR
PEVFEVIQEMFGISKEDFTGHLKTAKQAVLEGTSKWSAKINITVMCAQGLQAKDKTGSSD
PYVTVQVGKTKRRTKTIFGNLNPVWDEKFFFECHNATDRIKVRVWDEDDDIKSRMKQHFK
RESDDFLGQTIIEVRMLSGEMDVWYNLDKRTDKSMVSGAIRLKLNVEMKGEEKVAPPHGQ
YTCLHENLFHHLTEVKNSGAVKIPEVKGEEAWKVYYDDVSQEIVDEFAMRYGVESIYQAM
THFSCLSSKYMCPGVPAVMSNLLANINAYFAHTTTISTNISASDRFAASNFGREKFVKLL
DQLHNSLRIDLSKYRDNFPAGNPERLQDLKSTVDLLTSITFFRMKVQELQSPPRASMVVK
DCVRACLDSTYKYIFDNCHELYNQLLDQARKQNLPREEQGPSIKNLDFWPKLITLMVSVI
DEDRTAYTPVINQFPQELNMGKVSAEFIWNLFALDMKYAMEEHDKHRLCKSTEYMNLHFK
VKWFHNEYVRELAAFKDTPPEYSLWFEPFVIQWLSENEDVAMDFLHGALGSDKKLGFQPT
SEHVLFSCSVVDVFTQLNQSFEIIKKLECPNPQALAHFMCRFAKTINKVLLQYAAIITKD
FGLYLNQEKVPCILINNIQQLRVQLEKMFESMGGKQEEGAVSFCKLDAEASELLKELQNK
LNTVLDELSAVFGSSFKPVIEDCVKQMNQELVQMKGSAAGKSNAAMDAETVLRPLMDLLD
KNLILFAKICEKTVLKRVLKELWKIVIITIERMIVLPPLNDQNQGAQMIFSAAKDLGQLS
KLKDHVIREEARSLTPRQCAAMDLVLPTIKQYFHAGGNGLKKTFLEKSPDLKSLKYALSL
YTQPTDALIKKYICTQTSQGQSTDSSVGEVSMQVDLISHPGTGEHKVNVKVVGVNNLSWQ
TNAMFRPFVEVNAVGPHLADKKRKFTTKTKNNNWSPKYNETFQYVLSNEYGPECYELHVS
VKDYCFAREDRIIGMAVLQLRDLADQGSCCACYPLVKSISMDDTGLTIMRILSQRTNDEV
AKEFCRLKTDVRSSEEVAS
NT seq
7620 nt
NT seq
+upstream
nt +downstream
nt
atggtttctgccctgctccagaccctatcatcttacatcgtgaagatttgcaaaggaatg
tttacaaagaaattggtgaatcccacaaagaagaaagagagtagtgacaataaagagccc
aaattgaccaccactgatttgcgtgaccaaggtaacctgacgccgacactctccaccact
ctgaaaaccacagtgaaaaatatcagcaaatgctcttcggcgcgtaacatctctcttgaa
ttagacgacggaaaaaatgactgctcatctctctcaccgactttcagttaccgtgtagcg
atagccaacggactcccgaaaaacactcttctgctgaacaataatgagagtatcttccag
gagatcctctccatcaatagcgaatactctgactccctgagcgaggccaaacctgtgcat
agattcgatgagcagaaatctcacaccatgccagtgagacggaacaggaagagcctcatt
agtctggcgccctccgatggcagctcagagggtgagagggtggagcgctcaagtctgcac
actctccgacttggcgcgctacgcaagctgaggaaatggaaaaagagtcaggagtgcgtg
tcttcggactccgaggtgagcaactggaggaagaccctgggtatccggagcaagtccctg
gaccgggctgggaggcagcagaagtcaacctctgccttagaagccggctccagctctaca
ggctgcatcaaccaaacccaggatgtgatggagatgatctttaaggagctgcagggcatc
agccagatcgagacagagctttcagagctcaggggacacgtcaatgccctgaagaactcc
atcgacgagatctcctccagcgtggaggtggtgcagaccgagatcgaacaactgcgtact
ggctttgtccagtcccggagagagacacgagacatccacgactacatcaagcaggtcagc
caccaggccaacaaggccagcctgaggtttataaacgtccctgaggagaagcttgagaaa
actgagagtctcatctatcacattctaaaggacaaaatgggatttgctgaagcacataaa
acacttaaaatagagctagcccatcggttagggcaacaaagagaatgttccaatgcaaaa
cctaggcctattattgtaatattctcaaccccctcagatagagatttagttttgaaaaaa
tgctacaaactgaaggggactggtatatctgtatccactgatagcttaacgactcatgat
gtgaaggaaaagaaagataaaggagaaatgtcctcttctcaaacctacgagagcatggac
attaaggtctcagccaaggacaaagctgagagtgatgactgggactctatggacagtgac
aaggagctagacgaactaaacaggaacaaatatgcaatggtggtgtctaagcccgttcac
aaacataaagcagataaaaagaggcacggtcaccatgagcacggtagccggtctttggat
gaggcaggctactctgcctcagttcattacgctgatgactcctatgatgagtctgacaaa
gcctccaagccctactatggtgacctcacccccggctggctttctcagagcgactactcc
acccccaagctcagccgctccgagtctgactgctccaagctctgccagtcctactctgaa
gacttctcagagagccagtacttcagccggcccaatggcagctctctactatcctcctca
gaccaggagctgtggcagaggaagcaggaggacatggcgtcatcatggtatgccagccag
accctcagccaggagaaccctccgtacgctgagcccaacgaggccgagaccaccgagacc
atcgacagtggggtgagcaatgggttgatctgcatgtctggggataggagccattacagc
ggctcacagctgtctctgcagggagacctctccccatggaaggactggcctcacctggag
cagggagcagactctgggctggacgcttccacagagcagaacctggtgtctgaggtcagc
agcccctttgacccagctgccatccctggcttccctgagaacataaccaagtgtcaggag
gtggacctggcatttgaaggggaggagactttcatgttggatatggtggaaagcaccctc
ttggacactgccccactggagatcacccaactagagagtgcccggctgggtagtgctccc
cccactactctttacacagcccctatcgtagcgaaagaacctgttgtaacaccacctgtc
cataagcctaaagctaaagagactgctaaaacacttcctaaagaaacttctaaagcagct
cctaaagctaaaacacctcctaaagagttagctaaaactgttcctaaagagattgctaag
actattcctaaagaggttgctaaaactattcctaaagaggttgcaaaaactattcctaaa
gaggtttctaacactatttataaagtgacttctaaaccggcaaaagaggttgctaaatca
attgctgaagaagctgctaaaactattaaactaagagaaacagccaaaatgattcctaaa
gagaatgttaaaacacctcctaaagaaattgttaaagctattgctacagaggctcctaaa
acacctctgaaagacactcccaaaacaagcccaaaagaaactcccaaaacaagtccgaaa
gacactcccaaaacaagtccaaaagaggctgtgaaaatacttcccaaagacactcctaaa
acaagtccaaaagaggctgtgaaaacacctcccaaagacacttctaaaactcgtacaaaa
gagacacctaaaatggttcctaaaggggcatctaacacacttcctaaaatggcagctaaa
gaagcccctgaactatccacccaaacattccctgagcttgatgtcaaacacagcttccaa
ccgagccagaccaagtcatccaccatgtaccgtagccagagcgagatccggtccgagaaa
gttgtagaggaggtgcccaagtcctggagcagccgcctcagcattgacctcactgacaaa
gctccatccttcagctttgggttcggctccacactgaagaaggcaaaatcagccctggag
gtggtgtggaagtcaggccctccacctagtgccgctcccccagagccacccccagactca
ggctccttcatgggccgcttctgcacactgtccacctccacggccaacgactccagcacc
accatcgactcagacgtctacacagattccttcgtctacaaggctgaagatgaagatgag
gctaccactggtgaccagcttgaggacaacgagaccgcctatgtcggggtgatggagcag
gtcctggccaacctggagaaccggtccaacgccaacgacacagaagagacagaggagttt
gaggagcccatactggattatgatcctgatgcctctcaggattatgtctctgaagactat
gaggctaccacccaggattacgaggactctgatgaagttgaggccacccaggaggctgca
gtcgttctggagtatgactgtagtctggatgagcattacgacgaggagtacagtgaggat
tacgttgatgatgccatgacgggggacacggcagaggacacagcagagtatgaggccatg
gtggagtatgtcgaggtggaggagcctgacgaggaggaagaagaggaggaggaggaggaa
gaggagttaatggaggacatggaagagggggatgagatggaggaggcctccgaagcatct
gtgtcggagaggatggaaaacctagaggatgagaacaaaaacattccggagaaggaggag
atgcctgcagaggctccgcccaaaaagcgaatccgtccaacgtttaaggaggctgcgctg
agggcctacaggaagcagatggatgagctgcagcagcagatcctggctggagaaaaacct
ccaccacacaacaagcctctcaatgtgctggatcccaaagtactgggcctacaggctgtc
ggaggagctggctgcattctttatggcattgacagcatgccagatttacgccgcaagagg
accttacctattgtccgagacctggctatgactctcgctgctcgaaaggcaggcatctcg
ttcgccctggtgactagatcgaccctgaacaacgaggacctgaaactgcacgtgtttagg
aagacgttgcaggcgttgatctatcccatctcgtctacgacgcctcataactttgaggtg
tggacggccaccgccccaacctactgccacgagtgtgagggcctgctgtggggcatcgcc
aggcagggtatgcgctgctctgagtgtggtgtcaaatgccacgagaagtgtcaggatcta
ctcaacgccgactgcctgcagagggcggtggagaagagttctaagcatggcgctgaggac
aagaccctgaacattatcatggccatgaaggagaggatgaagatcagggagaagaaccgg
cctgaggtgtttgaggtcatccaggagatgtttgggatctctaaagaggacttcactgga
cacctgaagaccgccaagcaagcagtgctggagggaacctccaagtggtccgccaagatc
aacatcacagtgatgtgtgcccagggtctgcaggccaaggataagacaggttccagtgac
ccctatgtgactgtccaggtagggaagaccaaacggcgtaccaagaccatctttgggaac
ctcaaccctgtctgggatgagaagttcttctttgagtgtcacaacgctacagaccggatc
aaggtgcgtgtgtgggatgaggatgatgacatcaagtctcgcatgaaacaacacttcaaa
cgagagtcggacgacttcctgggtcagaccatcatcgaggtccgcatgctcagcggggag
atggatgtgtggtacaacctggataagagaactgataagtcgatggtgtcgggagccatc
agattgaagctcaacgtggagatgaagggagaggagaaagtagctccgccccatggccag
tacacctgtttacatgagaacctgttccaccacctgacggaggtaaagaacagtggagcg
gtgaagataccagaggtgaaaggagaggaggcgtggaaggtctactatgacgacgtgtcc
caggagatagtggatgagttcgccatgagatacggagtagagtccatctaccaggccatg
acgcatttctcctgtctgtcctctaagtacatgtgtccgggggtcccagcggtgatgagt
aacctgctagccaacatcaacgcctactttgcccacaccaccaccatctcaaccaacatc
tctgcctccgaccgcttcgctgcatccaactttgggagagaaaaatttgtcaaacttcta
gatcagctgcacaactctctgaggattgatctgtccaagtatcgggataatttcccagct
ggtaacccagagcgtctccaggacctgaagtctactgtggaccttctcaccagcatcacc
ttcttcaggatgaaggtacaggagctacagagtcctcccagagccagtatggtggtgaag
gactgtgtcagagcctgtctggactcaacatacaaatacatctttgacaactgtcatgaa
ctctacaaccagctactagatcaggcccgtaagcagaatcttccccgggaggagcagggt
ccgtctataaagaacctggacttctggcccaagctcatcactctcatggtgtctgtgatc
gacgaggaccgcaccgcctacacccctgtcatcaaccaatttccccaagagctgaatatg
gggaaggtcagcgctgagttcatatggaacctttttgccctggacatgaaatacgccatg
gaagagcacgataagcaccgtctatgcaagagcacagagtacatgaaccttcactttaaa
gtcaagtggttccacaacgagtacgtccgcgaactggctgctttcaaggacacaccccct
gagtattctctgtggttcgagccgtttgtcattcagtggctgtctgagaatgaggatgtt
gccatggacttcctacacggagctctggggagcgacaagaagcttggcttccagccaacg
tcggaacatgtcctgttctcctgttcggtggtggatgtgttcactcagctcaaccagagt
tttgagatcattaagaagctggagtgccccaacccacaggccctggctcacttcatgtgc
cgctttgctaagaccatcaacaaagttctgttgcagtatgctgcaatcataaccaaggat
tttggcttgtatctgaaccaggagaaagtgccctgcatcctcatcaacaacatccagcag
ctcagagttcagctggagaagatgtttgagtccatgggaggcaaacaggaggagggggct
gtgtccttttgcaagctggatgctgaggccagtgaactactgaaggaactgcagaacaaa
ctcaacaccgtgctggatgagctcagtgcagtcttcggctccagtttcaaaccggtgatt
gaggactgtgtaaagcagatgaaccaggaattagtccagatgaaggggagtgctgcaggg
aagagcaacgctgccatggatgctgagactgtcctcagaccactcatggacctcctggat
aaaaatttgattttatttgcaaagatctgtgagaagacggtgttgaaacgagtcctgaag
gaactgtggaagatcgtcatcatcactattgagagaatgatagtcttaccacctctcaat
gaccagaatcaaggagcccagatgattttcagtgctgccaaggacctgggacagctatcc
aaactcaaagaccatgtgatcagagaggaagcccgtagcctgacaccaagacagtgtgca
gccatggaccttgtccttcccaccatcaagcaatatttccacgccggaggaaacggtctg
aagaagacgttccttgagaagagccctgacctcaagtccctcaaatacgctctgagcctt
tacacacagcctactgatgccttgatcaagaagtatatatgcacccaaacctctcaaggt
cagtctaccgacagctccgtgggggaggtgtccatgcaagtggatctcatctctcaccct
ggcaccggagagcacaaagtcaacgtgaaggtggtgggggtcaacaacctaagctggcag
accaatgccatgttccgaccgttcgtggaggtgaatgcggttgggccgcacctcgccgac
aagaaacgcaagttcaccaccaagaccaagaacaacaattggtcaccaaagtacaacgaa
acattccaatatgttctgagcaatgagtacggtccagagtgctacgagctgcacgtctca
gtgaaggactactgcttcgccagagaggaccgtatcatcggcatggcggtcctccagctc
agagacctggccgaccaggggagctgctgtgcctgctaccccctggtgaagagcatctcc
atggacgacaccggactcaccatcatgaggatactctctcaaaggaccaacgacgaagtg
gccaaagagttttgtcgtctcaagaccgacgtacgctcttcagaggaggtggcctcctag
DBGET
integrated database retrieval system
