Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139411644
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Entry
139411644 CDS
T10872
Name
(RefSeq) ATPase family gene 2 protein homolog B isoform X1
KO
K26051
ribosome biogenesis protein SPATA5L1 [EC:
3.6.4.10
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ocla03009
]
139411644
Enzymes [BR:
ocla01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.4 Acting on acid anhydrides to facilitate cellular and subcellular movement
3.6.4.10 non-chaperonin molecular chaperone ATPase
139411644
Ribosome biogenesis [BR:
ocla03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
139411644
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
AAA_16
AAA_5
RuvB_N
AAA_22
AAA_33
TIP49
AAA_14
Rad17
AAA_11
ABC_tran
nSTAND3
AAA_lid_PRS2_C
bpMoxR
Mg_chelatase
Motif
Other DBs
NCBI-GeneID:
139411644
NCBI-ProteinID:
XP_071014347
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All DBs
Position
6:complement(78256791..78268850)
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AA seq
772 aa
AA seq
DB search
MEEVSLRVLPMDPADRGTQRVRLGPGLMSSLGLGLGSPVLVALSGGSCLCTAWPRPDLAD
GFIQIDMKCCSSNLILNKATPTHLSLPLTPSPNPSPSSSPLPPSPCLSPSLTPVSCPKLK
GIRITVVVQSVEFRKTTPPSFIHELVKDMLKGTYVHQKHVIDVGDYDTDIKLIVIESLNP
ESTVTGLVTSKTGVEITGTRTLRYYRGQLQEQPQVLLGGLEEVSASLREMLHLPLQYPAT
LGSLGLSCPRGVLLAGPPGVGKTLLVRCLVGEVGASLITVRGPEVVGSRPGESEERLRAV
FGRARAAAEEGPCVLFLDELDSLCPRRTGSSAPENRLVAQLLTLMDGMDQSDRFLIVGAT
NQPDSLDPALRRPGRFDREVVIGSPTAQQRLSILSVLCQAMPVCVSVDWAELAQRTTGYV
GADLSALCREAAMLAIRHNTPGSGEQAITMEHFLSALKTVRPSCLRGSLGRTDLPAVSWE
QIGGLEEVKVKLQQSIEWPMRYPEAFVRLGLSRPRGVLLYGPPGCAKTTLVRAAATSSHC
SFLSVSGADLYSPYVGDSEKALAQLFRQARACAPSILFLDEVDSLIGSRSEGHVPQSAQT
RLLSVLLNELDGVGFRTLERRGAGKTLQAEGVEHHQQQEHLEYQEVCNKEVMIVAATNRP
DSLDSALLRPGRLDQIIYVPPPDLQARVSILQVCTEKMPLDDDVCLEELARHTDLYSGAD
LENLCREAALLTLQDESMEASSIKHRYFLQSLQRMTPSLSTQQLQTYKNLFR
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggtgtctctgagagtgctgccaatggacccagcagaccggggaacccagagg
gtcagactgggcccagggctgatgtcctccctggggttggggctgggctctcctgttctg
gtggctctgtctggagggtcctgtctctgtactgcctggcccaggcctgacctggctgac
ggattcatacagatagacatgaaatgttgttcttcaaatcttatcttaaacaaagctaca
cccacacacctcagcctacccctaacccccagccctaaccctagccccagctctagccca
cttccccccagcccatgcctaagtcctagtctcaccccagtctcctgccccaagctgaaa
ggcatccgaataacagtggtggttcagagtgtggagttccggaaaaccacccctcccagt
ttcatccatgaactagtgaaggacatgctgaaagggacatatgtccaccagaagcacgtg
atagatgtgggtgactatgacacggacattaaactgatcgtcattgagagcctgaaccca
gagtccaccgtgactggtttggttacatctaagacaggggtggaaataacggggacgagg
accctccggtattacagaggacagctccaggagcagccccaggtcctgctgggtggactg
gaagaggtgtcagcgtctctgagagagatgttgcacctgcctctgcagtaccctgctacc
ctgggctccctgggtctctcctgccccagaggagtgctccttgctgggccgccgggggtc
ggaaagaccctgctggtccgctgcctggtgggggaggtgggggccagcctgatcacagtc
agaggaccagaggtagtggggtctcggccaggggaaagtgaggagaggttgcgggcggtg
tttggtcgggcgcgggcagcggcagaggaagggccttgtgtgttgttcctggatgagctg
gactctctctgtcccagacggactggatcctccgcacccgagaaccggctggtcgctcaa
ctgctcacgctcatggacggcatggaccaatcagatcgcttcctcatcgtaggagccact
aatcagccagacagcttggacccggcgctacggaggcccgggaggttcgacagagaggtg
gttatcggttcccccacagcacagcagcggttgtccatcctgtcagtgctgtgccaggcc
atgccagtgtgtgtcagtgtggactgggcagagctggcccagaggactacaggatatgtg
ggtgctgacctcagtgctctctgccgtgaggctgccatgctggctatacgacacaacaca
ccgggttcaggggagcaggctatcaccatggaacacttcctgtctgccctgaagactgtc
cgtccatcctgtctgagaggcagtctgggacggacagacctcccagccgtctcctgggaa
cagataggaggcctggaggaagtcaaagtcaaactacaacagagtatagagtggccaatg
cgttacccggaggcgtttgtgcgtctgggtctgtcccgtcccaggggggtgttgctgtac
ggtcccccaggctgtgctaagaccaccctggtcagggctgcagctacctcctcccattgc
tccttcctgtcagtcagcggggctgacctctactctccatatgtaggagattcggagaag
gccctggctcagctctttcgtcaggcgcgggcctgcgctccctccatcctgttcctggat
gaggtggactctctgattggctcccggtcagaaggccatgtccctcagagtgcccagacc
cgcctcctgtctgtgctgctgaatgagctggacggggtaggctttaggaccctggagagg
cgaggagcagggaagaccctacaggctgagggagtggagcaccaccagcaacaggaacat
ttggagtaccaggaggtgtgtaacaaggaagtgatgatcgtagcggccactaacagacca
gactctctggacagtgccctcctaaggcctggaagactggaccagatcatctatgtaccc
ccacctgacctacaggcgcgtgtgtccatcctgcaggtgtgtacagagaagatgcccctg
gatgatgatgtgtgtctggaggagctggctagacacactgacctttactctggagcagac
ctggagaacctgtgcagagaggcagctctgttgacgctccaggatgaaagtatggaagct
tctagtatcaaacaccgatacttcctccagtctttacagaggatgactccctctctttcg
acccagcaactacagacatacaaaaacctcttcagatga
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