Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139411682
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Entry
139411682 CDS
T10872
Name
(RefSeq) cysteine--tRNA ligase, cytoplasmic isoform X1
KO
K01883
cysteinyl-tRNA synthetase [EC:
6.1.1.16
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
139411682
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ocla01007
]
139411682
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ocla03016
]
139411682
Enzymes [BR:
ocla01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.16 cysteine---tRNA ligase
139411682
Amino acid related enzymes [BR:
ocla01007
]
Aminoacyl-tRNA synthetase
Class I (G)
139411682
Transfer RNA biogenesis [BR:
ocla03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
139411682
Prokaryotic type
139411682
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1e
tRNA-synt_1g
Arc1p_N_like
tRNA-synt_1
Motif
Other DBs
NCBI-GeneID:
139411682
NCBI-ProteinID:
XP_071014413
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All DBs
Position
6:complement(80371732..80391837)
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AA seq
822 aa
AA seq
DB search
MSSSGELAFDYGFLLHTSEEATATVALNEYLSSRSYLAGFSPSRVDQEVFELLHRPPAPQ
HVHALRWYRHIAALQRETPSPDSSIKGKRVQHPWSAPAGSNLPKLRLYNSLTRIKELFVP
QNGNKVSWYCCGPTVYDASHMGHARSYISFDILRRILMNYFQYDVFYCMNITDIDDKIIR
RARQNYLLEQYREKKPAAAQVLQDVLSARGPFQAKLAETTDPDKKQMLERLDSAVAAALG
PLQGAVESKAGEADIQRLAQVLLEKAKDLLSDWLDAQFGSQVTENSIFSLLPKFWEGEYH
NDMDALNVLPPDVLTRVSEYCPEIVDFVKKILDNGFGYESNGSVYFDTAKFATSQKHAYG
KLVPEAVGDMKALQEGEGDLSVSADQLSEKRSQNDFALWKASKPGEPSWDSPWGKGRPGW
HIECSAMAGSILGESMDIHGGGFDLRFPHHDNELAQSEAYFENDHWVRYFLHTGHLTIAG
CKMSKSLKNFITIKDALAKNTARQLRLAFLMHSWKDTLDYSSNTMESAVHYEKFLNEFFL
NVKDILRAPCDITGQFEKWEAAEMELNESFYERKAAVHAALCDNVDTRSTMEEMRALVTQ
SNTYIASRKSSKLQPNRMLMKSIALYLTDMLKTFGAIEGTEPIGFPVGGDGHHVDMETTV
MPYLKVLSDFRESVRKIAREQNVTEVLQLCDVVRNDTLPELGVRLEDHEGLPTVVKLVDK
ETLLRERNEKKKMEDEKKNKKEEAAKKKQEQELAKLAKMKISPCDMFRSETDKYSSFDET
GFPTHDVEGKDLSKGQTKKLRKLHEAQEKLHQEYLQTNQNGC
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagctcgggagagttagcctttgattatggcttcttgctgcacacaagtgaggag
gccacagccaccgtggctctgaatgagtacctgagctcccgcagctacctggctgggttc
agcccctctcgggtggaccaggaggtctttgagctcctgcacaggcccccggccccgcag
cacgtgcacgctctgcgctggtacaggcacatagcagccctgcagcgggagacccccagc
ccagatagcagcataaagggaaagagggtccagcacccctggtctgccccagccgggtcc
aacctgccaaagctgcgactctacaacagcctcacacgcatcaaggagctgtttgttccc
cagaatggaaacaaggtgtcgtggtactgctgcggacccactgtctatgatgcctctcac
atgggacatgccagatcgtacatatcttttgatatcctccggaggattctgatgaactat
ttccaatatgacgtgttctactgcatgaacattacggacatagatgacaagatcatcagg
cgggccagacagaactaccttctggaacagtacagagagaagaagccagcggctgcccag
gtactgcaggatgtccttagtgccagagggcccttccaggccaagctggccgagaccaca
gacccagacaagaaacagatgctggagaggctggactctgccgtcgctgctgctctggga
cccctgcagggggcggtggagagcaaggctggggaggctgacatacaacgcctggctcag
gtgttactggagaaggccaaagacctgctgtctgattggttggatgctcaatttggcagt
caggtgaccgagaactccatcttctctcttcttccaaagttctgggaaggggagtaccac
aacgacatggacgccttgaatgtccttcccccagacgtactcacccgcgtcagcgaatac
tgcccagagatcgtggactttgtgaagaagatcctagacaatggcttcgggtacgagtcc
aacggctcagtttattttgacacagccaagtttgccaccagccagaaacacgcgtacggc
aagctggtacctgaggcggtcggcgacatgaaagctctgcaggagggagagggagatctg
agtgtctcagcagaccagctcagtgagaagaggtcgcagaatgactttgccctgtggaag
gcctctaagccgggggagccgtcctgggactcaccctggggaaagggtcggcctggctgg
catatcgaatgttccgctatggctggttccatcttgggagagtccatggacatccacggg
ggagggtttgacctccgattcccccatcacgataatgagttggctcagtccgaggcttac
tttgagaacgaccactgggttcgctacttcctgcacactggtcacctgaccatcgcaggc
tgcaagatgtccaaatctctcaagaacttcatcaccatcaaggatgccctggcgaagaac
acagctcggcagctccgtctagccttcctgatgcattcctggaaggacaccctggattac
tcctccaacaccatggagtcggctgtccactacgagaaattcctgaatgagtttttcctc
aacgtcaaagacattctccgagctccctgtgacatcaccggacagtttgagaagtgggag
gcagcagagatggagctcaacgagagtttctatgagaggaaggcagcagtccacgcggcg
ctgtgtgacaacgtggacacgcgcagcaccatggaggagatgagggcgctggtaactcag
agcaacacctacatagccagtaggaagagctccaagctacagcccaaccgcatgctgatg
aagagcatcgctctctacctgactgacatgctcaagacctttggggccattgaagggaca
gagcctattggattcccagtgggaggagatggtcaccatgtggatatggagaccacagtg
atgccctatctgaaggtgctgtcagacttcagagaatctgttcgcaaaattgccagagaa
cagaatgtgacagaggttctacagctctgtgacgtggtccgtaatgacaccttacctgag
ctgggggtgcgtctagaagaccatgaaggccttcccactgtggtgaagctggtggacaaa
gagaccctgctgagggagaggaatgagaaaaagaagatggaggacgagaagaagaacaag
aaagaggaggctgccaaaaagaagcaggagcaagagttggccaaacttgcgaagatgaaa
atctccccgtgcgatatgttccgctctgaaaccgacaagtattccagctttgatgagacg
ggtttccccacgcatgacgtggaggggaaggatctcagtaaaggacagaccaagaagctg
cggaaactccacgaggcccaggagaaactgcaccaagagtatctccagaccaatcaaaat
ggctgctga
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