Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139411717
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Entry
139411717 CDS
T10872
Name
(RefSeq) TBC1 domain family member 23
KO
K22555
TBC1 domain family member 23
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139411717
Membrane trafficking [BR:
ocla04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
139411717
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Ortholog
Paralog
GFIT
Motif
Pfam:
TBC1D23_C
RabGAP-TBC
Rhodanese
RabGap-TBC_2
Motif
Other DBs
NCBI-GeneID:
139411717
NCBI-ProteinID:
XP_071014532
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All DBs
Position
1:721149..799848
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AA seq
709 aa
AA seq
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MADAVEEVLEGSWDQDLAEALDSGGSDLELEMDIQGELGLGGGLGLDGEEAGEVIRVQEL
PAQQRAKLWKIALNVAGKGDSLSSWDGVLDLPEQNLIHTRCQQLIDQLGCVAEEEGRDMV
SDVESVITFYCKSRNITFTPDLSWPHLLKPLLGLQLPRSDLYNCFYAIMNKYIPRDCVVK
GRPFHLYRLLLQYHEPELCSFLDTKKITPDSYTIHWLGSLFSSHCLPEVTQAMWDFYLQQ
ADPFLIFFLLLIILVNAKDNILQQEGDSKEDIIKMLEDSPALLEADDIEDLFSLAQYYWS
KTPLSLRKENQNLFGSSLVALKEEDMDLSQALCLPVSVPEILQANQLQPEGVRFFVVDCR
PAEQYNAGHLSTAFHLDSDLMLQNPSEFSLSVKSLLEAQKQSLESGSIASGEHLCFMGSG
REEEDMYMNMVLAHFLQKNKEYVSIAKGGFMALQQHLTDINVEGPDNYVHWIVSTSGSAE
GEALSTTGDKGVKSLVNKMTFALKSKSVIAKEKMISFMENTATPVDRMSFTLPWPEKGVP
DRHVSSSDRVGKPYRGVKPVFSIGDEEEYDTDEIDSSSMSDDDRKEIVNIQTWINKPDVK
HHVPCNEVKETGHMFPSHLLITATHMYCLREIASRKGFAYIQSRQALNSVVKITSKKKHP
ELITFKFGNSNTAGIEISAVERYLIPNAGDATKAIKQQIMKVLDALESS
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgcagtggaggaagttcttgaaggcagctgggatcaggatctggctgaggcc
ctggactctggaggctctgacctggagctagagatggacatacagggggagctggggttg
gggggagggctggggctggatggggaagaggccggggaggttattcgagtccaggagcta
ccagcccagcagagagccaagctgtggaagattgcgctgaatgtggcaggtaaaggagac
agtctgtcctcgtgggatggagtcctggatcttccagaacagaaccttatacacacccgc
tgccagcagctcattgaccagctggggtgcgtggcggaggaggaggggcgtgacatggtg
tctgacgtagagtctgtcatcacgttctactgtaagtcccgaaacatcaccttcacccct
gacctctcctggccacacctcctcaaacccctgctgggcctgcagctgccccgctccgat
ctctacaactgcttctacgccatcatgaataaatatatcccacgggactgtgtagtgaag
ggccgtccgttccacctgtacagactgctgcttcagtatcatgaaccagaactctgctcc
ttcctcgacaccaagaagatcaccccagactcctacactatacactggctaggcagtctg
ttctccagtcactgcctaccagaggtgactcaggccatgtgggacttttacctccaacag
gctgaccccttcctcatcttcttcctcctgctcatcatcctcgtcaatgccaaagataac
atcctgcaacaagaaggggacagtaaagaagatatcattaagatgttggaggactctcct
gccctgttagaggctgatgatatagaagacctgttctctctggcccagtattactggagc
aagacccctctgtctctcagaaaggagaaccagaacttgtttgggtccagcctggtggca
ctgaaggaggaagacatggatctgagtcaggctctctgtctccctgtgtctgtccctgag
atactgcaggccaaccagctgcagcctgaaggggttcggttctttgtggtggactgtcga
cctgctgagcagtacaacgctggacacctctctactgccttccacctggactcagacttg
atgctgcagaatccgtcagagttcagcctatcagtgaagtccctcctggaggcccagaaa
cagagtctagagtctggctccatcgctagtggagaacacctctgcttcatgggttcaggg
agggaggaggaggacatgtacatgaacatggtgctggcacacttcctacagaaaaacaaa
gaatacgtcagtatcgctaaaggtggttttatggccctgcagcagcacctaacagacatc
aatgtggagggaccagacaactatgtccactggatagtcagcacctctggatcagctgaa
ggagaggctttgagcaccacaggggataaaggagtcaagtctctggtcaacaagatgacc
tttgccctcaagtccaagtctgtcatagcgaaggagaagatgatcagctttatggagaac
acggctacacctgtagacagaatgtctttcactctcccctggccagagaagggggtccct
gaccgacatgtgagcagtagtgaccgggttggaaaaccttacagaggagtgaagccagtg
ttcagcatcggtgatgaggaagagtatgatacagatgagattgacagctcgtccatgtcg
gatgatgacaggaaggagatcgtaaatatccagacgtggatcaacaaaccagacgtgaag
caccatgttccctgtaatgaggtcaaggaaaccggacacatgttccccagtcacctgttg
atcacagcgacccacatgtactgtctgagggagatcgcgtccaggaagggttttgcctat
atccagtccagacaggccctcaacagcgtggtcaagatcacctccaagaaaaaacaccca
gaactcatcaccttcaagtttggcaacagcaacactgctggaatagagatctctgctgtg
gaaaggtatctgatccccaacgcgggtgatgccaccaaggccattaaacagcagatcatg
aaggttctggatgccctggagagttcctag
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integrated database retrieval system
