Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139411756
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Entry
139411756 CDS
T10872
Name
(RefSeq) tropomodulin-3-like isoform X1
KO
K10370
tropomodulin
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
139411756
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ocla04812
]
139411756
Cytoskeleton proteins [BR:
ocla04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Capping proteins
139411756
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tropomodulin
LRR_6
Cmr7b-like
Motif
Other DBs
NCBI-GeneID:
139411756
NCBI-ProteinID:
XP_071014575
LinkDB
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Position
6:86880085..86931714
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AA seq
348 aa
AA seq
DB search
MALSFKKDLEKYKEIDEDEILNNLSEQELKQLETALEEMDPENALLPASMRQKDHTVKAA
TGPYSREKLLSFLEKEEALEYKDRDDVVSFSGERKGKAFVPKQRPIESRQEEVTTLDPEL
EEALSSATDTELCDLAAILGVHTLVTSTQSYDGTSSKDGGYNNVVKGEKMNPVFDEPPNP
TNVDDTLQRIKSNDAALTEVNLNNIKNIPIPTLKEFAKAMERNTHVKKFSLAATRSNDPI
AVAMSEMLKENKWLRSLNLESNFITSAGAAALVDSLRDNDTLTEIKIDNQRQQLGTSVEM
EMAKMLEDNNSIVKFGYHFCQQGPRARAAAAITKNNDLIRKRRVEGDQ
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atggcattgtcgtttaagaaagacctggagaagtacaaggagattgacgaggatgagatc
cttaacaacctgtcagagcaggaactcaaacaactggagactgccctggaggagatggac
ccagagaatgcattgctgccagcgtcgatgcgtcagaaggaccacacagtgaaagcagcc
accggcccctacagcagagagaaactactcagttttctggagaaggaggaagccctggag
tataaagacagagatgatgtggtgtctttctctggagagaggaaaggcaaggcatttgtt
cccaagcagcggcccatcgagtctcgtcaggaagaggtaacgacccttgacccggaacta
gaagaggccctgtccagtgctaccgacactgaactctgtgacctggcagccatcctaggt
gtccataccctggtgaccagcacccagagctacgatggaaccagcagtaaagacggagga
tataacaacgtggtgaagggggagaagatgaaccccgtgtttgatgagcctcccaacccc
actaacgtagacgacactctgcagaggataaaaagcaacgacgctgcgctgacggaggtt
aacctcaacaacatcaagaacattcccattcccacgctgaaggagtttgccaaggccatg
gagaggaacacacacgtcaagaagttcagcctcgccgccacacggagcaacgaccccatc
gctgtggcgatgagtgagatgctgaaggagaacaagtggttgcggagtctcaacctggag
tctaacttcatcaccagcgctggtgctgctgctctggtggactctctccgagacaacgac
acactgactgagatcaagatagataaccagaggcagcagctggggacttcagtagagatg
gagatggctaagatgctggaggacaacaacagcatagtgaagtttggctaccacttctgt
cagcaaggcccacgggctagagctgctgctgctatcaccaagaacaatgacctgatccgc
aagaggcgagtggagggggaccagtaa
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