Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139411758
Help
Entry
139411758 CDS
T10872
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 8-like isoform X1
KO
K11839
ubiquitin carboxyl-terminal hydrolase 8 [EC:
3.4.19.12
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04137
Mitophagy - animal
ocla04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
139411758
04137 Mitophagy - animal
139411758
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ocla01002
]
139411758
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139411758
04121 Ubiquitin system [BR:
ocla04121
]
139411758
Enzymes [BR:
ocla01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
139411758
Peptidases and inhibitors [BR:
ocla01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
139411758
Membrane trafficking [BR:
ocla04131
]
Endosome - Lysosome transport
Others
Others
139411758
Ubiquitin system [BR:
ocla04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
139411758
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
USP8_dimer
WW_USP8
UCH_1
Motif
Other DBs
NCBI-GeneID:
139411758
NCBI-ProteinID:
XP_071014586
LinkDB
All DBs
Position
6:complement(87084231..87114906)
Genome browser
AA seq
1106 aa
AA seq
DB search
MPAVSRGAKDLYLSTNLGDLNKKAEVKPDKINTRSYVQSACKIFKAAEECRLDGDEEKAY
VLYMKYLTVYDLIKKRPDFKQQQEFFLSVLGPTSFKKAIEEAEKLSESLKLRYEEVEVRK
TLEEKERQEEKKRREDKTEKDGGRASPKAGKEIKKVKEQKELKNVTSKAAVSAGGITAEG
LFKMMRDQAITVIVMDARCLRDFQDSQIQVPTQTVISVPEEAINPGITVNQIEANLPDAS
RETWKRRGFVDYIILLDWFSSVTDLKLGSTLQSLKDALYKWDSTTILRSEPMVLEGGYES
WLLFYPMYTSNAKVRPPRTHCYSTLPQLNFSYPSLEEPKPPTPPPPEPDPEPQAPPASLG
SVQVNGGPLEDLTPSTWMEADATDSPHTGFTHPGVDHSKKDPGAGPGTPSQPGGTAKHIP
QIDRTKKPSVRVSDGSKTPLDALPRDLPPSSQNGPSVPQPNRSVKPAFDPAVPLTDEERG
QIHTETAALMEKARREQEQRKQERRTEEEWRERERREKENEEMERRKEEENRTQERKRLE
RHKAEEEKENGVREEREKREDTLTNGDSLDSPAPNRIVTEIKAPSPLKLSGDVKRSRQPG
RLQHRTVDDYVIPKRELLTRARSEEMGRSVPGLPVGWMKFLDTVTGTYRYYHSPTNRVHR
YPPEVSVPQTPPSTPPTAKQKQPRPAEPDQTMDRDQEQSKLKRSYSSPDISQDLREEGLK
KVTAPITAATRPTFNRETKPSTASVYTKVEIARPSAAKIRNLNPVFGGLGASLTGLRNLG
NTCYMNSILQCLCNTPAMVDYFNKNLYQEDINRANILGHRGEVAEEFGVIMKALWSGLYK
CISPRDFKVTIGKINESFSGQEQQDSQELLLFLMDGLHEDLNKAANRKGYIEEENDDLDD
QRAANQAWTKHKLLNESVIVALFQGQFKSTVQCLTCHRKSRTFETFMYLTLPLASTNKCS
LQDCLKLFSKEEKMTDQNKVFCRHCKALRDSVKKLEIWKVPPIILVHLKRFSYEGRWKQK
LQTTVDFPLENLDLSQYVIGPRLGLKRYNLFGVSNHYGGLDGGHYTAYCKNAMKQRWYKF
DDHEVSEISTSTVKSSAAYIFFFSSL
NT seq
3321 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcggtgtcccgcggggcgaaggacttgtacctctctactaacctgggggacctc
aacaagaaagctgaagtcaagcctgacaaaatcaacaccaggagctatgtccagagtgcc
tgtaagatcttcaaggctgcggaggagtgtcgtctggatggagacgaggagaaggcctat
gttctctacatgaaatacctaacggtttatgatctcatcaagaagaggcccgacttcaag
cagcaacaggagttcttcctgtccgtgctggggcccaccagctttaaaaaagccatagaa
gaagccgagaaactctctgaaagccttaaactcaggtacgaggaagtcgaggttcgcaaa
acacttgaggagaaagagagacaagaggagaagaaaaggagggaggataagacggagaaa
gatggagggagggcatctccaaaagcagggaaagagatcaagaaggtaaaagagcagaag
gagttgaaaaatgtaacttcaaaagctgcggtatcagcaggagggatcacagcagagggg
ttgttcaagatgatgagggaccaggccattacggtcattgtgatggacgcccgctgcctc
cgagacttccaggactcacagatccaggtccccacccagactgtcatcagtgtcccagag
gaggctatcaaccctggcatcacagtgaaccagattgaggccaatctacccgatgcgtcc
agagagacgtggaagagacgggggttcgtagattacatcatcctactggactggttcagc
tctgttaccgacctcaaactgggaagcaccttacaaagcctcaaagatgctctctacaag
tgggacagtaccactatcctgcgtagtgagcccatggttctggagggaggctatgagagc
tggctcctcttctaccccatgtacacatccaacgccaaagtcagaccgccccgaacacac
tgctacagcaccctcccacagctgaacttcagctacccgtcactggaggagcccaaacct
ccaacccctcctccccccgagccggaccctgaaccccaggctccccctgcctccctgggt
agcgtacaggtgaacggtggccccctggaggatctgaccccctccacatggatggaggct
gacgccacagactcaccccacacagggttcactcaccctggagtagaccacagcaagaag
gaccctggagctggtccagggacccccagccagcctggagggacagccaagcacatccca
cagatcgaccgtaccaagaagccatcagtcagagtctcagacgggtctaaaacccccctg
gatgccctccccagggacctgcccccctcctcccagaatggcccgtctgtaccccaaccc
aaccgctcggtcaaaccggcctttgacccggcggtgccgctgacggacgaggaacgaggt
cagatccacacagagacggctgctctgatggagaaggcccggagagagcaggaacaacgc
aaacaggaacgccgcaccgaggaggagtggagagagagggaacgccgggagaaggaaaat
gaggagatggagaggaggaaagaggaagagaacaggactcaggagaggaagaggttggag
agacacaaggcagaggaggagaaggagaacggggttagggaagagcgagagaagagggag
gatacgctgaccaacggtgattctctggactcgccggctcccaaccgtatcgtcactgag
attaaggctccctcccccctgaagcttagtggtgatgtaaagaggagtcgtcagcctggg
aggttacagcatagaacagttgatgactatgtcatacccaagcgggagctcctaactaga
gccagaagtgaagagatggggaggagtgtaccaggcctgcctgttggctggatgaagttc
ttggatacggtaaccggtacctaccgttactaccattccccaaccaaccgggtgcaccgc
tatccccctgaggtcagcgtgccccagacgcccccctccacccctcctacggccaaacag
aagcagcctcgccccgctgagccagaccagaccatggaccgtgaccaggagcagtccaaa
ctgaaacgttcctattcttctccagacatcagccaggacctgagggaggaggggctaaag
aaggttaccgcccctataactgcagccacgcgcccaacctttaacagggagaccaaaccg
tccactgctagcgtctacaccaaggtggagatcgcccgtccgtctgcggctaagatccgt
aacctgaaccctgtgttcggcggtctgggcgcctcgctcaccggcctgcggaacctcggg
aacacctgctacatgaactccatcctgcagtgtctctgcaacaccccggccatggtcgac
tacttcaacaagaacctctatcaggaggatatcaacagggcaaatatcctgggtcaccga
ggcgaggtggcagaggagtttggtgtgatcatgaaggctctgtggtcaggcctgtataag
tgtatcagcccccgcgactttaaggtcactatagggaagatcaatgaatccttctctggc
caggaacaacaggactcccaggagctgctgctcttccttatggacggactccacgaggac
ctcaacaaggctgctaaccgtaagggttacatagaggaggagaatgacgatctggacgac
cagcgggctgctaaccaggcctggaccaaacacaagctgctcaacgagtctgtcatcgta
gcgctgttccagggtcagtttaagagcacagttcagtgtctcacctgccacaggaagtcc
cgcaccttcgagacctttatgtacctgaccctgccgctggcctccaccaacaagtgttcc
ctgcaggactgtctgaagctgttttctaaggaggagaagatgaccgaccagaacaaggtg
ttctgtcgacactgtaaagctctcagagactccgtcaagaaactggagatctggaaggtc
ccgcccatcatactggttcaccttaaacggttctcgtacgagggacgttggaaacagaag
ctgcagacgacagtagacttccctctggagaacctagacctcagtcagtatgtcatcgga
cccagactcggcctcaagagatacaacctgtttggagtgtctaaccattatggcggtctg
gatgggggtcactacacagcctactgtaagaatgccatgaaacagcgctggtacaagttt
gacgaccacgaggtctccgaaatctccacctccaccgtcaagtcctccgcagcgtacatc
ttcttcttctcctccctgtga
DBGET
integrated database retrieval system
