Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139411772
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Entry
139411772 CDS
T10872
Name
(RefSeq) sodium/potassium/calcium exchanger 1-like
KO
K13749
solute carrier family 24 (sodium/potassium/calcium exchanger), member 1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
139411772
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ocla02000
]
139411772
Transporters [BR:
ocla02000
]
Solute carrier family (SLC)
SLC24: Na+/(Ca2+-K+) exchanger
139411772
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Na_Ca_ex
Motif
Other DBs
NCBI-GeneID:
139411772
NCBI-ProteinID:
XP_071014606
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Position
6:complement(88407735..88444518)
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AA seq
712 aa
AA seq
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MHLPQRRRLNRSRILFFLSGVLLCCVYTVTFKARLQEPRAARQAAAEEDPGTALPVEGGG
SDSGSVLEVDTREVVTSNLSSLTESYDDDVITRAPTVLEGDDVIVITVNRTDIKHCIYVE
DPEPEPPTEPPPTSPPPNTTTSPGIPGDVPHRKGEYPEDLFTVDQRRQGWVTLHILGMVY
MFVSLAIVCDEFFVPALGVITVKLDISDDVAGATFMAAGGSAPELFTSLIGVFISHSNVG
IGTIVGSAVFNILFVIGMCAIFSREMLHLTWWPLFRDVSFYIIDLIMLIVFFLDNTIMWW
ESVMLVSGYVAYVCFMKFNVQIEHFVKTQINKHKSIVKIIMPEEEEEKEPKKQNSGHPPP
DPPQNNVSPEPKPQPQDSPQKRDREKLKVKPTLQRGGSNASLHNSTNRNTIFQLMIHTLD
PLGEAGPEKTEQAEPSTSQTTPKEEEKPGPSETQTDQGPAGAGGSDGSDSGEGDESEEES
EDEEDEDDEDEEDDEENKDEEEGEENEEPLSLEWPDTRRKQATYLFLLPIVFPLWLTVPD
VRNPASRKYFAMTFIGSITWIAVFSYLMVWWAHQVGETIGISEEIMGLTILAAGTSIPDL
ITSVIVARKGLGDMAVSSSVGSNIFDITMGLPVPWLIFSAMQGGVPVAVNSNGLFCAIVL
LFVMLLFVIVSIAACRWKMSRVLGLTMFMLYFVFLVLSVMLEDRIIICPVSI
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgcatttgccacaaagacggagactcaatcggagtcgcatcctcttcttcctctctggt
gtattactgtgctgcgtctacaccgtgacgttcaaggcccggctgcaggagccacgggcg
gcccgccaggccgctgcagaggaggaccctgggacagcactcccggtggaagggggcggt
agtgatagtggtagtgttctggaggtagacacacgagaggtggtgacctctaacctctct
agcctaacagagagctatgatgatgacgtcatcaccagggctcctactgtgctggagggg
gatgacgtcatcgtgataactgtcaacaggacggacattaagcactgtatctacgtagag
gaccctgaacctgagcctccgactgaacctcctcccacctcccctcctcctaacaccacc
acctccccgggtatccctggagacgtcccccacaggaagggagagtacccagaggacctg
ttcacagtggaccagaggaggcagggctgggtgaccctccacatcctgggcatggtctac
atgttcgtctctctcgccatcgtctgtgacgagttcttcgtcccggcgctcggcgtcatc
accgtgaagctcgacatctccgacgacgtcgccggggcaaccttcatggctgcaggaggc
tccgcccccgaactgttcacgtctctgattggcgtgttcatctcccatagcaacgtgggc
atcgggacaatcgtggggtcagcggtgtttaacatcctgtttgtcatcgggatgtgtgcc
atcttctccagggagatgctccacctcacctggtggcccctgttcagagacgtctccttc
tacatcatagatctgatcatgctgatcgtgttcttcttggacaacaccatcatgtggtgg
gagagcgtaatgctggtgtcgggttacgtggcctacgtctgcttcatgaagttcaacgtg
cagatcgaacacttcgtcaagacgcagatcaacaaacacaagagcatcgtcaagatcatc
atgccagaggaggaggaggagaaggaacccaagaagcagaacagtggacatccaccacct
gatccaccccaaaacaatgtttcaccagaacccaaaccacaacctcaagactcaccccag
aagagagacagagaaaaactgaaggtgaagcccactctccagagaggaggcagtaatgcg
tctctccacaacagcaccaacagaaacaccatcttccagttgatgatccacacactggac
ccactgggagaagctggacctgagaagactgagcaggccgaaccctcgacctcccagaca
acacctaaagaagaggagaaaccaggcccgtcagagactcagacggaccaggggccagcg
ggcgcaggggggtccgacggctcagacagcggtgagggggacgagagtgaagaagagagc
gaggatgaggaagacgaggatgatgaagacgaagaggacgatgaggaaaataaagatgaa
gaagagggtgaagagaacgaggaacctctgtcgttagaatggccagacaccagacgtaaa
caggccacatatctttttctccttccgatagtgttccctctgtggctcactgtgcccgac
gtacgcaacccggcttccagaaaatactttgccatgacgtttattggttccatcacgtgg
atcgctgtgttctcctatctaatggtctggtgggcacatcaggtgggtgagaccataggc
atctcagaggagatcatgggcctgaccatcctggcagcgggcacctccatccctgacctc
atcactagtgtcatcgtggcccggaaaggactgggagacatggctgtgtccagctcagtg
ggatccaacatcttcgatatcactatgggcctgcctgtcccatggttgatcttctcggcg
atgcaaggcggcgtaccggtggcggtgaactccaacggtctgttctgtgccatcgtgctc
ctcttcgtcatgctcctcttcgtcatcgtcagcatcgcggcgtgtcggtggaagatgagc
cgcgttctgggcctcaccatgttcatgctttacttcgtgtttctggtgctcagcgtgatg
ctggaagaccgtattattatctgccccgtctccatctga
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