Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139411773
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Entry
139411773 CDS
T10872
Name
(RefSeq) E3 ubiquitin-protein ligase arih1 isoform X1
KO
K11968
ariadne-1 [EC:
2.3.2.31
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
139411773
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ocla04121
]
139411773
Enzymes [BR:
ocla01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
139411773
Ubiquitin system [BR:
ocla04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
139411773
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IBR
UBA_ARI1
IBR_1
IBR_2
Ariadne
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_5
zf-RING_14
zf-RING_UBOX
zf-C3HC4_4
RING_XB3-XBAT31
Motif
Other DBs
NCBI-GeneID:
139411773
NCBI-ProteinID:
XP_071014607
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Position
6:complement(88482121..88508012)
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AA seq
535 aa
AA seq
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MDSDEGYNYEFDEEEEECSEDSAEEDPEDDTLEVELDDPVVAGGERDECGETGGSGLGPG
QDEEDYRFEVLTAEQILQHMVECIREVNDVIQNPATITRILLSHFNWDKEKLMERYFDGN
LDKLFSECHVINPSKKSRTRLMNTRSSAQDLPCQICYLNYPNSYFTGLECGHKFCMQCWG
DYLTTKIIEEGMGQTISCPAHSCDILVDDNTVMRLITESKVKLKYQHLITNSFVECNRLL
KWCPAPDCHHVVKVQYPDAKPVRCTCGRQFCFNCGENWHDPVKCKWLRKWIKKCDDDSET
SNWIAANTRECPKCHVTIEKDGGCNHMVCRNQSCKAEFCWVCLGPWEPHGSAWYNCNRYN
EDDAKAARDAQEVTALSLLLLLQRSRAALQRYLFYCNRYMNHMQSLRFEHKLYAGVKAKM
EEMQHHNMSWIEVQFLKKAVDVLCQCRSTLMFTYVFAFYLKKNNQSIIFENNQADLENAT
EVLSGYLERDISQDSLQDIKQKVQDKYRYCESRRRVLLQHVHEGYEKDLWEYIED
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atggactcagacgaagggtacaattatgaattcgacgaggaggaagaggaatgcagcgaa
gacagcgccgaggaggatcccgaagacgacaccctggaagtggagttggatgatcctgtt
gtggccggtggagaacgagatgaatgtggggagaccggaggcagtggcctagggcccggt
caagacgaagaggattatcggttcgaggttttgactgctgaacagatccttcagcatatg
gtcgagtgtatcagggaggtcaatgatgtcatccagaaccctgcaacgataacaagaata
cttcttagtcacttcaattgggacaaagagaaactgatggaaagatattttgatgggaac
cttgacaaattgttctcggaatgccatgtcatcaaccccagtaagaagtcgaggacgcgg
ctgatgaacacgaggtcctctgctcaggatcttccctgtcagatctgctacctgaactac
ccaaactcgtacttcactggcctggagtgtggacacaagttctgcatgcagtgttggggt
gactacttgactaccaaaatcattgaggaggggatgggacagacaatttcctgcccggct
cacagctgtgatatattggtggacgacaacacagtcatgagactgatcacagagtccaag
gtgaagttgaagtaccaacacttgattaccaatagttttgtagagtgcaatcggctgtta
aaatggtgcccggcgccagactgtcatcacgtagtcaaagtccagtacccagatgctaag
cctgtgagatgcacatgtggccggcagttctgcttcaattgtggcgagaactggcatgat
cccgtcaagtgtaagtggttgaggaaatggatcaagaagtgtgacgatgacagcgagacg
tctaactggatcgcagccaatacacgggagtgccccaaatgccacgtgaccattgagaag
gacggcggctgcaaccacatggtgtgtcggaaccagagctgcaaggcagagttctgctgg
gtctgcctggggccctgggaaccacacggctctgcctggtacaactgcaaccgctacaat
gaggatgatgccaaggcagcgagggacgcccaagaggtaacagcgttgtccctcctcctc
ctcctccagcggtccagggcagccctgcagaggtacctgttctactgcaaccgttacatg
aaccacatgcagtcgctgcgcttcgagcacaagctgtacgccggggtcaaggccaagatg
gaggagatgcagcatcacaacatgtcctggatcgaggtgcagttcctgaagaaggccgtg
gacgtgctgtgtcagtgtcgctccacactcatgttcacctacgtcttcgccttctacctc
aagaagaacaaccagtccatcatctttgagaacaatcaggctgacttggagaacgctacg
gaggttctgtctggatatctggagcgggacatctcccaggactctctgcaggacatcaaa
cagaaagtacaggacaagtacagatactgtgagagtcggcgtcgggtgctgctgcaacat
gtgcatgagggctatgagaaggacctctgggaatacatagaagattaa
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